Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.8	CTG1065662	CTG1065662	marker_locus	46.97 cM
Apple-C16xC17-F1-2012.8	CN930910	CN930910	marker_locus	49.79 cM
Apple-C16xC17-F1-2012.8	CTG1075246	CTG1075246	marker_locus	50.22 cM
Apple-C16xC17-F1-2012.8	MdSNPui04391	MdSNPui04391	marker_locus	51.22 cM
Apple-C16xC17-F1-2012.8	MdSNPui03142	MdSNPui03142	marker_locus	59.76 cM
Apple-C16xC17-F1-2012.8	GDsnp01405	GDsnp01405	marker_locus	60.53 cM
Apple-C16xC17-F1-2012.8	MdSNPui07502	MdSNPui07502	marker_locus	61.38 cM
Apple-C16xC17-F1-2012.8	MdSNPui10275	MdSNPui10275	marker_locus	61.72 cM
Apple-C16xC17-F1-2012.8	MdSNPui09116	MdSNPui09116	marker_locus	61.99 cM
Apple-C16xC17-F1-2012.8	MdSNPui09115	MdSNPui09115	marker_locus	62.8 cM
Apple-C16xC17-F1-2012.8	MdSNPui10537	MdSNPui10537	marker_locus	63.8 cM
Apple-C16xC17-F1-2012.8	MdSNPui06772	MdSNPui06772	marker_locus	65.1 cM
Apple-C16xC17-F1-2012.8	MdSNPui10538	MdSNPui10538	marker_locus	66.28 cM
Apple-C16xC17-F1-2012.8	CTG1066349	CTG1066349	marker_locus	68.19 cM
Apple-C16xC17-F1-2012.8	CN907419	CN907419	marker_locus	68.88 cM
Apple-C16xC17-F1-2012.8	CN893610	CN893610	marker_locus	69.04 cM
Apple-C16xC17-F1-2012.8	CN884916-1	CN884916-1	marker_locus	70.97 cM
Apple-C16xC17-F1-2012.8	CTG1066618	CTG1066618	marker_locus	71.41 cM
Apple-C16xC17-F1-2012.8	KB01-2D4	KB01-2D4	marker_locus	71.96 cM
Apple-C16xC17-F1-2012.8	BACSSR38	BACSSR38	marker_locus	73.26 cM
Apple-C16xC17-F1-2012.8	BACSSR31-2	BACSSR31-2	marker_locus	74.31 cM
Apple-C16xC17-F1-2012.8	MdSNPui05612	MdSNPui05612	marker_locus	79.21 cM
Apple-C16xC17-F1-2012.8	CN994595	CN994595	marker_locus	79.48 cM
Apple-C16xC17-F1-2012.8	MdSNPui04920	MdSNPui04920	marker_locus	80.1 cM
Apple-C16xC17-F1-2012.8	GDsnp00344	GDsnp00344	marker_locus	80.43 cM

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