rubus_GDR_reftransV2_0000564, rubus_GDR_reftransV2_0000564 (contig) Rubus spp.
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_LACSS (Endonuclease MutS2 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=mutS2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.468e-20 Identity = 74/229 (32.31%), Postives = 123/229 (53.71%), Query Frame = 1 Query: 7 NACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQ----EYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILATKTTDD----GEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKL 669 NA MEFD L+PTYR+L GVPGRSNA +I+ RLGLP ++VD A++L S ++ +I D+E ++ EYQ L +E L + +LH++L A ++ E R +M + E A + + +KA + + I L+ + I + D G+ T ++ V++++ + + KVG+ V V+S G++ T++R SK VQ G +K+K+ Sbjct: 464 NASMEFDVATLQPTYRLLIGVPGRSNAFDISTRLGLPNSIVDQAKQLMNDESQDLNNMITDLENQRKAAETEYQALRHE----LTEATDLHQQLSTAYQQFFE----DRETEMTKAKEKA----NAIVEKAEVKADKVITKLRDMQMNQGAQIKENQLIDAKAELGQLHQETTLKKNKVLQRAK--RRQTLKVGDDVLVTSYGQRGTLIRQVDSK-NWEVQMGIIKMKI 677
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_FUSNN (Endonuclease MutS2 OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=mutS2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.217e-20 Identity = 71/231 (30.74%), Postives = 125/231 (54.11%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQEL---LYEAQNHLMISRE--LHEKLLVAKRK--IMEHGSNQRFRQMREI-SEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILATKTTDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKL 669 E A MEF+ L PTYR+L G+PG SNA+ IA+R+GLP +++ ARE + ++++I +++ QE E+ Q + RE E L++ K+K I++ + + M E+ ++A+A+ I H++ K+ I +K ++L+T ++ ++ VVKK + K KVG+ VFV S+ + A +L++ SKE +VQ+G +KL++ Sbjct: 460 IETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARLDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQI--------QKNLNMLSTALREEKNKTV-------EVVKKIKT-KVNF-KVGDRVFVKSINQFANILKINTSKESAMVQSGILKLEV 673
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_SYNY3 (Endonuclease MutS2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mutS2 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.515e-19 Identity = 71/234 (30.34%), Postives = 122/234 (52.14%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKL------LVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQ---PTFERKRQHILATKTTDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENA +EFD+ +L PTYR+LWG+PGRSNA+ IA+RLGLP +V+ A++ G S I++VI +E ++E ++ AQ L + ++++ L A+ + ++ +Q +Q A+++ IR LQ P+ ++ +Q AT+ G I + E++A K +P P VG + + S G+ A V +V + + + V G MK+ + + Sbjct: 494 FENASVEFDDQSLSPTYRLLWGIPGRSNALAIAQRLGLPLAIVEQAKDKLGGFSEDINQVIAGLESQRREQEQKAANAQKLLQETEIFYQQVSQKAASLQARERELKSYQDQEVQQAI--------------AAAKEEIAKVIRQLQRGKPSAQKAQQ---ATEIL----GQI--QAEQKA--KVAPKPIGYQPTVGERIRIPSFGQTAEVTQVNATAQTVNVTLGLMKMTVPM 702
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_LACPL (Endonuclease MutS2 OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=mutS2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.173e-18 Identity = 72/233 (30.90%), Postives = 121/233 (51.93%), Query Frame = 1 Query: 7 NACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILATKTTD-----DGEGSITTRRERRAVVK-------KSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKL 669 NA MEFDE LKPTYR+L G+PGRSNA++IA+RLG+P +VD AR L S ++ +I D+ +++ ++ + + S +LH +L K + QR Q+ E ++ A T + ++++ + ++ I L RK+Q T T D +G++ ++ + K K+ D E G+ V V S G++ ++R + K E VQ G +K+K+ Sbjct: 466 NASMEFDEETLKPTYRLLVGIPGRSNALDIAQRLGIPQAIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLHLKTQVADSEKLHRQL-----KSEFNAYQQRKDQLIEDAKVQANT---IVEQSKTKADAIISDL-----RKKQLASGTATVKENELIDAKGALNALEQQPKLKKNRVLRRAKAQHDFHE----GDDVLVKSYGQRGVLMR-QMGKHEWEVQLGILKMKI 680
