BPC1, KM244747.1-BPC1.m1 (mRNA) Malus hupehensis

Transcript Overview


Name	BPC1
Unique Name	KM244747.1-BPC1.m1
Type	mRNA
Organism	Malus hupehensis ()
Source	genbank
Product	basic pentacysteine 1 protein
Genbank Note	MhBPC1

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KM244747.1-BPC1.m1-cds1	KM244747.1-BPC1.m1-cds1	Malus hupehensis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
BPC1	KM244747.1-BPC1.p1	Malus hupehensis	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	807059078
nuccore	KM244747.1

Alignments

Feature Name	Type	Location	Analysis
KM244747	region	KM244747:1..843+	NCBI Rosaceae gene and mRNA sequences
Chr16	chromosome	Chr16:985697..986532+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at KM244747:1..843+
coding sequence from alignment at KM244747:1..843+

mRNA sequence

>KM244747.1-BPC1.m1 ID=KM244747.1-BPC1.m1; Name=BPC1; organism=Malus hupehensis; type=mRNA; length=843bp
atggatgatgatgcattgaacatgcgcaattggggttactatgagccatc
ttttaaaggtcatcttagcctgcagctcatgtcaagcatggcagagcgcg
acattaaaccttttgcccctgggcgcgatcctgcagtcatggttagcgcc
aacggagcttatcaccctcgggattgtgttgtatcagacgctcagcttcc
aatgaactatatgagggagagttgggtaaaccagcgagataaatttctca
atatgatgcctgccaatcctaactatgctgctgttcttccggaaacttca
ggagctcattccttgcagatcttacagccaccggaagcgtcaagggatga
gcgggtgggtaggatggaagagccagttgtccctaaggaaggtggcacct
caaagaaaagacagggtgggggtgcaccaaaagccccaaaagcgaaaagg
cccaggaagccaaaggataatgccaatccttcagttcctcgtgtgaagcc
agcaaagaagagtttggacgttgtgataaatgggattaatatggatatct
ctggtattccaattcccgtctgctcgtgcactggagctgcacaacagtgt
tataggtgggggtgtggtggttggcaatctgcttgttgcaccacaaatgt
atctatgtatcctctgccaatgagtaccaagcgacgcggggcaagaatag
ctggaagaaaaatgagtcagggtgctttcaagaaggtgctggagaagctt
gcagctgaaggttataattttgctaacccaattgatctaaggtctcactg
ggcaaaacatggtaccaacaagttcgtcactctcagaaactga

protein sequence of BPC1

>KM244747.1-BPC1.p1 ID=KM244747.1-BPC1.p1; Name=BPC1; organism=Malus hupehensis; type=polypeptide; length=280bp
MDDDALNMRNWGYYEPSFKGHLSLQLMSSMAERDIKPFAPGRDPAVMVSA
NGAYHPRDCVVSDAQLPMNYMRESWVNQRDKFLNMMPANPNYAAVLPETS
GAHSLQILQPPEASRDERVGRMEEPVVPKEGGTSKKRQGGGAPKAPKAKR
PRKPKDNANPSVPRVKPAKKSLDVVINGINMDISGIPIPVCSCTGAAQQC
YRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL
AAEGYNFANPIDLRSHWAKHGTNKFVTLRN

mRNA from alignment at KM244747:1..843+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KM244747.1-BPC1.m1 ID=KM244747.1-BPC1.m1; Name=BPC1; organism=Malus hupehensis; type=mRNA; length=843bp; location=Sequence derived from: KM244747:1..843+ (Malus hupehensis
atggatgatgatgcattgaacatgcgcaattggggttactatgagccatc
ttttaaaggtcatcttagcctgcagctcatgtcaagcatggcagagcgcg
acattaaaccttttgcccctgggcgcgatcctgcagtcatggttagcgcc
aacggagcttatcaccctcgggattgtgttgtatcagacgctcagcttcc
aatgaactatatgagggagagttgggtaaaccagcgagataaatttctca
atatgatgcctgccaatcctaactatgctgctgttcttccggaaacttca
ggagctcattccttgcagatcttacagccaccggaagcgtcaagggatga
gcgggtgggtaggatggaagagccagttgtccctaaggaaggtggcacct
caaagaaaagacagggtgggggtgcaccaaaagccccaaaagcgaaaagg
cccaggaagccaaaggataatgccaatccttcagttcctcgtgtgaagcc
agcaaagaagagtttggacgttgtgataaatgggattaatatggatatct
ctggtattccaattcccgtctgctcgtgcactggagctgcacaacagtgt
tataggtgggggtgtggtggttggcaatctgcttgttgcaccacaaatgt
atctatgtatcctctgccaatgagtaccaagcgacgcggggcaagaatag
ctggaagaaaaatgagtcagggtgctttcaagaaggtgctggagaagctt
gcagctgaaggttataattttgctaacccaattgatctaaggtctcactg
ggcaaaacatggtaccaacaagttcgtcactctcagaaactga

Coding sequence (CDS) from alignment at KM244747:1..843+

>KM244747.1-BPC1.m1 ID=KM244747.1-BPC1.m1; Name=BPC1; organism=Malus hupehensis; type=CDS; length=843bp; location=Sequence derived from: KM244747:1..843+ (Malus hupehensis
atggatgatgatgcattgaacatgcgcaattggggttactatgagccatc
ttttaaaggtcatcttagcctgcagctcatgtcaagcatggcagagcgcg
acattaaaccttttgcccctgggcgcgatcctgcagtcatggttagcgcc
aacggagcttatcaccctcgggattgtgttgtatcagacgctcagcttcc
aatgaactatatgagggagagttgggtaaaccagcgagataaatttctca
atatgatgcctgccaatcctaactatgctgctgttcttccggaaacttca
ggagctcattccttgcagatcttacagccaccggaagcgtcaagggatga
gcgggtgggtaggatggaagagccagttgtccctaaggaaggtggcacct
caaagaaaagacagggtgggggtgcaccaaaagccccaaaagcgaaaagg
cccaggaagccaaaggataatgccaatccttcagttcctcgtgtgaagcc
agcaaagaagagtttggacgttgtgataaatgggattaatatggatatct
ctggtattccaattcccgtctgctcgtgcactggagctgcacaacagtgt
tataggtgggggtgtggtggttggcaatctgcttgttgcaccacaaatgt
atctatgtatcctctgccaatgagtaccaagcgacgcggggcaagaatag
ctggaagaaaaatgagtcagggtgctttcaagaaggtgctggagaagctt
gcagctgaaggttataattttgctaacccaattgatctaaggtctcactg
ggcaaaacatggtaccaacaagttcgtcactctcagaaactga