PARG00189m01, PARG00189m01_v1.0 (mRNA) Prunus armeniaca
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: Q153Y3_PRUAV (Polyprotein (Fragment) OS=Prunus avium OX=42229 PE=4 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 1.833e-103 Identity = 157/209 (75.12%), Postives = 163/209 (77.99%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVR 174
MNENSKPVSTPLA FKLSASMSP EESHYMAQIPYASA+ SL YAMVCTR DISQAVSI DKV+GQCVVGYVDSDYAGDLDKRRSTTGFVFTI GGPVSWRSILQSTVALSTTEA+YMAVTEAIKEAIWLQGLLDDLG+Q DHVDV+ DSQ+AIYLAKNQVHHARTKHIDVR
Sbjct: 68 MNENSKPVSTPLAPHFKLSASMSPNTDEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDLGVQQDHVDVYCDSQSAIYLAKNQVHHARTKHIDVR 276
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: A0A2P5SG66_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04975 PE=4 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 7.289e-94 Identity = 151/243 (62.14%), Postives = 177/243 (72.84%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQ 208
MNE +K VSTPLA+ FKLSA +SP E YM Q+PY++A+ SL YAMVCTR DISQAVSI D G+CVVGYVDSDYAGDLDKRRSTTG+VFT+ GGP+SW+S LQSTVALSTTEA+YMAVTEA+KEAIWLQG++ LG+ +H +V+ DSQ+AI+LAKNQV+HARTKHIDVRFHFVREIIDEG I LQKI ADNLADM+TK + +
Sbjct: 764 MNEQTKAVSTPLASHFKLSAQLSPSTNTEQEYMLQVPYSNAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYIHKTMDIGLLFKQDTTLGKCVVGYVDSDYAGDLDKRRSTTGYVFTLAGGPISWKSTLQSTVALSTTEAEYMAVTEAVKEAIWLQGMVKTLGLVQEHFNVYCDSQSAIHLAKNQVYHARTKHIDVRFHFVREIIDEGKIHLQKIKTADNLADMMTKVLKK 1006
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: A0A2R6RIX9_ACTCH (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05285 PE=4 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 4.004e-93 Identity = 147/245 (60.00%), Postives = 178/245 (72.65%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI------------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQV 209
++ ++KPVSTPLA+ F+LSASMSP+ +E +MA +PYA+A+ +L YAMVCTR DIS AVS+ DKV G VGYVDSDYAGDLDKRRSTTG+VFT+ GGPV WRS LQSTVALSTTEA+YMAVTEA KEAIWL GL++DLGI +HVDV+ DSQ+AI LAKNQVHH RTKHIDV+FHF+REI++EGD+LL+KI DN ADMLT V+++
Sbjct: 344 IDSSTKPVSTPLASHFRLSASMSPRTDDERKHMANVPYANAVGALMYAMVCTRPDISHAVSMVSRYMHDPGKEHWMAVKWILRYIQGTIDVGLKYQREDKV-GHLSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGIDQEHVDVYCDSQSAICLAKNQVHHFRTKHIDVQFHFIREILNEGDVLLEKISTKDNPADMLTNVVSEI 587
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: A0A2R6QHR4_ACTCH (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 PE=4 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 7.763e-89 Identity = 147/244 (60.25%), Postives = 176/244 (72.13%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQV 209
++ ++KPVSTPLA+ F+LSASMSP +E +M IPYA+A+ +L YAMVCTR DIS AVS+ D + Q VGYVDSDYAGDLDKRRSTTG+VFT+ GGPV WRS LQSTVALSTTEA+YMAVTEA KEAIWL GL++DLGI +HVDV+ DSQ+AI LAKNQVHH+RTKHIDVRFHF+REI++EGD+LL+KI DN ADMLTK V+ +
Sbjct: 1022 IDSSTKPVSTPLASHFRLSASMSPHTEDERKHMENIPYANAVGALMYAMVCTRPDISHAVSMVSRYMHNPGKVHWQAVKWILRYIHGTVNVGLKFQRDDKSSQYSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGIDQEHVDVYCDSQSAICLAKNQVHHSRTKHIDVRFHFIREILNEGDVLLEKISTKDNPADMLTKVVSGI 1265