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_BREBN (Endonuclease MutS2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=mutS2 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.639e-18 Identity = 73/226 (32.30%), Postives = 115/226 (50.88%), Query Frame = 1 Query: 7 NACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPT----FERKRQHILATKTTDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLK 672 NA +EFD L+PTYR+L GVPGRSNA IA RLGLP +++D AR ++ +I +ER ++ + A+ + EL +L + + E N+R + + + A + A+++ E+ IR L+ E K ++ K G+ E+ V K + + + KVG+ V V+S G+K TVL + + EE LVQ G MK+K+K Sbjct: 464 NASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVARGSISEEDNQVESMIASLERNRKSAEADRLAAKAARQEAEELRTQLEEERAQFAEE-KNKRMERAEDEARIAV-------QLAKEEAETIIRELREMMAEGMEIKEHRLIDAKKR---LGNAVLELEKEKVKKPAKAVRATQIKVGDEVMVTSFGQKGTVLE-KVNNEEFLVQIGIMKMKVK 677
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_LACP3 (Endonuclease MutS2 OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441) GN=mutS2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.710e-17 Identity = 47/138 (34.06%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 7 NACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSL 420 NA MEFD L+PTYR+L GVPGRSNA +I+ RLGLPG +V+ A+ + + S ++ +I D+E+ ++ + A+ L ++ +H++L A +K + +R Q+++ + A + L KA+ + + I+ L Sbjct: 463 NASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKF----TTERDAQLQQAKDKA----NTLVDKAQTKADKIIKQL 592
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOTH (Endonuclease MutS2 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) GN=mutS2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.439e-17 Identity = 69/234 (29.49%), Postives = 121/234 (51.71%), Query Frame = 1 Query: 4 ENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSL----QPTFERKRQ------HILATKTTDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 ENAC EF+ L+PTYR+L GVPG+SNA I++RLGL ++++ A+E +++++ +E+ + + +A+++ + + +L ++L KRK+ E+ + R I EA A R IL +ARK+ E I + Q +RQ + + D E ++ + + K P E K G+ V + +L +K TV+ E++VQAG MK+ + + Sbjct: 464 ENACCEFNVETLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFLTQDDIKFEDMLMSIEKNLNQSENEKMKAESYRLEAEKLKKELEEQKRKLAEN-------RERLIQEARAEARKILL-EARKEAEEIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLELPLAPKNALVKPP----ENLKPGDSVLIVNLDQKGTVITPPDKDGEVVVQAGIMKINVHI 685
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_HALOH (Endonuclease MutS2 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=mutS2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.479e-17 Identity = 70/235 (29.79%), Postives = 116/235 (49.36%), Query Frame = 1 Query: 4 ENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGS---NQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHI--------LATKTTDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 ENA +EFD L+PTYR+L G+PG SNA IA +LGLP +++ + +EL ++ +I D+ +++Y++L E+ E+L K+K ++ S + R+ + I+EA I+ KK RK+ + +R L+ R I L K T E I+ +R+ K + + G+ V + G+K V+ V+ K E ++QAG MK+ L Sbjct: 468 ENASVEFDMETLQPTYRLLMGIPGGSNAFEIALKLGLPHDIIKDGKELMSGDDIKVENIISDLNEERKKYEQL----------KIEIEERLEAVKKKEQKYDSLLTDLEKRKKKLITEAREEALQII-KKTRKESKEILRRLKNKEFASRSDIDRVENEINLNLKET---EKEISEKRQ-----NKDGRTRVKEISCGDQVRLKKTGQKGEVISVDREKGEAVIQAGIMKVTTGL 683
