2022 Peer-reviewed papers citing GDR

2022 Peer-reviewed papers citing GDR (links to publication in bold, 63)

  1. Sirangelo, T. M., Rogers, H. J., & Spadafora, N. D. (2022). Multi-Omic Approaches to Investigate Molecular Mechanisms in Peach Post-Harvest RipeningAgriculture12(4), 553.
  2. Khan, I. A., Rahman, M. U., Sakhi, S., Nawaz, G., Khan, A. A., Ahmad, T., ... & Khan, S. M. (2022). PpMYB39 Activates PpDFR to Modulate Anthocyanin Biosynthesis during Peach Fruit MaturationHorticulturae8(4), 332.
  3. Jafari, M., Shiran, B., Rabiei, G., Ravash, R., Sayed Tabatabaei, B. E., Martínez-García, P. J., & Martínez-Gómez, P. (2022). Identification of genes associated with kernel size in almond [Prunus dulcis (Mill.) DA Webb] using RNA-SeqPlant Growth Regulation, 1-17.
  4. Jin, M., Gong, X., Zhang, Q., Chen, Y., Ma, H., Zhang, T., ... & Bao, J. (2022). Genome-wide analysis and expression pattern of the PIN gene family during Korla fragrant pear calyx developmentActa Physiologiae Plantarum44(5), 1-11.
  5. Xu, X.Z., Che, Q.Q., Cheng, C. X., Yuan, Y. B., & Wang, Y. Z. (2022). Genome-wide identification of WOX gene family in apple and a functional analysis of MdWOX4b during adventitious root formationJournal of Integrative Agriculture21(5), 1332-1345.
  6. Li, M., Wen, Z., Meng, J., Cheng, T., Zhang, Q., & Sun, L. (2022). The genomics of ornamental plants: current status and opportunitiesOrnamental Plant Research2(1), 1-18.
  7. Labadie, M., Vallin, G., Potier, A., Petit, A., Ring, L., Hoffmann, T., ... & Denoyes, B. (2022). High Resolution Quantitative Trait Locus Mapping and Whole Genome Sequencing Enable the Design of an Anthocyanidin Reductase-Specific Homoeo-Allelic Marker for Fruit Colour Improvement in Octoploid Strawberry (Fragaria× ananassa)Frontiers in plant science13, 869655.
  8. Han, X., Liu, K., Yuan, G., He, S., Cong, P., & Zhang, C. (2022). Genome-wide identification and characterization of AINTEGUMENTA-LIKE (AIL) family genes in apple (Malus domestica Borkh.)Genomics, 110313.
  9. Zhang, B., Qu, D., Yang, H., Long, X., Zhu, Z., Yang, Y., & Zhao, Z. (2022). Genome Wide Identification and Characterization of Apple WD40 Proteins and Expression Analysis in Response to ABA, Drought, and Low TemperatureHorticulturae8(2), 141.
  10. Yang, J., Wang, M., Zhou, S., Xu, B., Chen, P., Ma, F., & Mao, K. (2022). The ABA receptor gene MdPYL9 confers tolerance to drought stress in transgenic apple (Malus domestica)Environmental and Experimental Botany194, 104695.
  11. Khan, I. A., Cao, K., Guo, J., Li, Y., Wang, Q., Yang, X., ... & Wang, L. (2022). Identification of key gene networks controlling anthocyanin biosynthesis in peach flowerPlant Science316, 111151.
  12. Li, H., Zhao, Q., Wang, H., Dong, Q., & Xu, Y. (2022). Genome-Wide Identification, Expression Profiling and Protein-Protein Interaction Properties of the BEL-Like Homeodomain Gene Family in ApplePhyton91(2), 315.
  13. Li, J., Yang, S., Yang, X., Wu, H., Tang, H., & Yang, L. (2022). PlantGF: an analysis and annotation platform for plant gene familiesDatabasebaab088.
  14. Mir, Z., Ahmadi-Afzadi, M., Mirzaei, S., Maleki, M., & Rahimi, M. (2022). Evaluation of the ACC and BABA hormones on the expression of resistance genes in apple fruit challenged with Penicillium expansumJournal of Horticulture and Postharvest Research, 21-34.
  15. Sun, Y., Zhao, X., Gao, Y., Jiao, J., Sun, Y., Zhu, D., ... & Su, H. (2022). Genome-wide analysis of lectin receptor-like kinases (LecRLKs) in sweet cherry (Prunus avium) and reveals PaLectinL16 enhances sweet cherry resistance with salt stressEnvironmental and Experimental Botany194, 104751.
