CIPK10, KT336292.1-CIPK10.m1 (mRNA) Malus domestica

Transcript Overview


Name	CIPK10
Unique Name	KT336292.1-CIPK10.m1
Type	mRNA
Organism	Malus domestica ()
Source	genbank
Product	CBL-interacting serine/threonine-protein kinase 10

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KT336292.1-CIPK10.m1-cds1	KT336292.1-CIPK10.m1-cds1	Malus domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CIPK10	KT336292.1-CIPK10.p1	Malus domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	965433993
nuccore	KT336292.1

Alignments

Feature Name	Type	Location	Analysis
KT336292	region	KT336292:1..1401+	NCBI Rosaceae gene and mRNA sequences
Chr04	chromosome	Chr04:26321511..26322905+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at KT336292:1..1401+
coding sequence from alignment at KT336292:1..1401+

mRNA sequence

>KT336292.1-CIPK10.m1 ID=KT336292.1-CIPK10.m1; Name=CIPK10; organism=Malus domestica; type=mRNA; length=1401bp
atggaaaacaaaggaagcgtgttgatgcagcggtatgaattggggcgaat
actaggccaaggaacctttgccaaggttcactatgcgaggaatcttaaaa
ccggcatgagtgtggcgattaagataattgataaagagagggtcttgaag
gtcggaatgattgatcagattaagcgagaaatttctgtcatgcgactgat
tagacacccgaatgttgtggagctttatgaggtaatggccagcaaaacca
agatttactttgtcatggagtatgtcaaaggtggtgagctcttcaacaag
gtttccaaaggcaagctaaaggaggatgttgctaggaaatattttcagca
gctcatcagtgctgttgattactgccatagtcgaggagtctgccaccgag
atttgaaaccagaaaacctacttttggatgagaatgaggatctaaaggtt
tcagatttcggattgagtgcccttggtgaatctaagcggcaagatggttt
gcttcatacaacttgtggaacccctgcatacgttgcgccagaagtaataa
acaggaaaggatatgatggtgccaaagctgacatttggtcttgtggagtg
gtattgtatgttctattggctggctatctcccatttcacgattcaaatct
gatggagatgtataagaagattggtaagggcgagttcaaattccctaact
ggttttcgccagaagtacgcaggttgctgtcacagatcatggaccccaat
ccaaatactcgggtatccattgccaaaattatgcagagttcttggttccg
caagggtttggtccaaaaactggaaattgctgaggtaccgatgaaggagc
catcccctctggatgttgatgcaatttttggaccaaatgaagacagcaat
tcttctgtcgagtcaaggcaagaattatcaaagccatctaacttgaatgc
ttttgatatcatctcctactccgaaggctttgacttgtctggattgtttg
agcagacagaccagaaaaaggaagtgcggtttacatccaacaaaacggca
tccaccatcatctctaagctggaggacattgccaagcgtctgaagctaaa
aataaagaagcgggatggaggattgttgaaaatggaagggtccacggaag
gcaggaagggggtgctgagcattgacaccgagatatttgaaatcaccccg
acttttcatctggtggaagtgaagaagtctagtggagatacattggagta
tcagaaggtcattaagaaagatatcagaccagctctgaaggacattgttt
ggacttggcaaggggcggagcagcagcagcagcagcagcaagaagaagaa
gagccaccacaactagtgcaggagctgccgcagggacaagaacacacgta
g

protein sequence of CIPK10

>KT336292.1-CIPK10.p1 ID=KT336292.1-CIPK10.p1; Name=CIPK10; organism=Malus domestica; type=polypeptide; length=466bp
MENKGSVLMQRYELGRILGQGTFAKVHYARNLKTGMSVAIKIIDKERVLK
VGMIDQIKREISVMRLIRHPNVVELYEVMASKTKIYFVMEYVKGGELFNK
VSKGKLKEDVARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDENEDLKV
SDFGLSALGESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGV
VLYVLLAGYLPFHDSNLMEMYKKIGKGEFKFPNWFSPEVRRLLSQIMDPN
PNTRVSIAKIMQSSWFRKGLVQKLEIAEVPMKEPSPLDVDAIFGPNEDSN
SSVESRQELSKPSNLNAFDIISYSEGFDLSGLFEQTDQKKEVRFTSNKTA
STIISKLEDIAKRLKLKIKKRDGGLLKMEGSTEGRKGVLSIDTEIFEITP
TFHLVEVKKSSGDTLEYQKVIKKDIRPALKDIVWTWQGAEQQQQQQQEEE
EPPQLVQELPQGQEHT