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: Q94FM1_CITPA (Pol polyprotein OS=Citrus paradisi OX=37656 GN=pol PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 9.022e-88 Identity = 136/242 (56.20%), Postives = 171/242 (70.66%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI---------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQV 209
M++ +K V TPLA FKLS+S P+ EE YMA +PYAS + SL YAMVCTR DISQAVS+ K GQ VGY DSD+AGDLDK+RST+G+VFT+ GG VSWRSILQST+ALSTTEA+Y+A TEA+KEAIWL+GLL DLG+ +++ V D+Q+AI+LAKNQ +HARTKHIDV++H+VREII+ GD+LL+KI DN +DMLTK V++V
Sbjct: 41 MDDKTKLVCTPLALHFKLSSSSCPRSQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEV 282
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: A0A2R6RYD4_ACTCH (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02232 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 1.452e-85 Identity = 142/237 (59.92%), Postives = 171/237 (72.15%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADML 202
++ ++KPVSTPLA+ F+LSASMSP +E +M IPYA+A+ +L YAMVCTR DIS AVS+ D + Q VGYVDSDYAGDLDKRRSTTG+VFT+ GGPV WRS LQSTVALSTTEA+YMAVTEA KEAIWL GL++DLGI +HVDV+ DSQ+AI LAKNQVHH+RTKHIDVRFHF+REI++EGD+LL+KI DN AD++
Sbjct: 1072 IDSSTKPVSTPLASHFRLSASMSPHTEDERKHMENIPYANAVGALMYAMVCTRPDISHAVSMVSRYMHNPGKVHWQAVKWILRYIHGTVNVGLKFQRDDKSSQYSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGIDQEHVDVYCDSQSAICLAKNQVHHSRTKHIDVRFHFIREILNEGDVLLEKISTKDNPADIM 1308
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: A0A2N9IQA1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54580 PE=4 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.477e-83 Identity = 128/205 (62.44%), Postives = 162/205 (79.02%), Query Frame = 0
Query: 4 NSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVS-IDKVTG-QCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFV 206
++KPVSTPLA F+LS S PK EE M+++PYASA+ L YAMVCTR D++ AVS + + G VVGYVD+DYAG++D RRSTTG+VFT+ GGP+ W+SILQS VA+STTEA+YMAV EA KEA+WL+GL+ +LG+ V +H DSQ AIYLAKNQV+HARTKHIDVRFH +RE+I GDI+L+K+ ++N ADMLTK V
Sbjct: 318 DAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSILQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLNQGGVQMHCDSQRAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPV 522
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: A0A2N9JA54_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61650 PE=4 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 3.361e-81 Identity = 140/241 (58.09%), Postives = 168/241 (69.71%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFV 206
M+ +KPVSTPLA+ FKLS+ +SP+ EE YMA IPYAS + SL YAMVCTR +ISQAVS+ D + +VGYVDSDYA DLDK RSTT VFT PVSWRS LQ+T+ALSTTEA+YMA+TEAIKEAIWL GL++DLGI +H+ V DSQ+AI+LAKNQVHH+RTKHI+VRFHF+ +I+D+GDILLQKIG ADN DM+TK V
Sbjct: 811 MDSKTKPVSTPLASHFKLSSLLSPRTDEEREYMAHIPYASLVGSLMYAMVCTRPNISQAVSMVSRYMHDTAKSHWQATKWILRYILGTVDLGLKFERDDSIERHLVGYVDSDYASDLDKHRSTTSHVFTFAKAPVSWRSTLQTTIALSTTEAEYMAMTEAIKEAIWLHGLIEDLGILQEHISVFCDSQSAIHLAKNQVHHSRTKHINVRFHFICDIVDKGDILLQKIGTADNPIDMMTKPV 1051