  16. Xu, R., Wang, L., Li, K., Cao, J., & Zhao, Z. (2022). Integrative transcriptomic and metabolomic alterations unravel the effect of melatonin on mitigating postharvest chilling injury upon plum (cv. Friar) fruitPostharvest Biology and Technology186, 111819.
  17. Chen, G., Yi, X., Zhao, B., Li, Y., Qiao, X., Gao, H., ... & Wang, J. (2022). Genome‑wide characterization of the Gα subunit gene family in Rosaceae and expression analysis of PbrGPAs under heat stressGene810, 146056.
  18. Tian, Y., Wang, Q., Zhang, H., Zhou, N., Yan, H., Jian, H., ... & Qiu, X. (2022). Genome-wide identification and evolutionary analysis of MLO gene family in Rosaceae plantsHorticultural Plant Journal8(1), 110-122.
  19. Li, M., Wang, L., Liu, Y., Lin, Y., Zhang, Y., Long, Y., ... & Luo, Y. (2022). Characterization and regulation mechanism analysis of ubiquitin-conjugating family genes in strawberry reveals a potential role in fruit ripeningBMC plant biology22(1), 1-16.
  20. Zheng, L., Ma, W., Deng, J., Peng, Y., Tian, R., Yuan, Y., ... & Ma, B. (2022). A MdMa13 gene encoding tonoplast P3B-type ATPase regulates organic acid accumulation in appleScientia Horticulturae296, 110916.
  21. Dong, C., Zou, X., & Gao, Q. (2022). Genome-wide identification of Expansin in Fragaria vesca and expression profiling analysis of the FvEXPs in different fruit developmentGene, 146162.
  22. Lambert, P., Confolent, C., Heurtevin, L., Dlalah, N., Signoret, V., Quilot-Turion, B., & Pascal, T. (2022). Insertion of a mMoshan transposable element in PpLMI1, is associated with the absence or globose phenotype of extrafloral nectaries in peach [Prunus persica (L.) BatschHorticulture research9.
  23. Guo, W., Chen, W., Guo, N., Zang, J., Liu, L., Zhang, Z., & Dai, H. (2022). MdWRKY61 positively regulates resistance to Colletotrichum siamense in apple (Malus domestica)Physiological and Molecular Plant Pathology117, 101776.
  24. Zhong, Y., Chen, Z., & Cheng, Z. M. (2022). Different scales of gene duplications occurring at different times have jointly shaped the NBS-LRR genes in Prunus speciesMolecular Genetics and Genomics, 1-14.
  25. Li, H., Zhao, Q., Wang, H., Dong, Q., & Xu, Y. (2022). Genome-Wide Identification, Expression Profiling and Protein-Protein Interaction Properties of the BEL-Like Homeodomain Gene Family in ApplePhyton91(2), 315.
  26. Li, T. Y., Wang, S. X., Tang, X. G., Dong, X. X., & Li, H. (2022). The FvemiR167b-FveARF6 module increases the number of roots and leaves in woodland strawberryScientia Horticulturae293, 110692.
  27. Gao, M., Zhao, H., Zheng, L., Zhang, L., Peng, Y., Ma, W., ... & Ma, B. (2022). Overexpression of apple Ma12, a mitochondrial pyrophosphatase pump gene, leads to malic acid accumulation and the upregulation of malate dehydrogenase in tomato and apple calliHorticulture Research9.
  28. Wang, H., Song, C., Fang, S., Wang, Z., Song, S., Jiao, J., ... & Bai, T. (2022). Genome‑wide identification and expression analysis of the ASMT gene family reveals their role in abiotic stress tolerance in appleScientia Horticulturae293, 110683.
  29. Yang, J., Wang, M., Zhou, S., Xu, B., Chen, P., Ma, F., & Mao, K. (2022). The ABA receptor gene MdPYL9 confers tolerance to drought stress in transgenic apple (Malus domestica)Environmental and Experimental Botany194, 104695.
  30. Li, B., Zhang, X., Duan, R., Han, C., Yang, J., Wang, L., ... & Xue, H. (2022). Genomic Analysis of the Glutathione S-Transferase Family in Pear (Pyrus communis) and Functional Identification of PcGST57 in Anthocyanin AccumulationInternational Journal of Molecular Sciences23(2), 746.
