XTH1, DQ279095.1-XTH1.m1 (mRNA) Rosa x borboniana

Transcript Overview
NameXTH1
Unique NameDQ279095.1-XTH1.m1
TypemRNA
OrganismRosa x borboniana ()
Sourcegenbank
Productxyloglucan endotransglucosylase hydrolase
Genbank NoteRbXTH1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
DQ279095.1-XTH1.m1-cds1DQ279095.1-XTH1.m1-cds1Rosa x borbonianaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
XTH1DQ279095.1-XTH1.p1Rosa x borbonianapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI82621244
nuccoreDQ279095.1
Alignments
Feature NameTypeLocationAnalysis
DQ279095 region DQ279095:42..926+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>DQ279095.1-XTH1.m1 ID=DQ279095.1-XTH1.m1; Name=XTH1; organism=Rosa x borboniana; type=mRNA; length=885bp
atggcttcttacaagcaatggactctgctcttgagcttagtgcttatggt
ctctgcaacaatggcagctcccccaaggaggcctgtggctgtaccctttg
gaagaaactaccagcccacctgggcttttgaccacatcaagtactacaat
ggtggcaatgagattcagctccaccttgacaaatacacaggtacgggttt
ccaatccaaaggttcatacttgtttggccatttccatatgcaaatcaaac
tggtccctggtgactctgctggaactgttactgctttctatctgtcttct
acaaactcagagcacgatgagatcgacttcgagttcttggggaacagaac
agggcagccctacattttgcagactaatgtcttcaccggaggaaagggtg
accgagaacagaggatcttcctctggttcgacccaaccaaagagtaccac
tcctactctgtgctctggaatctctaccagattgtattcttagtggatga
catcccaatccgagtcttcaagaacagcaaagacttgggagtgaaattcc
cattcaaccaacccatgaagctctactctagtctgtggaacgcagacgat
tgggccaccaggggaggactcgagaagactgactggtctaaggctccctt
cgtggccacctataggggcttccatatcgacggctgcgaggcgtcggtgg
aagccaagtactgtgccactcagggtaagaggtggtgggatcagaaggag
ttccaggacctcgatgcttatcaatggaggaggctgaggtgggttagaca
gaggttcaccatctacaactactgcactgacaggactaggtaccctagtc
tccctgccgagtgcaagagagacagagacatatga
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protein sequence of XTH1

>DQ279095.1-XTH1.p1 ID=DQ279095.1-XTH1.p1; Name=XTH1; organism=Rosa x borboniana; type=polypeptide; length=294bp
MASYKQWTLLLSLVLMVSATMAAPPRRPVAVPFGRNYQPTWAFDHIKYYN
GGNEIQLHLDKYTGTGFQSKGSYLFGHFHMQIKLVPGDSAGTVTAFYLSS
TNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIFLWFDPTKEYH
SYSVLWNLYQIVFLVDDIPIRVFKNSKDLGVKFPFNQPMKLYSSLWNADD
WATRGGLEKTDWSKAPFVATYRGFHIDGCEASVEAKYCATQGKRWWDQKE
FQDLDAYQWRRLRWVRQRFTIYNYCTDRTRYPSLPAECKRDRDI
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mRNA from alignment at DQ279095:42..926+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>DQ279095.1-XTH1.m1 ID=DQ279095.1-XTH1.m1; Name=XTH1; organism=Rosa x borboniana; type=mRNA; length=885bp; location=Sequence derived from: DQ279095:42..926+ (Rosa x borboniana
atggcttcttacaagcaatggactctgctcttgagcttagtgcttatggt
ctctgcaacaatggcagctcccccaaggaggcctgtggctgtaccctttg
gaagaaactaccagcccacctgggcttttgaccacatcaagtactacaat
ggtggcaatgagattcagctccaccttgacaaatacacaggtacgggttt
ccaatccaaaggttcatacttgtttggccatttccatatgcaaatcaaac
tggtccctggtgactctgctggaactgttactgctttctatctgtcttct
acaaactcagagcacgatgagatcgacttcgagttcttggggaacagaac
agggcagccctacattttgcagactaatgtcttcaccggaggaaagggtg
accgagaacagaggatcttcctctggttcgacccaaccaaagagtaccac
tcctactctgtgctctggaatctctaccagattgtattcttagtggatga
catcccaatccgagtcttcaagaacagcaaagacttgggagtgaaattcc
cattcaaccaacccatgaagctctactctagtctgtggaacgcagacgat
tgggccaccaggggaggactcgagaagactgactggtctaaggctccctt
cgtggccacctataggggcttccatatcgacggctgcgaggcgtcggtgg
aagccaagtactgtgccactcagggtaagaggtggtgggatcagaaggag
ttccaggacctcgatgcttatcaatggaggaggctgaggtgggttagaca
gaggttcaccatctacaactactgcactgacaggactaggtaccctagtc
tccctgccgagtgcaagagagacagagacatatga
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Coding sequence (CDS) from alignment at DQ279095:42..926+

>DQ279095.1-XTH1.m1 ID=DQ279095.1-XTH1.m1; Name=XTH1; organism=Rosa x borboniana; type=CDS; length=885bp; location=Sequence derived from: DQ279095:42..926+ (Rosa x borboniana
atggcttcttacaagcaatggactctgctcttgagcttagtgcttatggt
ctctgcaacaatggcagctcccccaaggaggcctgtggctgtaccctttg
gaagaaactaccagcccacctgggcttttgaccacatcaagtactacaat
ggtggcaatgagattcagctccaccttgacaaatacacaggtacgggttt
ccaatccaaaggttcatacttgtttggccatttccatatgcaaatcaaac
tggtccctggtgactctgctggaactgttactgctttctatctgtcttct
acaaactcagagcacgatgagatcgacttcgagttcttggggaacagaac
agggcagccctacattttgcagactaatgtcttcaccggaggaaagggtg
accgagaacagaggatcttcctctggttcgacccaaccaaagagtaccac
tcctactctgtgctctggaatctctaccagattgtattcttagtggatga
catcccaatccgagtcttcaagaacagcaaagacttgggagtgaaattcc
cattcaaccaacccatgaagctctactctagtctgtggaacgcagacgat
tgggccaccaggggaggactcgagaagactgactggtctaaggctccctt
cgtggccacctataggggcttccatatcgacggctgcgaggcgtcggtgg
aagccaagtactgtgccactcagggtaagaggtggtgggatcagaaggag
ttccaggacctcgatgcttatcaatggaggaggctgaggtgggttagaca
gaggttcaccatctacaactactgcactgacaggactaggtaccctagtc
tccctgccgagtgcaagagagacagagacatatga
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