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Transcript Overview
| Name | ACS5B |
|---|
| Unique Name | AB034992.1-ACS5B.m1 |
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| Type | mRNA |
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| Organism | Malus x domestica (Apple) |
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| Source | genbank |
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| Product | 1-aminocyclopropane-1-carboxylate synthase |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| AB034992.1-ACS5B.m1-cds1 | AB034992.1-ACS5B.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ACS5B | AB034992.1-ACS5B.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| AB034992 |
region |
AB034992:81..1544+ |
NCBI Rosaceae gene and mRNA sequences |
| Chr14 |
chromosome |
Chr14:17953440..17955789- |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
| chr2 |
chromosome |
chr2:33731213..33733562- |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
| chr2 |
chromosome |
chr2:37200650..37202999+ |
Malus x domestica Whole Genome v1.0p Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >AB034992.1-ACS5B.m1 ID=AB034992.1-ACS5B.m1; Name=ACS5B; organism=Malus x domestica; type=mRNA; length=1464bp
atggggtttactttgagcaaccaacagcaactgttgtctaagatagcaac
aagcaatggccacggcgaaaactctccatactttgatggctggaaggctt
atgacagtgatccttttcaccccaccaagaaccctaatggggttatccag
atgggtcttgcagaaaatgaaatgtgttttgatttgatccaagagtgggt
tctgaacaatccagaagcctccatttgcacagcagcaggagtaaatgaat
tcaaggacatagccatctttcaggattatcatggattgccagtattcaga
aatgctgttgcaaactttatgggaaaagtgagaggaaatcgtgtcacatt
cgacgccgaccggattgttatgagcggaggagctaccggagctcatgaga
cgatcgctttttgcttggctgatcctggggatgcatttctggtgcctgtt
ccttattatccaggttttgaccgagatttggggtggcgaacgggagtgca
actgatgccagttgcctgtgacagctccaacaatttcaaagtcaccagag
cagctttggaagctgcctatgagaaggctcagaaggcaaacatcagagta
aagggcttgctcattaccaacccctcaaatccgttgggcactgtccttga
cagagacaccctcagaagtctagtgacattcatcaacgaaaagaaaatcc
acctagtgtgcgatgaaatctacgctgccaccgtgttcagccagccaagt
ttcataagcatagccgagatcatagaggaaaacatcgaatgcaaccgcaa
ccttattcacattgtgtacagtctttctaaggacatggggttccctggct
tcagagttggcattgtatattcctacaatgatgatgtcgttaattgtgcg
cgaaagatgtcaagttttggattggtttcgacacaaactcagcatctgat
tgcatcaatgttgtcagacaatgaatttgtcgagaggtttatagcacaaa
gtgctaaaaggctaaaagcaaggcacatgcgcttcacaatggagcttgat
caagtcggcacaagctgcttgaatagcaatggtggtcttttcgtatggat
ggacttgcgtaggctgctcaaggagcagacgttcgaagctgagatggtgt
tgtggcacacgataatccatgaagttaagctcaatgtgtcaccaggttcg
tcgtttcattgccccgagccaggttggttcagagtttgctttgccaacat
ggatgacaagaccatggaaattgctttgacacgaatccgaaactttgtgg
ctcaatacaaggagccaattgcaccgaggaagaacaacaggtactggcaa
agcaacctgaggctgagctttcagtctcggcgaatggatgacatcatgat
gtctccgtgcatgatgtcacctcattcaccgatacctcaatcgcctcttg
ttcgagccacttag back to topprotein sequence of ACS5B >AB034992.1-ACS5B.p1 ID=AB034992.1-ACS5B.p1; Name=ACS5B; organism=Malus x domestica; type=polypeptide; length=487bp
MGFTLSNQQQLLSKIATSNGHGENSPYFDGWKAYDSDPFHPTKNPNGVIQ
MGLAENEMCFDLIQEWVLNNPEASICTAAGVNEFKDIAIFQDYHGLPVFR
NAVANFMGKVRGNRVTFDADRIVMSGGATGAHETIAFCLADPGDAFLVPV
PYYPGFDRDLGWRTGVQLMPVACDSSNNFKVTRAALEAAYEKAQKANIRV
KGLLITNPSNPLGTVLDRDTLRSLVTFINEKKIHLVCDEIYAATVFSQPS
FISIAEIIEENIECNRNLIHIVYSLSKDMGFPGFRVGIVYSYNDDVVNCA
RKMSSFGLVSTQTQHLIASMLSDNEFVERFIAQSAKRLKARHMRFTMELD
QVGTSCLNSNGGLFVWMDLRRLLKEQTFEAEMVLWHTIIHEVKLNVSPGS
SFHCPEPGWFRVCFANMDDKTMEIALTRIRNFVAQYKEPIAPRKNNRYWQ