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_OCEIH (Endonuclease MutS2 OS=Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) GN=mutS2 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.542e-16 Identity = 71/228 (31.14%), Postives = 121/228 (53.07%), Query Frame = 1 Query: 7 NACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMRE-ISEAAAMTRSILHKKARKQRESAIRSLQPTFE----RKRQHILATKTTDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVL-RVEPSKEEILVQAGNMKLKLK 672 NA +EF+ LKPTYR+L GVPGRSNA +I+ RLGL ++ A+ L G S ++ +I +E+ E ++ +A + L+ S +L R +EH N F Q +E + + A +KAR++ E+ + ++ + ++ + I A K D+ + ++T ++ V K D+ P G+ + + ++ + VL RV S +E LVQ G MK+K+K Sbjct: 461 NASVEFNVETLKPTYRLLIGVPGRSNAFDISTRLGLERATIERAKSLIGVDSKSVENMIASLEKSHLEAEQDYEQAHDVLLESEKL--------RNALEHEWN-LFEQKKEKLYKKAEEKAEKAIQKAREEAETIVSEMRQMKDSAGLKEHEWIEARKMLDEAKPNLTKNGNQKQVDPKPVEDRQLQP--GDEIKLLTVNQMGEVLERV--SDKEYLVQVGIMKVKVK 675
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Match: MUTS2_THERP (Endonuclease MutS2 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=mutS2 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.406e-16 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMER 198 ENA +EFD V L PTYR+L G+PGRS+A+ +A RLGLP +V+ AREL G+ + +D +I +M+R Sbjct: 472 LENASVEFDPVTLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELLGSGAPQLDRLIAEMQR 537
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: M5XS10_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001618mg PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 7.182e-109 Identity = 171/228 (75.00%), Postives = 191/228 (83.77%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILAT---KTTDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENACMEFD+V LKPTYRILWGVPGRSNAINIAERLGLPG VVDNARELYGAASAGIDEVI+DMERLKQ +Q+LLYE Q+HLM+SRE +EKLLVAKRK MEH ++QR R+MREISEAAAM RSILHKK R+ R S ++ LQP K QH L T +TTDD + ERR+ S S+KFELPKVGN+VFVSSLGKKATVL+VEPSKEEI+VQAGNMKLKLKL Sbjct: 564 FENACMEFDDVKLKPTYRILWGVPGRSNAINIAERLGLPGKVVDNARELYGAASAGIDEVIIDMERLKQGFQKLLYEGQHHLMLSRESYEKLLVAKRKTMEHSNDQRLRKMREISEAAAMARSILHKKVRQHRASLVQPLQPALTHKSQHKLETNSQRTTDDKH-----QMERRSASFLSSSEKFELPKVGNVVFVSSLGKKATVLKVEPSKEEIVVQAGNMKLKLKL 786
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: B9I2A9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s00450g PE=4 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 2.217e-91 Identity = 149/228 (65.35%), Postives = 184/228 (80.70%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILATKTTDDGEGSITTRRERRAVVK--KSPSDKF-ELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENACMEFDEVNLKPTY+ILWGVPGRSNAINI+E+LGLP VV NAREL+GAASA I+EVI+DMER KQ+ QELL+EA++HLM+S+ LHEKL +A+RKI EHG+ QR+R+MR+ISEAA+M RSILHKK R+ R A ++ QPT ++K+ ++ T + + T +VV+ K PS ELP+VG+MV VSSLG+KATVLRV+ SKEEILVQAGNMKLKLKL Sbjct: 429 FENACMEFDEVNLKPTYKILWGVPGRSNAINISEKLGLPSVVVSNARELHGAASAEINEVIIDMERFKQDSQELLHEARHHLMLSKNLHEKLKLARRKIKEHGTEQRYRKMRQISEAASMARSILHKKVRQLRAHATQTFQPTADQKQLSTSDSRFTAEAKNGRPTESMSTSVVEINKQPSAAMTELPEVGDMVQVSSLGRKATVLRVDRSKEEILVQAGNMKLKLKL 656