mRNA from alignment at KT336292:1..1401+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KT336292.1-CIPK10.m1 ID=KT336292.1-CIPK10.m1; Name=CIPK10; organism=Malus domestica; type=mRNA; length=1401bp; location=Sequence derived from: KT336292:1..1401+ (Malus domestica
atggaaaacaaaggaagcgtgttgatgcagcggtatgaattggggcgaat
actaggccaaggaacctttgccaaggttcactatgcgaggaatcttaaaa
ccggcatgagtgtggcgattaagataattgataaagagagggtcttgaag
gtcggaatgattgatcagattaagcgagaaatttctgtcatgcgactgat
tagacacccgaatgttgtggagctttatgaggtaatggccagcaaaacca
agatttactttgtcatggagtatgtcaaaggtggtgagctcttcaacaag
gtttccaaaggcaagctaaaggaggatgttgctaggaaatattttcagca
gctcatcagtgctgttgattactgccatagtcgaggagtctgccaccgag
atttgaaaccagaaaacctacttttggatgagaatgaggatctaaaggtt
tcagatttcggattgagtgcccttggtgaatctaagcggcaagatggttt
gcttcatacaacttgtggaacccctgcatacgttgcgccagaagtaataa
acaggaaaggatatgatggtgccaaagctgacatttggtcttgtggagtg
gtattgtatgttctattggctggctatctcccatttcacgattcaaatct
gatggagatgtataagaagattggtaagggcgagttcaaattccctaact
ggttttcgccagaagtacgcaggttgctgtcacagatcatggaccccaat
ccaaatactcgggtatccattgccaaaattatgcagagttcttggttccg
caagggtttggtccaaaaactggaaattgctgaggtaccgatgaaggagc
catcccctctggatgttgatgcaatttttggaccaaatgaagacagcaat
tcttctgtcgagtcaaggcaagaattatcaaagccatctaacttgaatgc
ttttgatatcatctcctactccgaaggctttgacttgtctggattgtttg
agcagacagaccagaaaaaggaagtgcggtttacatccaacaaaacggca
tccaccatcatctctaagctggaggacattgccaagcgtctgaagctaaa
aataaagaagcgggatggaggattgttgaaaatggaagggtccacggaag
gcaggaagggggtgctgagcattgacaccgagatatttgaaatcaccccg
acttttcatctggtggaagtgaagaagtctagtggagatacattggagta
tcagaaggtcattaagaaagatatcagaccagctctgaaggacattgttt
ggacttggcaaggggcggagcagcagcagcagcagcagcaagaagaagaa
gagccaccacaactagtgcaggagctgccgcagggacaagaacacacgta
g

Coding sequence (CDS) from alignment at KT336292:1..1401+

>KT336292.1-CIPK10.m1 ID=KT336292.1-CIPK10.m1; Name=CIPK10; organism=Malus domestica; type=CDS; length=1401bp; location=Sequence derived from: KT336292:1..1401+ (Malus domestica
atggaaaacaaaggaagcgtgttgatgcagcggtatgaattggggcgaat
actaggccaaggaacctttgccaaggttcactatgcgaggaatcttaaaa
ccggcatgagtgtggcgattaagataattgataaagagagggtcttgaag
gtcggaatgattgatcagattaagcgagaaatttctgtcatgcgactgat
tagacacccgaatgttgtggagctttatgaggtaatggccagcaaaacca
agatttactttgtcatggagtatgtcaaaggtggtgagctcttcaacaag
gtttccaaaggcaagctaaaggaggatgttgctaggaaatattttcagca
gctcatcagtgctgttgattactgccatagtcgaggagtctgccaccgag
atttgaaaccagaaaacctacttttggatgagaatgaggatctaaaggtt
tcagatttcggattgagtgcccttggtgaatctaagcggcaagatggttt
gcttcatacaacttgtggaacccctgcatacgttgcgccagaagtaataa
acaggaaaggatatgatggtgccaaagctgacatttggtcttgtggagtg
gtattgtatgttctattggctggctatctcccatttcacgattcaaatct
gatggagatgtataagaagattggtaagggcgagttcaaattccctaact
ggttttcgccagaagtacgcaggttgctgtcacagatcatggaccccaat
ccaaatactcgggtatccattgccaaaattatgcagagttcttggttccg
caagggtttggtccaaaaactggaaattgctgaggtaccgatgaaggagc
catcccctctggatgttgatgcaatttttggaccaaatgaagacagcaat
tcttctgtcgagtcaaggcaagaattatcaaagccatctaacttgaatgc
ttttgatatcatctcctactccgaaggctttgacttgtctggattgtttg
agcagacagaccagaaaaaggaagtgcggtttacatccaacaaaacggca
tccaccatcatctctaagctggaggacattgccaagcgtctgaagctaaa
aataaagaagcgggatggaggattgttgaaaatggaagggtccacggaag
gcaggaagggggtgctgagcattgacaccgagatatttgaaatcaccccg
acttttcatctggtggaagtgaagaagtctagtggagatacattggagta
tcagaaggtcattaagaaagatatcagaccagctctgaaggacattgttt
ggacttggcaaggggcggagcagcagcagcagcagcagcaagaagaagaa
gagccaccacaactagtgcaggagctgccgcagggacaagaacacacgta
g