isPIE1, isPIE1 (genetic_marker) Prunus avium | GDR

Marker Overview

Marker Overview


Name	PIE1
Genbank ID	N/A
Type	candidate gene marker
Species	Prunus avium
Primer 1	isPIE1.Forward: GGGGGTGTTGGAATAAACCT
Primer 2	isPIE1.Reverse: AACAGCTTCCTCCTGCTCAA
Publication	[view all]
Comment	peach homologue was located on the peach genome sequence and then located into the sweet cherry map using flanking markers

Publications


Year	Publication
2015	Castède S, Campoy JA, Le Dantec L, Quero-García J, Barreneche T, Wenden B, Dirlewanger E. Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium). PloS one. 2015; 10(11):e0143250.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Sweet Cherry-RG-F1-2015	R4	N/A	17.9	PIE1	View
2	Sweet Cherry-RL-F1-2015	R4	N/A	21.41	PIE1	View

Alignments

Feature Name	Type	Location	Analysis
Pp04	chromosome	Pp04:7497149..7497580.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV04_REGINA	chromosome	PAV04_REGINA:9588976..9589407.	Prunus avium Regina Genome v1.0 Assembly & Annotation
chr_4	chromosome	chr_4:10898935..10899366.	Prunus avium Tieton Genome v2.0 Assembly & Annotation
Pd04	chromosome	Pd04:7662454..7662885.	Prunus dulcis Lauranne Genome v1.0