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: Q153Y5_SOLME (Polyprotein (Fragment) OS=Solanum melongena OX=4111 PE=4 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 4.577e-80 Identity = 125/209 (59.81%), Postives = 149/209 (71.29%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVR 174
+N++SKPVSTPLA KLS+ +SPK EE YMA++PYA+A+ SL YAMVCTR DISQAVS+ DK G CVVGY DSDYAGDLDKRRSTTG++FT+ GPVSW+S LQ+TVALSTTEA+YMA+TEA+KEAIWL GLL++LG+ H+ VH DSQ+AI+LAKNQV HARTKHIDVR
Sbjct: 153 INDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVPYANAVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLHGLLEELGVGQKHLMVHSDSQSAIHLAKNQVFHARTKHIDVR 361
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Match: A0A2N9H7C1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35422 PE=4 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 6.177e-80 Identity = 126/210 (60.00%), Postives = 159/210 (75.71%), Query Frame = 0
Query: 4 NSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAV-------SIDKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFV 206
++KPVSTPLA F+LS S PK EE M+++PYASA+ L YAMVCTR D++ A DK VVGYVD+DYAG++D RRSTTG+VFT+ GGP+ W+S LQS VA+STTEA+YMAV EA KEA+WL+GL+ +LG+ V +H DSQ+AIYLAKNQV+HARTKHIDVRFH +RE+I GDI+L+K+ ++N ADMLTK V
Sbjct: 391 DAKPVSTPLANHFRLSGSQYPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAALRNMGSYFQDKPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLNQGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPV 600
BLAST of PARG00189m01 vs. Araport11
Match: AT4G23160.3 (| cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606) HSP 1 Score: 70.4774 bits (171), Expect = 5.518e-14 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 0
Query: 73 YVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHY-DSQNAIYLAKNQVHHARTKHIDVRFHFVRE 180
+ D+ + D RRST G+ + +SW+S Q V+ S+ EA+Y A++ A E +WL +L + + + D+ AI++A N V H RTKHI+ H VRE
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
BLAST of PARG00189m01 vs. Araport11
Match: AT4G23160.2 (| cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606) HSP 1 Score: 70.4774 bits (171), Expect = 5.518e-14 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 0
Query: 73 YVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHY-DSQNAIYLAKNQVHHARTKHIDVRFHFVRE 180
+ D+ + D RRST G+ + +SW+S Q V+ S+ EA+Y A++ A E +WL +L + + + D+ AI++A N V H RTKHI+ H VRE
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
BLAST of PARG00189m01 vs. Araport11
Match: ATMG00810.1 (| DNA/RNA polymerases superfamily protein | ChrM:227709-228431 REVERSE LENGTH=240 | 201606) HSP 1 Score: 57.3806 bits (137), Expect = 7.866e-10 Identity = 49/161 (30.43%), Postives = 70/161 (43.48%), Query Frame = 0
Query: 4 NSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI---------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIW 131
+ KP+STPL P KL++S+S + Y + S + +L Y + TR DIS AV+I K + V + DSD+AG RRSTTGF + +SW + Q TV+ S+TE +Y A+ E W
Sbjct: 73 DCKPMSTPL--PLKLNSSVS-----TAKYPDPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of PARG00189m01 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.342e-64 Identity = 112/238 (47.06%), Postives = 149/238 (62.61%), Query Frame = 0
