AX-89788519, AX-89788519 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89788519
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88846917
TypeSNP
SNP AllelesA/G
Probe 1AX-89788519.AX-89788519: CTTACAGTTATTTACCCGCTGCCTGTCTTA
5' Flanking SequenceGAGAAGAATGTCAATAAATGGGCGACGGACAGAAT
3' Flanking SequenceAAGGTACATAAACATCCCCTACGCATTTTGAGACA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb7chromosomeFvb7:1872911..1872953 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb4chromosomeFvb4:144971..145041 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:18859223..18859265 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7-4chromosomeFvb7-4:19159284..19159326 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-1chromosomeFvb4-1:73321..73391 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb3-1chromosomeFvb3-1:14311108..14311150 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-3chromosomeFvb1-3:23657322..23657364 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-2chromosomeFvb1-2:17238573..17238615 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-4chromosomeFvb4-4:21147905..21147947 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-3chromosomeFvb4-3:31890154..31890224 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-2chromosomeFvb4-2:25750335..25750405 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb2-3chromosomeFvb2-3:20432194..20432236 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG4chromosomeLG4:1374244..1374244 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89788519 ID=AX-89788519; Name=AX-89788519; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GAGAAGAATGTCAATAAATGGGCGACGGACAGAATRAAGGTACATAAACA
TCCCCTACGCATTTTGAGACA