MN1627 | GDR

Germplasm Overview


Name	MN1627
Alias	N/A
GRIN ID	N/A
Type	Breeding Research Material
Species	Malus x domestica
Description	N/A
Origin Country	N/A
Origin Detail	N/A
Pedigree	N/A
Maternal Parent	Frostbite
Paternal Parent	Golden Delicious
Maternal Parent of	MN1837 [view all 3]
Paternal Parent of	Honeycrisp
Phenotypic Data	[view all 111]
SSR Genotype Data	N/A
SNP Genotype Data	[view all 10295]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Howard NP, Peace C, Silverstein KATS, Poets A, Luby JJ, Vanderzande S, Durel CE, Muranty H, Denancé C, and van de Weg E. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Accepted to Horticulture Research.

Alias


Synonym
MN 1627

Publications


Year	Publication
2021	Howard, N.P., Peace, C., Silverstein, K.A.T. et al. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Hortic Res 8, 202 (2021). https://doi.org/10.1038/s41438-021-00637-5

Snp Genotype Data

Total 10,295 records

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#	Dataset	Marker Name	Allele	Genotype
1	Apple_SNP_genotype_Howard_2021	SNP_FB_0673809	A/C	- \| -
2	Apple_SNP_genotype_Howard_2021	SNP_FB_1004090	A/C	B \| B
3	Apple_SNP_genotype_Howard_2021	SNP_FB_1004093	T/C	- \| -
4	Apple_SNP_genotype_Howard_2021	SNP_FB_0411310	A/G	- \| -
5	Apple_SNP_genotype_Howard_2021	SNP_FB_0411306	A/G	- \| -
6	Apple_SNP_genotype_Howard_2021	SNP_FB_0938917	T/C	A \| A
7	Apple_SNP_genotype_Howard_2021	SNP_FB_1114742	T/G	B \| B
8	Apple_SNP_genotype_Howard_2021	SNP_FB_1114723	T/C	- \| -
9	Apple_SNP_genotype_Howard_2021	SNP_FB_1114722	T/C	- \| -
10	Apple_SNP_genotype_Howard_2021	SNP_FB_1114720	T/G	- \| -
11	Apple_SNP_genotype_Howard_2021	SNP_FB_0976787	T/C	B \| B
12	Apple_SNP_genotype_Howard_2021	SNP_FB_1021088	T/G	- \| -
13	Apple_SNP_genotype_Howard_2021	SNP_FB_1021087	A/C	- \| -
14	Apple_SNP_genotype_Howard_2021	SNP_FB_1021083	T/C	- \| -
15	Apple_SNP_genotype_Howard_2021	SNP_FB_1099992	T/G	- \| -
16	Apple_SNP_genotype_Howard_2021	SNP_FB_0411478	T/C	- \| -
17	Apple_SNP_genotype_Howard_2021	SNP_FB_0411487	A/G	- \| -
18	Apple_SNP_genotype_Howard_2021	SNP_FB_0411488	T/C	- \| -
19	Apple_SNP_genotype_Howard_2021	RosBREEDSNP_SNP_AG_4746500_Lg1_MDP0000213515_MAF40_MDP0000213515_exon1	A/G	A \| B
20	Apple_SNP_genotype_Howard_2021	SNP_FB_0411491	T/C	- \| -
21	Apple_SNP_genotype_Howard_2021	SNP_FB_0411493	A/C	B \| B
22	Apple_SNP_genotype_Howard_2021	SNP_FB_0939068	A/G	B \| B
23	Apple_SNP_genotype_Howard_2021	SNP_FB_0939067	T/C	- \| -
24	Apple_SNP_genotype_Howard_2021	SNP_FB_0411700	T/C	A \| A
25	Apple_SNP_genotype_Howard_2021	SNP_FB_0411698	A/G	- \| -

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Maternal Parent Of

Phenotypic Data

Total 111 trait scores

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#	Dataset	Descriptor	Value
1	Apple_CRS_phenotyping_2011	Cn_0	102.4198
2	Apple_CRS_phenotyping_2011	Cn_10	83.1604
3	Apple_CRS_phenotyping_2011	Cn_20	52.513
4	Apple_CRS_phenotyping_2011	QF_0	85.4274
5	Apple_CRS_phenotyping_2011	QF_10	34.7056
6	Apple_CRS_phenotyping_2011	QF_20	1.7014
7	Apple_CRS_phenotyping_2011	Grease_0	1
8	Apple_CRS_phenotyping_2011	Grease_10	1
9	Apple_CRS_phenotyping_2011	Grease_20	1
10	Apple_CRS_phenotyping_2011	Shrivel_0	1
11	Apple_CRS_phenotyping_2011	Shrivel_10	1
12	Apple_CRS_phenotyping_2011	Shrivel_20	3
13	Apple_CRS_phenotyping_2011	Scald_0	1
14	Apple_CRS_phenotyping_2011	Scald_10	1
15	Apple_CRS_phenotyping_2011	Scald_20	2
16	Apple_CRS_phenotyping_2011	BitterPit_0	1
17	Apple_CRS_phenotyping_2011	BitterPit_10	1
18	Apple_CRS_phenotyping_2011	BitterPit_20	1
19	Apple_CRS_phenotyping_2011	IntBrown_0	1
20	Apple_CRS_phenotyping_2011	IntBrown_10	1
21	Apple_CRS_phenotyping_2011	IntBrown_20	1
22	Apple_CRS_phenotyping_2011	WaterCore_0	1
23	Apple_CRS_phenotyping_2011	WaterCore_10	1
24	Apple_CRS_phenotyping_2011	WaterCore_20	1
25	Apple_CRS_phenotyping_2011	MoldyCore_0	0

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Paternal Parent Of

Germplasm Name	Description	Type
Honeycrisp		accession