COX1, EU701209.1-COX1.m1 (mRNA) Rubus occidentalis

Transcript Overview
NameCOX1
Unique NameEU701209.1-COX1.m1
TypemRNA
OrganismRubus occidentalis (Black raspberry)
Sourcegenbank
Productcytochrome oxidase subunit 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX1EU701209.1-COX1Rubus occidentalisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EU701209.1-COX1.m1-cds1EU701209.1-COX1.m1-cds1Rubus occidentalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
COX1EU701209.1-COX1.p1Rubus occidentalispolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI187962339
nuccoreEU701209.1
Alignments
Feature NameTypeLocationAnalysis
EU701209 region EU701209:1..655+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>EU701209.1-COX1.m1 ID=EU701209.1-COX1.m1; Name=COX1; organism=Rubus occidentalis; type=mRNA; length=655bp
ggatatagggactctatatttcatcttcggtgctattgctggagtgatgg
gcacatgcttctcagtactgattcgtatggaattagcacgacccggcgat
caaattcttggtgggaatcatcaactttataatgttttaataacggctca
cgcttttttaatgatcttttttatggttatgccggcgatgataggtggat
ttggtaattggtttgttccgattctgataggtgcacctgacatggcattt
ccacgattaaataatatttcattctggttgttgccaccaagtctcttgct
cctattaagctccgccttagtagaagtgggtagcgggactgggtggacgg
tctatccgcccttaagtggtattaccagccattctggaggagctgttgat
ttagcaatttctagtcttcatctatctggtgtttcatccattttaggttc
tatcaattttataacaactatcttcaacatgcgtggacctggaatgacta
tgcatagattacccctatttgtgtggtccgttctagtgacagcattccta
cttttattatcacttcccgtactggcaggggcaattaccatgttattaac
cgatcgaaactttaatacaaccttttttgatcccgctggggggggagacc
ccata
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protein sequence of COX1

>EU701209.1-COX1.p1 ID=EU701209.1-COX1.p1; Name=COX1; organism=Rubus occidentalis; type=polypeptide; length=218bp
DIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAH
AFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLL
LLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAISSLHLSGVSSILGS
INFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLT
DRNFNTTFFDPAGGGDPI
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mRNA from alignment at EU701209:1..655+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EU701209.1-COX1.m1 ID=EU701209.1-COX1.m1; Name=COX1; organism=Rubus occidentalis; type=mRNA; length=655bp; location=Sequence derived from: EU701209:1..655+ (Rubus occidentalis
ggatatagggactctatatttcatcttcggtgctattgctggagtgatgg
gcacatgcttctcagtactgattcgtatggaattagcacgacccggcgat
caaattcttggtgggaatcatcaactttataatgttttaataacggctca
cgcttttttaatgatcttttttatggttatgccggcgatgataggtggat
ttggtaattggtttgttccgattctgataggtgcacctgacatggcattt
ccacgattaaataatatttcattctggttgttgccaccaagtctcttgct
cctattaagctccgccttagtagaagtgggtagcgggactgggtggacgg
tctatccgcccttaagtggtattaccagccattctggaggagctgttgat
ttagcaatttctagtcttcatctatctggtgtttcatccattttaggttc
tatcaattttataacaactatcttcaacatgcgtggacctggaatgacta
tgcatagattacccctatttgtgtggtccgttctagtgacagcattccta
cttttattatcacttcccgtactggcaggggcaattaccatgttattaac
cgatcgaaactttaatacaaccttttttgatcccgctggggggggagacc
ccata
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Coding sequence (CDS) from alignment at EU701209:1..655+

>EU701209.1-COX1.m1 ID=EU701209.1-COX1.m1; Name=COX1; organism=Rubus occidentalis; type=CDS; length=655bp; location=Sequence derived from: EU701209:1..655+ (Rubus occidentalis
ggatatagggactctatatttcatcttcggtgctattgctggagtgatgg
gcacatgcttctcagtactgattcgtatggaattagcacgacccggcgat
caaattcttggtgggaatcatcaactttataatgttttaataacggctca
cgcttttttaatgatcttttttatggttatgccggcgatgataggtggat
ttggtaattggtttgttccgattctgataggtgcacctgacatggcattt
ccacgattaaataatatttcattctggttgttgccaccaagtctcttgct
cctattaagctccgccttagtagaagtgggtagcgggactgggtggacgg
tctatccgcccttaagtggtattaccagccattctggaggagctgttgat
ttagcaatttctagtcttcatctatctggtgtttcatccattttaggttc
tatcaattttataacaactatcttcaacatgcgtggacctggaatgacta
tgcatagattacccctatttgtgtggtccgttctagtgacagcattccta
cttttattatcacttcccgtactggcaggggcaattaccatgttattaac
cgatcgaaactttaatacaaccttttttgatcccgctggggggggagacc
ccata
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