Query: 3 ENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------DKVTGQCVV---------GYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQ 208
+N+KPVSTPLA KLS M P EE MA++PY+SA+ SL YAMVCTR DI+ AV + TG C+ GY D+D AGD+D R+S+TG++FT GG +SW+S LQ VALSTTEA+Y+A TE KE IWL+ L +LG+ V+ DSQ+AI L+KN ++HARTKHIDVR+H++RE++D+ + + KI +N ADMLTK V +
Sbjct: 1076 KNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPR 1313
BLAST of PARG00189m01 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 2.904e-32 Identity = 81/239 (33.89%), Postives = 123/239 (51.46%), Query Frame = 0
Query: 3 ENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----DKVTGQC------------------------------VVGYVDSDYAGDLDKRRSTTGFVFTIVG-GPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDH-VDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTK 204
EN VSTPL P K++ + S P S I L Y M+CTR D++ AV+I K + ++GYVDSD+AG R+STTG++F + + W + Q++VA S+TEA+YMA+ EA++EA+WL+ LL + I+ ++ + ++ D+Q I +A N H R KHID+++HF RE + I L+ I + LAD+ TK
Sbjct: 1153 ENCNAVSTPL--PSKINYELL-----NSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTK 1384
BLAST of PARG00189m01 vs. ExPASy Swiss-Prot
Match: POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.856e-27 Identity = 76/239 (31.80%), Postives = 112/239 (46.86%), Query Frame = 0
Query: 5 SKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVS---------------------------------IDKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHY-DSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQV 209
+KPV+TP+A KL+ K+ + + Y + SL Y + TR D+S AV+ + K + Y D+D+AGD D ST G++ + P+SW S Q V S+TEA+Y +V E W+ LL +LGIQ H V Y D+ A YL N V H+R KHI + +HF+R + G + + + D LAD LTK +++V
Sbjct: 1201 AKPVATPMATSPKLTLHSGTKLPDPTEYRG------IVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRV 1432
BLAST of PARG00189m01 vs. ExPASy Swiss-Prot
Match: POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.768e-25 Identity = 75/239 (31.38%), Postives = 110/239 (46.03%), Query Frame = 0
Query: 5 SKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVS---------------------------------IDKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHY-DSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQV 209
+KPV+TP+A KLS K+ + + Y + SL Y + TR DIS AV+ + K + Y D+D+AGD D ST G++ + P+SW S Q V S+TEA+Y +V E W+ LL +LGI+ V Y D+ A YL N V H+R KHI + +HF+R + G + + + D LAD LTK +++
Sbjct: 1218 AKPVTTPMAPSPKLSLYSGTKLTDPTEYRG------IVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRT 1449
BLAST of PARG00189m01 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 7.572e-9 Identity = 49/161 (30.43%), Postives = 70/161 (43.48%), Query Frame = 0
Query: 4 NSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI---------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIW 131
+ KP+STPL P KL++S+S + Y + S + +L Y + TR DIS AV+I K + V + DSD+AG RRSTTGF + +SW + Q TV+ S+TE +Y A+ E W
Sbjct: 73 DCKPMSTPL--PLKLNSSVS-----TAKYPDPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|108863081|gb|ABG22123.1| (polyprotein, partial [Prunus avium]) HSP 1 Score: 308.531 bits (789), Expect = 2.181e-103 Identity = 157/209 (75.12%), Postives = 163/209 (77.99%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVR 174