  31. Zhang, Y., Li, S., Chen, Y., Liu, Y., Lin, Y., Li, M., ... & Tang, H. (2022). Heterologous overexpression of strawberry bZIP11 induces sugar accumulation and inhibits plant growth of tomatoScientia Horticulturae292, 110634.
  32. Liu, Y., Wang, X., Wang, X., Gao, W., & You, C. (2022). Identification and Functional Characterization of Apple MdCKX5. 2 in Root Development and Abiotic Stress ToleranceHorticulturae8(1), 62.
  33. Wen, Z., Hong, Y., Qiu, Z., Yang, K., Hou, Q., Qiao, G., & Wen, X. (2022). Identification of miRNAs mediating shoot growth of grafted sweet cherry through small RNA and degradome sequencingScientia Horticulturae291, 110557.
  34. Zhi, C., Ali, M. M., Alam, S. M., Gull, S., Ali, S., Yousef, A. F., ... & Chen, F. (2022). Genome-Wide In Silico Analysis and Expression Profiling of Phosphoenolpyruvate Carboxylase Genes in Loquat, Apple, Peach, Strawberry and PearAgronomy12(1), 25.
  35. Jiu, S., Xu, Y., Xie, X., Wang, J., Xu, J., Liu, X., ... & Zhang, C. (2022). Strigolactones affect the root system architecture of cherry rootstock by mediating hormone signaling pathwaysEnvironmental and Experimental Botany193, 104667. 
  36. Li, Y., Zheng, C., Wang, C., Golding, J. B., & Ru, L. (2022). Comparative transcriptome reveals molecular mechanism in apple genotypes differing in CO2 tolerance in CA storage. Postharvest Biology and Technology, 185, 111807.
  37. Sabir, I. A., Manzoor, M. A., Shah, I. H., Liu, X., Zahid, M. S., Jiu, S., ... & Zhang, C. (2022). MYB transcription factor family in sweet cherry (Prunus avium L.): genome-wide investigation, evolution, structure, characterization and expression patternsBMC plant biology22(1), 1-20.
  38. Zhang, L., Ma, B., Wang, C., Chen, X., Ruan, Y. L., Yuan, Y., ... & Li, M. (2022). MdWRKY126 modulates malate accumulation in apple fruit by regulating cytosolic malate dehydrogenase (MdMDH5)Plant Physiology.
  39. Gao, H., Tan, Q., Li, Q., Chen, G., Tang, C., Cao, P., ... & Wu, J. (2022). Characterization and Functional Explorations of O-glycosylation Enzymes SECRET AGENT and SPINDLY in Pyrus bretschneideriJournal of Plant Biology, 1-18.
  40. Dong, X., Guan, Y., Zhang, Z., & Li, H. (2022). miR390-tasiRNA3-ARF4 pathway is involved in regulating flowering time in woodland strawberryPlant Cell Reports, 1-14.
  41. Li, J., Zhang, M., Li, X., Khan, A., Kumar, S., Allan, A. C., ... & Wu, J. (2022). Pear genetics: Recent advances, new prospects, and a roadmap for the futureHorticulture Research9.
  42. Luo, J., Zhou, Y., Pan, Q., Mu, Q., & Gu, T. (2022). Characterization of YABBY genes and the correlation between their transcript levels and histone modifications in strawberryScientia Horticulturae295, 110815.
  43. Bai, Y., Liu, H., Lyu, H., Su, L., Xiong, J., & Cheng, Z. M. M. (2022). Development of a single-cell atlas for woodland strawberry (Fragaria vesca) leaves during early Botrytis cinerea infection using single cell RNA-seqHorticulture Research.
  44. Yu, H., Zhang, W., Kang, Y., Fan, Y., Yang, X., Shi, M., ... & Qin, S. (2022). Genome-wide identification and expression analysis of wall-associated kinase (WAK) gene family in potato (Solanum tuberosum L.)Plant Biotechnology Reports, 1-15.
  45. Yi, X., Gao, H., Yang, Y., Yang, S., Luo, L., Yu, C., ... & Pan, H. (2022). Differentially Expressed Genes Related to Flowering Transition between Once-and Continuous-Flowering RosesBiomolecules12(1), 58.
  46. Zhang, S., Wang, X., Xu, Z., Shi, P., Gu, M., Kang, T., ... & Zhao, C. (2022). PrupeFUL4 regulates ripening and softening of peach fruits through ethylene biosynthesisActa Physiologiae Plantarum44(2), 1-14.