SNLRLSFQSRRMDDIMMSPCMMSPHSPIPQSPLVRAT back to topmRNA from alignment at AB034992:81..1544+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >AB034992.1-ACS5B.m1 ID=AB034992.1-ACS5B.m1; Name=ACS5B; organism=Malus x domestica; type=mRNA; length=1464bp; location=Sequence derived from: AB034992:81..1544+ (Malus x domestica
atggggtttactttgagcaaccaacagcaactgttgtctaagatagcaac
aagcaatggccacggcgaaaactctccatactttgatggctggaaggctt
atgacagtgatccttttcaccccaccaagaaccctaatggggttatccag
atgggtcttgcagaaaatgaaatgtgttttgatttgatccaagagtgggt
tctgaacaatccagaagcctccatttgcacagcagcaggagtaaatgaat
tcaaggacatagccatctttcaggattatcatggattgccagtattcaga
aatgctgttgcaaactttatgggaaaagtgagaggaaatcgtgtcacatt
cgacgccgaccggattgttatgagcggaggagctaccggagctcatgaga
cgatcgctttttgcttggctgatcctggggatgcatttctggtgcctgtt
ccttattatccaggttttgaccgagatttggggtggcgaacgggagtgca
actgatgccagttgcctgtgacagctccaacaatttcaaagtcaccagag
cagctttggaagctgcctatgagaaggctcagaaggcaaacatcagagta
aagggcttgctcattaccaacccctcaaatccgttgggcactgtccttga
cagagacaccctcagaagtctagtgacattcatcaacgaaaagaaaatcc
acctagtgtgcgatgaaatctacgctgccaccgtgttcagccagccaagt
ttcataagcatagccgagatcatagaggaaaacatcgaatgcaaccgcaa
ccttattcacattgtgtacagtctttctaaggacatggggttccctggct
tcagagttggcattgtatattcctacaatgatgatgtcgttaattgtgcg
cgaaagatgtcaagttttggattggtttcgacacaaactcagcatctgat
tgcatcaatgttgtcagacaatgaatttgtcgagaggtttatagcacaaa
gtgctaaaaggctaaaagcaaggcacatgcgcttcacaatggagcttgat
caagtcggcacaagctgcttgaatagcaatggtggtcttttcgtatggat
ggacttgcgtaggctgctcaaggagcagacgttcgaagctgagatggtgt
tgtggcacacgataatccatgaagttaagctcaatgtgtcaccaggttcg
tcgtttcattgccccgagccaggttggttcagagtttgctttgccaacat
ggatgacaagaccatggaaattgctttgacacgaatccgaaactttgtgg
ctcaatacaaggagccaattgcaccgaggaagaacaacaggtactggcaa
agcaacctgaggctgagctttcagtctcggcgaatggatgacatcatgat
gtctccgtgcatgatgtcacctcattcaccgatacctcaatcgcctcttg
ttcgagccacttag back to topCoding sequence (CDS) from alignment at AB034992:81..1544+ >AB034992.1-ACS5B.m1 ID=AB034992.1-ACS5B.m1; Name=ACS5B; organism=Malus x domestica; type=CDS; length=1464bp; location=Sequence derived from: AB034992:81..1544+ (Malus x domestica
atggggtttactttgagcaaccaacagcaactgttgtctaagatagcaac
aagcaatggccacggcgaaaactctccatactttgatggctggaaggctt
atgacagtgatccttttcaccccaccaagaaccctaatggggttatccag
atgggtcttgcagaaaatgaaatgtgttttgatttgatccaagagtgggt
tctgaacaatccagaagcctccatttgcacagcagcaggagtaaatgaat
tcaaggacatagccatctttcaggattatcatggattgccagtattcaga
aatgctgttgcaaactttatgggaaaagtgagaggaaatcgtgtcacatt
cgacgccgaccggattgttatgagcggaggagctaccggagctcatgaga
cgatcgctttttgcttggctgatcctggggatgcatttctggtgcctgtt
ccttattatccaggttttgaccgagatttggggtggcgaacgggagtgca
actgatgccagttgcctgtgacagctccaacaatttcaaagtcaccagag
cagctttggaagctgcctatgagaaggctcagaaggcaaacatcagagta
aagggcttgctcattaccaacccctcaaatccgttgggcactgtccttga
cagagacaccctcagaagtctagtgacattcatcaacgaaaagaaaatcc
acctagtgtgcgatgaaatctacgctgccaccgtgttcagccagccaagt
ttcataagcatagccgagatcatagaggaaaacatcgaatgcaaccgcaa
ccttattcacattgtgtacagtctttctaaggacatggggttccctggct
tcagagttggcattgtatattcctacaatgatgatgtcgttaattgtgcg
cgaaagatgtcaagttttggattggtttcgacacaaactcagcatctgat
tgcatcaatgttgtcagacaatgaatttgtcgagaggtttatagcacaaa
gtgctaaaaggctaaaagcaaggcacatgcgcttcacaatggagcttgat
caagtcggcacaagctgcttgaatagcaatggtggtcttttcgtatggat
ggacttgcgtaggctgctcaaggagcagacgttcgaagctgagatggtgt
tgtggcacacgataatccatgaagttaagctcaatgtgtcaccaggttcg
tcgtttcattgccccgagccaggttggttcagagtttgctttgccaacat
ggatgacaagaccatggaaattgctttgacacgaatccgaaactttgtgg
ctcaatacaaggagccaattgcaccgaggaagaacaacaggtactggcaa
agcaacctgaggctgagctttcagtctcggcgaatggatgacatcatgat
gtctccgtgcatgatgtcacctcattcaccgatacctcaatcgcctcttg
ttcgagccacttag back to top
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