MNENSKPVSTPLA FKLSASMSP EESHYMAQIPYASA+ SL YAMVCTR DISQAVSI DKV+GQCVVGYVDSDYAGDLDKRRSTTGFVFTI GGPVSWRSILQSTVALSTTEA+YMAVTEAIKEAIWLQGLLDDLG+Q DHVDV+ DSQ+AIYLAKNQVHHARTKHIDVR
Sbjct: 68 MNENSKPVSTPLAPHFKLSASMSPNTDEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDLGVQQDHVDVYCDSQSAIYLAKNQVHHARTKHIDVR 276
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|1344125493|gb|PPD98036.1| (hypothetical protein GOBAR_DD04975 [Gossypium barbadense]) HSP 1 Score: 304.679 bits (779), Expect = 8.677e-94 Identity = 151/243 (62.14%), Postives = 177/243 (72.84%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQ 208
MNE +K VSTPLA+ FKLSA +SP E YM Q+PY++A+ SL YAMVCTR DISQAVSI D G+CVVGYVDSDYAGDLDKRRSTTG+VFT+ GGP+SW+S LQSTVALSTTEA+YMAVTEA+KEAIWLQG++ LG+ +H +V+ DSQ+AI+LAKNQV+HARTKHIDVRFHFVREIIDEG I LQKI ADNLADM+TK + +
Sbjct: 764 MNEQTKAVSTPLASHFKLSAQLSPSTNTEQEYMLQVPYSNAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYIHKTMDIGLLFKQDTTLGKCVVGYVDSDYAGDLDKRRSTTGYVFTLAGGPISWKSTLQSTVALSTTEAEYMAVTEAVKEAIWLQGMVKTLGLVQEHFNVYCDSQSAIHLAKNQVYHARTKHIDVRFHFVREIIDEGKIHLQKIKTADNLADMMTKVLKK 1006
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|14586968|gb|AAK70406.1|AF369930_1 (pol polyprotein [Citrus x paradisi]) HSP 1 Score: 269.626 bits (688), Expect = 1.074e-87 Identity = 136/242 (56.20%), Postives = 171/242 (70.66%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI---------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQV 209
M++ +K V TPLA FKLS+S P+ EE YMA +PYAS + SL YAMVCTR DISQAVS+ K GQ VGY DSD+AGDLDK+RST+G+VFT+ GG VSWRSILQST+ALSTTEA+Y+A TEA+KEAIWL+GLL DLG+ +++ V D+Q+AI+LAKNQ +HARTKHIDV++H+VREII+ GD+LL+KI DN +DMLTK V++V
Sbjct: 41 MDDKTKLVCTPLALHFKLSSSSCPRSQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEV 282
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|1356591429|ref|WP_105280124.1| (hypothetical protein [Escherichia coli] >gi|1349429132|gb|PPY92730.1| hypothetical protein C5P31_25790 [Escherichia coli]) HSP 1 Score: 259.996 bits (663), Expect = 1.788e-83 Identity = 128/230 (55.65%), Postives = 160/230 (69.57%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI---------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADN 197
+++ +KPVSTPLA+ FKLS +MSP E YM+++PYA+ + SL YAMVCTR DISQAV + ++ Q VVGY DSD+AGDLDKRRSTTG+VFT PVSW+S LQSTVALSTTEA+YMA+TEA+KEAIWLQGLL +LG++ + + DSQ+AI LAKNQV+HARTKHIDVR+HFVREII+EG I ++KI +N
Sbjct: 84 IDDKTKPVSTPLASHFKLSTTMSPMDEAEREYMSKVPYANVVGSLMYAMVCTRPDISQAVGVISRYMHNPGKEHWQAVKWILRYIHNTVDVGLVFEQEDNQSVVGYCDSDFAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMAITEAVKEAIWLQGLLKELGVEQKSITIFCDSQSAIQLAKNQVYHARTKHIDVRYHFVREIIEEGGITVKKIHTTEN 313
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|108863072|gb|ABG22121.1| (polyprotein, partial [Solanum melongena]) HSP 1 Score: 252.292 bits (643), Expect = 5.449e-80 Identity = 125/209 (59.81%), Postives = 149/209 (71.29%), Query Frame = 0
Query: 1 MNENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVR 174
+N++SKPVSTPLA KLS+ +SPK EE YMA++PYA+A+ SL YAMVCTR DISQAVS+ DK G CVVGY DSDYAGDLDKRRSTTG++FT+ GPVSW+S LQ+TVALSTTEA+YMA+TEA+KEAIWL GLL++LG+ H+ VH DSQ+AI+LAKNQV HARTKHIDVR
