Ppe-HB-04-7

Haplotype Block Overview

Publications


Year	Publication
2019	Vanderzande S, Howard NP, Cai L, Da Silva Linge C, Antanaviciute L, Bink MCAM, Kruisselbrink JW, Bassil N, Gasic K, Iezzoni A, Van de Weg E, Peace C. High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow. PloS one. 2019; 14(6):e0210928.

Stock Haplotype

Map Positions


Haplotype Block	Map Name	Linkage Group	Start	Stop
Ppe-HB-04-7	Peach-RosBREED-4K-2019	4	21.8	24.81

Projects


Project Name
RosBREED_Peach_CRS_Haplotype_2020

Haplotypes

Marker	HB-04-7_10	HB-04-7_11	HB-04-7_12	HB-04-7_13	HB-04-7_14	HB-04-7_15	HB-04-7_18	HB-04-7_2	HB-04-7_23	HB-04-7_24	HB-04-7_25	HB-04-7_26	HB-04-7_3	HB-04-7_4	HB-04-7_5	HB-04-7_6	HB-04-7_7	HB-04-7_9
SNP_IGA_391543	B	B	B	B	B	B	B	A	A	B	B	-	B	B	B	B	B	B
SNP_IGA_391620	B	B	B	B	B	B	B	A	A	B	B	-	B	B	B	B	B	B
SNP_IGA_391629	B	B	B	B	B	B	B	A	A	B	B	-	B	B	B	B	B	B
SNP_IGA_391799	A	A	A	A	B	A	A	B	A	B	A	-	A	A	A	A	A	B
SNP_IGA_391818	A	A	A	A	B	A	A	B	B	A	A	-	A	A	A	A	A	B
SNP_IGA_392147	B	B	B	B	B	B	B	A	B	A	B	-	B	B	B	B	B	B
SNP_IGA_392186	B	A	B	B	A	A	B	B	B	B	A	-	A	A	B	A	A	A
SNP_IGA_392228	A	B	A	A	B	B	A	A	A	A	B	-	B	B	A	B	B	B
SNP_IGA_392232	A	B	A	A	B	B	A	A	A	A	B	-	B	B	A	B	B	B
SNP_IGA_392239	A	B	A	A	B	B	A	A	A	A	B	-	B	B	A	B	B	B
SNP_IGA_392245	B	A	B	B	A	A	B	B	B	B	A	-	A	A	B	A	A	A
SNP_IGA_392288	A	B	A	A	A	B	A	A	A	A	A	-	B	B	A	B	B	A
SNP_IGA_392387	A	B	A	B	B	B	A	B	A	B	B	B	B	B	A	B	B	B
SNP_IGA_392481	A	A	A	B	B	A	A	B	A	B	B	-	B	A	A	B	B	B
SNP_IGA_392549	B	B	B	A	A	B	B	A	B	A	B	-	A	B	B	B	A	A
SNP_IGA_392560	B	B	B	A	A	B	B	A	A	B	B	-	A	B	B	B	A	A
SNP_IGA_392950	B	A	B	B	A	A	B	B	B	B	A	-	B	A	B	B	B	B
SNP_IGA_392956	A	B	A	B	B	B	B	B	A	B	B	B	B	B	A	A	B	-
SNP_IGA_393060	B	A	B	A	A	A	B	A	B	A	A	A	A	A	B	B	A	B
SNP_IGA_393735	A	A	A	A	B	B	A	A	A	A	A	-	A	A	A	B	A	A
SNP_IGA_393740	B	A	B	A	B	B	B	A	B	B	A	-	A	B	B	B	A	A
SNP_IGA_393752	A	B	A	B	A	A	A	B	A	A	B	-	B	A	A	A	B	B
SNP_IGA_393759	B	B	B	B	A	A	B	B	B	B	B	-	B	B	B	A	B	B
SNP_IGA_393777	B	A	B	A	A	A	B	A	B	B	A	A	A	B	B	A	A	A
SNP_IGA_394015	A	B	B	B	A	B	A	B	A	A	A	B	B	A	A	B	B	B
SNP_IGA_394026	B	A	A	A	B	A	B	A	B	B	B	A	A	B	B	A	A	A
SNP_IGA_394034	A	B	B	B	A	B	A	B	A	A	A	B	B	A	A	B	B	B
SNP_IGA_394410	B	A	A	A	B	A	B	A	B	B	A	A	B	B	B	A	A	A
SNP_IGA_394550	B	A	A	A	B	A	B	A	B	B	A	A	B	B	B	A	A	A
SNP_IGA_394575	B	A	A	A	B	A	B	A	B	B	A	A	B	B	B	A	A	A
SNP_IGA_394608	B	A	A	A	B	A	B	A	B	B	A	A	B	B	B	A	A	A
SNP_IGA_394615	B	A	A	A	B	A	B	A	B	B	B	A	B	B	B	A	A	A
SNP_IGA_394698	A	B	B	B	A	B	A	B	A	A	A	B	A	A	A	B	B	B
SNP_IGA_394713	A	B	B	B	A	B	A	B	A	A	A	B	A	A	A	B	B	B
SNP_IGA_394780	A	B	B	B	B	B	A	B	A	A	B	B	A	A	A	B	B	B
SNP_IGA_394859	A	B	B	B	B	B	A	B	A	A	A	B	B	A	A	B	B	B
SNP_IGA_395202	B	B	A	B	B	B	A	B	A	B	B	B	B	B	A	A	B	B
SNP_IGA_395253	B	A	A	A	A	A	A	B	A	B	B	-	A	A	A	B	A	A

Alignments

Feature Name	Type	Location	Analysis
Pp04	chromosome	Pp04:5449813..6202308.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)