Bababerry

Germplasm Overview


Name	Bababerry
Alias	N/A
Institutional Name	Bababerry
Sample Name	EY0052924_CLT2_CLT2_snapper_rubus.cel
GRIN ID	PI 553543
Type	Cultivar
Species	Rubus idaeus
Description	Bababerry
Origin Country	N/A
Origin Detail	N/A
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 36]
SSR Genotype Data	N/A
SNP Genotype Data	[view all 12224]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications.. G3 (Bethesda, Md.). 2023 Aug 11.

Publications


Year	Publication
2023	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications. G3 (Bethesda, Md.). 2023 Aug 11. DOI: 10.1093/g3journal/jkad170

Snp Genotype Data

Total 12,224 records

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#	Dataset	Marker Name	Allele	Genotype
1	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-115251414	Y	T\|T
2	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-159144814	Y	C\|C
3	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-159212454	R	A\|G
4	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-166513670	Y	T\|T
5	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-184403348	R	A\|A
6	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-184752440	M	C\|C
7	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-208713277	Y	T\|C
8	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-226069626	R	G\|G
9	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096548	R	A\|A
10	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096550	R	A\|A
11	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096555	R	G\|G
12	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096558	Y	T\|T
13	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096559	M	C\|C
14	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096560	R	G\|G
15	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096584	Y	T\|C
16	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096589	R	A\|A
17	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096590	K	G\|G
18	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096592	Y	T\|T
19	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096597	Y	C\|C
20	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096602	R	A\|G
21	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096606	R	A\|A
22	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096610	R	G\|G
23	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096611	R	A\|G
24	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096612	R	A\|A
25	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096618	R	G\|G

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Cross References

External references for this accession


Database	Accession
GRIN	PI 553543

Phenotypic Data

Total 36 trait scores

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#	Dataset	Descriptor	Value
1	1995_Thompson_Count	CHROMOCOUNT	14
2	1995_Thompson_Count	CHROMOCOUNT	14
3	1995_Thompson_Count	PLOIDYEQUA	2n = 2x = 14
4	1995_Thompson_Count	PLOIDYEQUA	2n = 2x = 14
5	PROPAGATION-RUBUS	PROPAGATION	root
6	PROPAGATION-RUBUS	PROPAGATION	root
7	RUBUS.CALIFORNIA.90	BOTRYTIS	1
8	RUBUS.CALIFORNIA.90	BOTRYTIS	1
9	RUBUS.CALIFORNIA.90	LEAFRUST	3.5
10	RUBUS.CALIFORNIA.90	LEAFRUST	3.5
11	RUBUS.CORE.1998	CORE	0
12	RUBUS.CORE.1998	CORE	0
13	RUBUS.PERKINS.ANTIOXIDANT.2002	ACIDITY	1.14
14	RUBUS.PERKINS.ANTIOXIDANT.2002	ACIDITY	1.14
15	RUBUS.PERKINS.ANTIOXIDANT.2002	ACIDITY	1.25
16	RUBUS.PERKINS.ANTIOXIDANT.2002	ACIDITY	1.25
17	RUBUS.PERKINS.ANTIOXIDANT.2002	ANTHOCYAN	57.43
18	RUBUS.PERKINS.ANTIOXIDANT.2002	ANTHOCYAN	57.43
19	RUBUS.PERKINS.ANTIOXIDANT.2002	FRAP	32.31
20	RUBUS.PERKINS.ANTIOXIDANT.2002	FRAP	32.31
21	RUBUS.PERKINS.ANTIOXIDANT.2002	FRAP	38.87
22	RUBUS.PERKINS.ANTIOXIDANT.2002	FRAP	38.87
23	RUBUS.PERKINS.ANTIOXIDANT.2002	FRUITSIZE	2.7
24	RUBUS.PERKINS.ANTIOXIDANT.2002	FRUITSIZE	2.7
25	RUBUS.PERKINS.ANTIOXIDANT.2002	PH	3

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