Sbjct: 153 INDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVPYANAVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLHGLLEELGVGQKHLMVHSDSQSAIHLAKNQVFHARTKHIDVR 361
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|147859193|emb|CAN79684.1| (hypothetical protein VITISV_003855 [Vitis vinifera]) HSP 1 Score: 239.58 bits (610), Expect = 2.011e-74 Identity = 115/236 (48.73%), Postives = 160/236 (67.80%), Query Frame = 0
Query: 3 ENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSI----------------------------------DKVTGQCVVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTK 204
+N+KPVSTPLA F+LS S PK E + M+++PYASA+ L YAMVCTR+D++ AVS+ + + V GYVD+DYAGDLD+RRST G+VFT+ GGP+ W+S++QS VAL TT+++YMA+ E KE++WL GL+ +LGIQ V +++D+Q+AIYL KNQV+HARTKHIDVRFH + E++ G++LL+K+ ++N ADMLTK
Sbjct: 157 DNAKPVSTPLANHFRLSTSQCPKTDGEVNDMSKVPYASAVGCLMYAMVCTRLDLAHAVSVVSKFLSNPGRMNWDAVKWIFRYLRGTTDYGITFSKQQSDPSVKGYVDADYAGDLDERRSTIGYVFTLGGGPICWKSMIQSLVALYTTKSEYMAIAETTKESLWLTGLVKELGIQQGGVQLYFDNQSAIYLEKNQVYHARTKHIDVRFHKISELVSSGELLLKKVHTSENAADMLTK 392
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|1335210537|gb|PNX69499.1| (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense]) HSP 1 Score: 233.032 bits (593), Expect = 2.700e-74 Identity = 118/207 (57.00%), Postives = 146/207 (70.53%), Query Frame = 0
Query: 33 MAQIPYASAISSLTYAMVCTRIDISQAVSI-----------------------DKVTGQCVV---------GYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVA 207
M +PYASA+ SL YAMVCTR DISQAVS+ C+ G+VDSDYAGDLD+RRSTTG+VF I G PVSWRS+LQSTVALSTTEA+YMAV E +KEA+WL+GLLDDLG++ + V + DSQ+A++LAKNQVHHARTKHIDVR+HFVR++++EG+I L K+ +N ADMLTK V+
Sbjct: 1 MEHVPYASAVGSLMYAMVCTRSDISQAVSVVSRFMANPGKTHWEAVKWILRYLKGTIDTCLCFGGDACHINGFVDSDYAGDLDRRRSTTGYVFQIHGVPVSWRSMLQSTVALSTTEAEYMAVAEGVKEALWLRGLLDDLGMKQECVKLSCDSQSALHLAKNQVHHARTKHIDVRYHFVRDVVEEGNISLTKVHTDENSADMLTKVVS 207
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|674233416|gb|KFK26181.1| (hypothetical protein AALP_AA8G213400 [Arabis alpina]) HSP 1 Score: 237.654 bits (605), Expect = 3.568e-74 Identity = 123/238 (51.68%), Postives = 161/238 (67.65%), Query Frame = 0
Query: 4 NSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVS--------------------IDKVTG-----------QCV--VGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFVAQ 208
+SKPVSTPL + F++SA PK +E MAQ+PYASA+ L YAMVCTR D++QAVS + + G +CV +GYVDSDYAGDLD RR TTG+VFT+ GPVSWRS+LQ VA+ST EA+YMA+ EA KEA+W+QGL+ +L ++ V +H DSQ+A+YLAKNQV+ ARTKHI V +H +RE++ GDILL+K+ ++N ADMLTK V +
Sbjct: 121 DSKPVSTPLVSHFRVSADQFPKSDDEIRDMAQVPYASAVRCLMYAMVCTRPDLAQAVSEVSKYMSNPGRDHWNDVKWILRYLKGTAEYGLRFGDLKCVAVLGYVDSDYAGDLDNRRYTTGYVFTLAEGPVSWRSVLQDVVAMSTMEAEYMAMGEAAKEALWVQGLVAELSVERGGVLLHGDSQSAMYLAKNQVYRARTKHIQVTYHKIRELVASGDILLEKVHTSENTADMLTKPVTE 358
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|1347724704|gb|PPS20553.1| (hypothetical protein GOBAR_AA00016 [Gossypium barbadense]) HSP 1 Score: 247.284 bits (630), Expect = 6.680e-72 Identity = 125/238 (52.52%), Postives = 157/238 (65.97%), Query Frame = 0
