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Fragaria x ananassa (strawberry)
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Prunus armeniaca (apricot)
Prunus avium and cerasus (sweet & tart cherry)
Prunus dulcis (almond)
Prunus persica (peach)
Prunus serotina (black cherry)
Pyrus (all species)
Pyrus communis (European pear)
Rosa (all species)
Rubus (all species)
Rubus occidentalis
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Data Template
Template
stock
download
Headers
Column
Description
*
stock_name
Primary ID or name of stock. The most important ID or name (unique and stable at least within the breeding program) should be in this column. For mapping population, follow the naming convention of each database.
*
stock_type
Select from the three choices (accession, population or panel).
accession_type
Types of an accession (breeding_research_material, cultivar, wild_unimproved, etc.). accession_type is required when the stock_type is accession.
*
genus
Genus to which the stock belongs to.
*
species
Species name. Enter 'sp.' to represent one unknown species, 'spp.' to represent multiple unknown species.
USDA_PI
USDA_PI in the GRIN database. Multiple USDA_PI, separated by comma or semi-colon, can be added.
institutional_name
Institutional name(s). separated by comma or semi-colon, can be added.
subspecies
Subspecies name.
description
Any description for the stock.
secondary_ID
Alternate ID or name that is commonly used to refer to the entry.
maternal_parent
Stock name of the maternal parnet. It must exist in stock table or listed in this sheet. If the organism of the parent and the child are different, add the organism as prefix of name of parent separated by double colon '::'. You need to add '#' to separate genus and species.
paternal_parent
Stock name of the paternal parnet. It must exist in stock table or listed in this sheet. If the organism of the parent and the child are different, add the organism as prefix of name of parent separated by double colon '::'. You need to add '#' to separate genus and species.
mutation_parent
Stock name of the mutation parent. It must exist in stock table or listed in this sheet. If the organism of the parent and the child are different, add the organism as prefix of name of parent separated by double colon '::'. You need to add '#' to separate genus and species.
selfing_parent
Stock name of the selfing parent. It must exist in stock table or listed in this sheet. If the organism of the parent and the child are different, add the organism as prefix of name of parent separated by double colon '::'. You need to add '#' to separate genus and species.
alias
Alias of a stock. Multiple aliases, separated by comma or semi-colon, can be added.
cultivar
Cultivar name if It is a named, cultivated variety.
pedigree
Any additional pedigree information: When the exact parents are not known, or any additional information beyond just parents (eg. Red-fruit sport of Jonathan, Pyrus sp. X Cydonia sp., etc.).
dataset_name
Name of the dataset that cross belongs to. This is required if 'cross_number' is specified.
cross_number
Cross number of a cross that generated the progeny; Must also be found in the Cross table.
advanced_to_2nd
Yes if it is advanced to 2nd phase, No otherwise. Leave it empty if the selection decision is yet to be made.
advanced_to_3rd
Yes if it is advanced to 3rd phase, No otherwise.
advanced_to_4th
Yes if it is advanced to 4th phase, No otherwise.
ploidy
Number of sets of chromosomes (e.g. 2x).
ploidy_equation
Equation of the ploidy of the plant. Example 2n = 2x = YY.
origin_detail
The origin for the variety (especially for wild variety).
origin_country
The original country for the variety (especially for wild variety).
population_size
Only for type 'population'.
germplasm_center
Stock center or lab where the stock is distributed. Otherwise, provide the details of the contact person in contact column (from whom the material can be obtained) in the 'Contact' sheet.
comments
Any comments on the stock.
image
Image ID of any associated image (Detailed info in 'Image' sheet.) Multiple images, separated by comma, can be added.
reference
Reference where the stock is originally described (pub_id), Multiple references, separated by comma, can be added.
##property_name
Special columns (##) : followed by name of the custom property.
*
Required field
cvterms
cv.name
cvterm.name
MAIN
USDA_PI
MAIN
accession
MAIN
accession_type
MAIN
advanced_to_2nd
MAIN
advanced_to_3rd
MAIN
advanced_to_4th
MAIN
alias
MAIN
comments
MAIN
cross_experiment
MAIN
cultivar
MAIN
description
MAIN
germplasm_center
MAIN
grin_type
MAIN
institutional_name
MAIN
is_a_maternal_parent_of
MAIN
is_a_mutation_parent_of
MAIN
is_a_paternal_parent_of
MAIN
is_a_selfing_parent_of
MAIN
maternal_parent
MAIN
mutation_parent
MAIN
origin_country
MAIN
origin_detail
MAIN
paternal_parent
MAIN
pedigree
MAIN
ploidy
MAIN
ploidy_equation
MAIN
population
MAIN
population_size
MAIN
progeny
MAIN
secondary_id
MAIN
selfing_parent
MAIN
subspecies
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