PAO, AB250234.1-PAO.m1 (mRNA) Malus x domestica

Transcript Overview


Name	PAO
Unique Name	AB250234.1-PAO.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	polyamine oxidase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
AB250234.1-PAO.m1-cds1	AB250234.1-PAO.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PAO	AB250234.1-PAO.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	112293230
nuccore	AB250234.1

Alignments

Feature Name	Type	Location	Analysis
AB250234	region	AB250234:46..1539+	NCBI Rosaceae gene and mRNA sequences
chr2	chromosome	chr2:35038352..35046165+	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr2	chromosome	chr2:38697608..38705421-	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at AB250234:46..1539+
coding sequence from alignment at AB250234:46..1539+

mRNA sequence

>AB250234.1-PAO.m1 ID=AB250234.1-PAO.m1; Name=PAO; organism=Malus x domestica; type=mRNA; length=1494bp
atggattccccttctagctcctccgtcatcattgtcggcgccggagtctc
cggtttatcggcggcgaaggtattgatcgagaacggcgtggaggacgtgg
tgattctggaagcttccgaccgtataggaggcaggatccgaaagcaggat
ttcggcggtgtatcggtggagcttggcgccggttggatagtcggagtcgg
aggcagagagttgaacccggtcttggacctcgccctgaaatcgaatctcc
gcactatcttctccgattacagtaatgctcgctacaacatctacgatcgc
agcgggaagatatttcctagaggactcgtggaagagacgtacaagaagga
agtggagtcggcggtgcagaagctgaagaagctggaagccggcggcggcg
atttctcaaatgtcaccgaaccgcccactacacagaaaacgccgatagag
ctcgccattgatttcaccctacacgattttgagatgccagaagtggagcc
catatcaacctttttggattatggagaacgagagtttttggttgcggatg
agagagggtatgagcatatgctgtacaaaatggccgaagatgttctcttt
acatctgagggtaaactgttggacagtcgtctcaagttcaataaggttgt
tcgggagttgcagcactcaagaaacggcgttacggtaatgacggaggatg
gttgcgtcttccaagcaaattacatgattttgtcagttagcattggtgtt
ctccaaagcaacctcattgctttcaatccacccttacccaggtggaaaac
agaggctatacagaaatgtgatgtgattgtatacacgaagatctttctga
agttcccttataagttctggccttgtggaccaggacaagagttcttcctc
tatgcccatgagaggagaggctactacacattttggcagcacatggaaaa
tgcttatcctggatccaatatgctggtcgtgacgttgacgaatggggaat
caaagcgtgtggaagctcagtctgataaggagactttgaatgaagccatg
gcggccctcaaggacatgtttgggcctgacattccggaagctactgatat
acttgtacctcgctggtggaacaatagattccagcgcggcagctacagta
actaccctatgatctctgataaccaattcgttcatgacatcaagaaccca
gtaggccgtctcttcttcaccggggaacacacaagtgaaaaatttagcgg
ttatgtccacggcgggcaccttgcaggtattgagactggcaaagcgttgc
tggaagaaatggaaaaggagaaggaaaggacaagtgagagtgaaaaccaa
gtgtttttgttagaacccttgcttgcattgactggttcattaagtttgac
acaaaacgacgctgtctcaagtctcaaatgcgatattcctaaaagatcat
atttaagtggcaaagttggcatcgcggagctatgttatgactag

protein sequence of PAO

>AB250234.1-PAO.p1 ID=AB250234.1-PAO.p1; Name=PAO; organism=Malus x domestica; type=polypeptide; length=497bp
MDSPSSSSVIIVGAGVSGLSAAKVLIENGVEDVVILEASDRIGGRIRKQD
FGGVSVELGAGWIVGVGGRELNPVLDLALKSNLRTIFSDYSNARYNIYDR
SGKIFPRGLVEETYKKEVESAVQKLKKLEAGGGDFSNVTEPPTTQKTPIE
LAIDFTLHDFEMPEVEPISTFLDYGEREFLVADERGYEHMLYKMAEDVLF
TSEGKLLDSRLKFNKVVRELQHSRNGVTVMTEDGCVFQANYMILSVSIGV
LQSNLIAFNPPLPRWKTEAIQKCDVIVYTKIFLKFPYKFWPCGPGQEFFL
YAHERRGYYTFWQHMENAYPGSNMLVVTLTNGESKRVEAQSDKETLNEAM
AALKDMFGPDIPEATDILVPRWWNNRFQRGSYSNYPMISDNQFVHDIKNP
VGRLFFTGEHTSEKFSGYVHGGHLAGIETGKALLEEMEKEKERTSESENQ
VFLLEPLLALTGSLSLTQNDAVSSLKCDIPKRSYLSGKVGIAELCYD