Query: 3 ENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSIDKVTGQC----------------------------------VVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFV 206
+ +K VSTPLA FKLSA +SP+ EE M+ IPY+SA+ S+ YAMVCTR DIS AVS+ C V GYVDSDYAGDLDKRRS TG+VFT GG +SW+++LQSTVALSTTEA+YMA+ EA+KEA+W++GL+ LG+Q D V DSQ+AI+L KNQ+ H RTKHIDVR+HFVRE + +GDI++ K+ N ADMLTK +
Sbjct: 1567 DKAKTVSTPLAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQSDCTSSVTGYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMFHERTKHIDVRYHFVREHVTQGDIVISKVATEKNPADMLTKVI 1804
BLAST of PARG00189m01 vs. NCBI nr
Match: gi|1347680716|gb|PPR84446.1| (hypothetical protein GOBAR_AA36262 [Gossypium barbadense]) HSP 1 Score: 246.899 bits (629), Expect = 8.863e-72 Identity = 125/238 (52.52%), Postives = 157/238 (65.97%), Query Frame = 0
Query: 3 ENSKPVSTPLAAPFKLSASMSPKIGEESHYMAQIPYASAISSLTYAMVCTRIDISQAVSIDKVTGQC----------------------------------VVGYVDSDYAGDLDKRRSTTGFVFTIVGGPVSWRSILQSTVALSTTEAKYMAVTEAIKEAIWLQGLLDDLGIQHDHVDVHYDSQNAIYLAKNQVHHARTKHIDVRFHFVREIIDEGDILLQKIGAADNLADMLTKFV 206
+ +K VSTPLA FKLSA +SP+ EE M+ IPY+SA+ S+ YAMVCTR DIS AVS+ C V GYVDSDYAGDLDKRRS TG+VFT GG +SW+++LQSTVALSTTEA+YMA+ EA+KEA+W++GL+ LG+Q D V DSQ+AI+L KNQ+ H RTKHIDVR+HFVRE + +GDI++ K+ N ADMLTK +
Sbjct: 1588 DKAKTVSTPLAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQSDCTSSVTGYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMFHERTKHIDVRYHFVREHVTQGDIVISKVATEKNPADMLTKVI 1825 The following BLAST results are available for this feature:
BLAST of PARG00189m01 vs. ExPASy TrEMBL
Analysis Date: 2019-12-09 (blastp of Prunus armeniaca v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of PARG00189m01 vs. Araport11
Analysis Date: 2019-12-09 (blastp of Prunus armeniaca v1.0 proteins vs Araport11) Total hits: 3
BLAST of PARG00189m01 vs. ExPASy Swiss-Prot
Analysis Date: 2019-12-09 (blastp of Prunus armeniaca v1.0 proteins vs UniProt Swissprot) Total hits: 5
BLAST of PARG00189m01 vs. NCBI nr
Analysis Date: 2019-12-11 (blastp of Prunus armeniaca v1.0 proteins vs NCBI nr) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Prunus armeniaca v1.0 proteins
Date Performed: 2019-12-02
Sequences
The
following sequences are available for this feature:
mRNA sequence >PARG00189m01_v1.0 ID=PARG00189m01_v1.0; Name=PARG00189m01; organism=Prunus armeniaca; type=mRNA; length=735bpback to top protein sequence of PARG00189m01_v1.0 >PARG00189m01_v1.0 ID=PARG00189m01_v1.0; Name=PARG00189m01_v1.0; organism=Prunus armeniaca; type=polypeptide; length=209bpback to top mRNA from alignment at LG1:1223341..1224075+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>PARG00189m01_v1.0 ID=PARG00189m01_v1.0; Name=PARG00189m01; organism=Prunus armeniaca; type=mRNA; length=735bp; location=Sequence derived from: LG1:1223341..1224075+ (Prunus armeniacaback to top Coding sequence (CDS) from alignment at LG1:1223341..1224075+ >PARG00189m01_v1.0 ID=PARG00189m01_v1.0; Name=PARG00189m01; organism=Prunus armeniaca; type=CDS; length=630bp; location=Sequence derived from: LG1:1223341..1224075+ (Prunus armeniacaback to top |