  47. Súnico, V., Higuera, J. J., Molina-Hidalgo, F. J., Blanco-Portales, R., Moyano, E., Rodríguez-Franco, A., ... & Caballero, J. L. (2022). The Intragenesis and Synthetic Biology Approach towards Accelerating Genetic Gains on Strawberry: Development of New Tools to Improve Fruit Quality and Resistance to PathogensPlants11(1), 57.
  48. Tian, Y., Zhang, C. X., Zhu, C. Y., An, X. H., & Cong, P. H. (2022). Functional Characterization of Apple MdTGA2. 1 in Arabidopsis with Reduced SA Sensitivity and Increased Stress ToleranceJournal of Plant Growth Regulation, 1-10.
  49. Xu, Y., Xing, Y., Wei, T., Wang, P., Liang, Y., Xu, M., ... & Feng, L. (2022). Transcription Factor RrANT1 of Rosa rugosa Positively Regulates Flower Organ Size in Petunia hybridaInternational Journal of Molecular Sciences23(3), 1236.
  50. Coupel‐Ledru, A., Pallas, B., Delalande, M., Segura, V., Guitton, B., Muranty, H., ... & Costes, E. (2022). Tree architecture, light interception and water use related traits are controlled by different genomic regions in an apple tree core collectionNew Phytologist.
  51. Zhang, Y., Ma, Y., Guo, Y., Chen, Y., Yang, M., Fu, R., & Sun, Y. (2022). Physiological and iTRAQ-based proteomic analyses for yellowing of postharvest broccoli heads under elevated O2 controlled atmosphereScientia Horticulturae294, 110769.
  52. Xu, Z., Dai, J., Su, W., Wu, H., Shah, K., Xing, L., ... & Zhao, C. (2022). Selection and Validation of Reliable Reference Genes for Gene Expression Studies in Different Genotypes and TRV-Infected Fruits of Peach (Prunus persica L. Batsch) during RipeningGenes13(1), 160.
  53. Hu, Y., Sun, H., Han, Z., Wang, S., Wang, T., Li, Q., ... & Wu, T. (2022). ERF4 affects fruit ripening by acting as a JAZ interactor between ethylene and jasmonic acid hormone signaling pathwaysHorticultural Plant Journal.
  54. Wang, S., Shi, M., Zhang, Y., Pan, Z., Xie, X., Zhang, L., ... & Zhao, J. (2022). The R2R3-MYB transcription factor FaMYB63 participates in regulation of eugenol production in strawberryPlant Physiology.
  55. Li, B., Zhu, L., Jin, Y., Peng, Y., Feng, Z., Yang, N., ... & Li, M. (2022). Effects of two apple tonoplast sugar transporters, MdTST1 and MdTST2, on the accumulation of sugar. Scientia Horticulturae293, 110719.
  56. Ciacka, K., Tyminski, M., Gniazdowska, A., & Krasuska, U. (2022). Nitric Oxide as a Remedy against Oxidative Damages in Apple Seeds Undergoing Accelerated AgeingAntioxidants11(1), 70.
  57. Yang, J., Song, J., & Jeong, B. R. (2022). Side Lighting Enhances Morphophysiology and Runner Formation by Upregulating Photosynthesis in Strawberry Grown in Controlled Environment. Agronomy12(1), 24.
  58. Dong, Q., Duan, D., Zheng, W., Huang, D., Wang, Q., Yang, J., ... & Mao, K. (2022). Overexpression of MdVQ37 reduces drought tolerance by altering leaf anatomy and SA homeostasis in transgenic appleTree Physiology42(1), 160-174.
  59. Petrasch, S., Mesquida-Pesci, S. D., Pincot, D. D., Feldmann, M. J., López, C. M., Famula, R., ... & Blanco-Ulate, B. (2022). Genomic prediction of strawberry resistance to postharvest fruit decay caused by the fungal pathogen Botrytis cinereaG312(1), jkab378.
  60. Zhou, Y., Qiao, Y., Ni, Z., Du, J., Xiong, J., Cheng, Z., & Chen, F. (2022). GDS: A Genomic Database for Strawberries (Fragaria spp.)Horticulturae8(1), 41
  61. Luo J, Zhou Y, Pan Q, Mu Q, Gu T. Characterization of YABBY genes and the correlation between their transcript levels and histone modifications in strawberry. Scientia Horticulturae. 2022 Mar 15;295:110815\
  62. Hu ZL, Park CA, Reecy JM. Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services. Nucleic acids research. 2022 Jan 7;50(D1):D956-61.