mRNA from alignment at AB250234:46..1539+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>AB250234.1-PAO.m1 ID=AB250234.1-PAO.m1; Name=PAO; organism=Malus x domestica; type=mRNA; length=1494bp; location=Sequence derived from: AB250234:46..1539+ (Malus x domestica
atggattccccttctagctcctccgtcatcattgtcggcgccggagtctc
cggtttatcggcggcgaaggtattgatcgagaacggcgtggaggacgtgg
tgattctggaagcttccgaccgtataggaggcaggatccgaaagcaggat
ttcggcggtgtatcggtggagcttggcgccggttggatagtcggagtcgg
aggcagagagttgaacccggtcttggacctcgccctgaaatcgaatctcc
gcactatcttctccgattacagtaatgctcgctacaacatctacgatcgc
agcgggaagatatttcctagaggactcgtggaagagacgtacaagaagga
agtggagtcggcggtgcagaagctgaagaagctggaagccggcggcggcg
atttctcaaatgtcaccgaaccgcccactacacagaaaacgccgatagag
ctcgccattgatttcaccctacacgattttgagatgccagaagtggagcc
catatcaacctttttggattatggagaacgagagtttttggttgcggatg
agagagggtatgagcatatgctgtacaaaatggccgaagatgttctcttt
acatctgagggtaaactgttggacagtcgtctcaagttcaataaggttgt
tcgggagttgcagcactcaagaaacggcgttacggtaatgacggaggatg
gttgcgtcttccaagcaaattacatgattttgtcagttagcattggtgtt
ctccaaagcaacctcattgctttcaatccacccttacccaggtggaaaac
agaggctatacagaaatgtgatgtgattgtatacacgaagatctttctga
agttcccttataagttctggccttgtggaccaggacaagagttcttcctc
tatgcccatgagaggagaggctactacacattttggcagcacatggaaaa
tgcttatcctggatccaatatgctggtcgtgacgttgacgaatggggaat
caaagcgtgtggaagctcagtctgataaggagactttgaatgaagccatg
gcggccctcaaggacatgtttgggcctgacattccggaagctactgatat
acttgtacctcgctggtggaacaatagattccagcgcggcagctacagta
actaccctatgatctctgataaccaattcgttcatgacatcaagaaccca
gtaggccgtctcttcttcaccggggaacacacaagtgaaaaatttagcgg
ttatgtccacggcgggcaccttgcaggtattgagactggcaaagcgttgc
tggaagaaatggaaaaggagaaggaaaggacaagtgagagtgaaaaccaa
gtgtttttgttagaacccttgcttgcattgactggttcattaagtttgac
acaaaacgacgctgtctcaagtctcaaatgcgatattcctaaaagatcat
atttaagtggcaaagttggcatcgcggagctatgttatgactag

Coding sequence (CDS) from alignment at AB250234:46..1539+

>AB250234.1-PAO.m1 ID=AB250234.1-PAO.m1; Name=PAO; organism=Malus x domestica; type=CDS; length=1494bp; location=Sequence derived from: AB250234:46..1539+ (Malus x domestica
atggattccccttctagctcctccgtcatcattgtcggcgccggagtctc
cggtttatcggcggcgaaggtattgatcgagaacggcgtggaggacgtgg
tgattctggaagcttccgaccgtataggaggcaggatccgaaagcaggat
ttcggcggtgtatcggtggagcttggcgccggttggatagtcggagtcgg
aggcagagagttgaacccggtcttggacctcgccctgaaatcgaatctcc
gcactatcttctccgattacagtaatgctcgctacaacatctacgatcgc
agcgggaagatatttcctagaggactcgtggaagagacgtacaagaagga
agtggagtcggcggtgcagaagctgaagaagctggaagccggcggcggcg
atttctcaaatgtcaccgaaccgcccactacacagaaaacgccgatagag
ctcgccattgatttcaccctacacgattttgagatgccagaagtggagcc
catatcaacctttttggattatggagaacgagagtttttggttgcggatg
agagagggtatgagcatatgctgtacaaaatggccgaagatgttctcttt
acatctgagggtaaactgttggacagtcgtctcaagttcaataaggttgt
tcgggagttgcagcactcaagaaacggcgttacggtaatgacggaggatg
gttgcgtcttccaagcaaattacatgattttgtcagttagcattggtgtt
ctccaaagcaacctcattgctttcaatccacccttacccaggtggaaaac
agaggctatacagaaatgtgatgtgattgtatacacgaagatctttctga
agttcccttataagttctggccttgtggaccaggacaagagttcttcctc
tatgcccatgagaggagaggctactacacattttggcagcacatggaaaa
tgcttatcctggatccaatatgctggtcgtgacgttgacgaatggggaat
caaagcgtgtggaagctcagtctgataaggagactttgaatgaagccatg
gcggccctcaaggacatgtttgggcctgacattccggaagctactgatat
acttgtacctcgctggtggaacaatagattccagcgcggcagctacagta
actaccctatgatctctgataaccaattcgttcatgacatcaagaaccca
gtaggccgtctcttcttcaccggggaacacacaagtgaaaaatttagcgg
ttatgtccacggcgggcaccttgcaggtattgagactggcaaagcgttgc
tggaagaaatggaaaaggagaaggaaaggacaagtgagagtgaaaaccaa
gtgtttttgttagaacccttgcttgcattgactggttcattaagtttgac
acaaaacgacgctgtctcaagtctcaaatgcgatattcctaaaagatcat
atttaagtggcaaagttggcatcgcggagctatgttatgactag