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Marker Overview
Name | s7_19548350 |
dbSNP ID | N/A |
SNP Array ID | Cherry 6+9K SNP array: | s7_19548350 |
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Type | SNP |
SNP Alleles | A/G |
5' Flanking Sequence | TTTAACTCTCAATTAAATCCCAATTTCTTTGCTTTTCCTCACCCTCAATTGCTTCTGTTT
GGTTCATTTTCAGTGAGAACAAGCAATCATGGAAAATAGGGATCAGGGTGCAGCTCAAAA
CCATCCTTGTGCTTCCTGCAAGCAGCAGAG |
3' Flanking Sequence | AGAAAATGTGATGAGACCTGTGAAATGGCCCCATACTTTCCAGCCAGCAGGTACAGTGAG
TTCCAAAATGCTCATAAGATCTTTGGTGTGAGCAACATCCAAAAGATCATGGCCATGGCT
GCACCTGATCAAAAACAGGCAGCTGCTGAA |
Species | Prunus avium |
Publication | [view all] |
Contact | Patricio Hinrichsen Stijn Vanderzande
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Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs |
Alignments
The following features are aligned
Publications
Year | Publication |
2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s7_19548350 ID=s7_19548350; Name=s7_19548350; organism=Prunus avium; type=genetic_marker; length=301bp TTTAACTCTCAATTAAATCCCAATTTCTTTGCTTTTCCTCACCCTCAATT GCTTCTGTTTGGTTCATTTTCAGTGAGAACAAGCAATCATGGAAAATAGG GATCAGGGTGCAGCTCAAAACCATCCTTGTGCTTCCTGCAAGCAGCAGAG RAGAAAATGTGATGAGACCTGTGAAATGGCCCCATACTTTCCAGCCAGCA GGTACAGTGAGTTCCAAAATGCTCATAAGATCTTTGGTGTGAGCAACATC CAAAAGATCATGGCCATGGCTGCACCTGATCAAAAACAGGCAGCTGCTGA A
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