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: A0A067LMH3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14917 PE=4 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.864e-89 Identity = 149/234 (63.68%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHI-LATKTTDD--------GEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENACMEFDEVNLKPTY+ILWGVPGRSNAINI+E+LGLPG V+ NARELYG ASA I+EVI+DMER KQ++QELL+EAQ+HLM+SR LHEKLL +++KIMEHGS+QRFR+M+EISEAAAM RSILH+KAR+ R + QP KRQH+ + TT+D G S R+ V+++ +LP+VG+ V V SLG+KATVL+V+ SKEEI+VQAG+MKLKLKL Sbjct: 604 FENACMEFDEVNLKPTYKILWGVPGRSNAINISEKLGLPGIVISNARELYGTASAEINEVIIDMERFKQDFQELLHEAQHHLMLSRNLHEKLLQSRKKIMEHGSSQRFRKMQEISEAAAMARSILHRKARQLRARLTKPSQPPTASKRQHLAIDQHTTEDKNEHTAASGHSSAVEIRKHSLSVRRT-----KLPQVGDTVQVLSLGRKATVLKVDKSKEEIVVQAGSMKLKLKL 832
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: F6H7A2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00680 PE=4 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 6.752e-89 Identity = 148/230 (64.35%), Postives = 180/230 (78.26%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILATK----TTDDGEGSITTRRERRA-VVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENACMEFDEVNLKPTY+ILWG+PGRSNAINIAERLG+P V+D ARE YGAASA I+EVI+DMER KQE+QE + +A+ +LM+SR+L+E LLV KRK+MEHG+NQR+ +MRE+SEAAA+ RS+LHKK R+ R SA R QPT K QH AT D E T+ + A V ++S S+K +PKVG+MV VSSLGKKATVL VE SK +++VQAGNMKLKLKL Sbjct: 584 FENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTAADKSQHASATSNQHTAADINERPTTSESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGKKATVLEVESSKGQLVVQAGNMKLKLKL 813
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: W9QX42_9ROSA (MutS2 protein OS=Morus notabilis GN=L484_001580 PE=4 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.891e-84 Identity = 146/231 (63.20%), Postives = 177/231 (76.62%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQ---PTFERKRQHILATKT----TDDGEGSITTRRERRAVVKKSPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLK 672 FENACMEFDEVNLKPTY+ILWGVPGRSNAINIAERLGLP VV+ ARELYG ASA IDE+ILDMERLKQEYQELL E+Q+HLM+SR+LHEKLLV + KIM+H + QR +MR ISEAA+ +RSILH K R++RESAIR L + K H AT + +D+ + + K+SPS K++ PKVG+MV+++SL KK TVLRV+ K E+LVQAG+MKLKLK Sbjct: 569 FENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPSIVVEKARELYGVASAEIDEIILDMERLKQEYQELLEESQHHLMLSRDLHEKLLVVRTKIMKHAAEQRSWKMRVISEAASRSRSILHWKVRERRESAIRPLNLQTAKADHKSNHETATSSQNTPSDESPKAYSNSPSVAEDAKQSPSGKYKPPKVGDMVYITSLRKKGTVLRVDQFK-ELLVQAGSMKLKLK 798
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: A0A151U0B9_CAJCA (MutS2 protein OS=Cajanus cajan GN=KK1_005370 PE=4 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 3.625e-82 Identity = 146/239 (61.09%), Postives = 178/239 (74.48%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARK----QRESAIRSLQPTFERKRQHILATKTTDDGEGSITTRR-ERRAVVKKSPS---------DKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENACMEFDEVNLKPTY+ILWGVPGRSNAINIAERLGLP +VVDNAR+LYG+ASA IDEVI DMERLKQ+YQELL EA+++LM SREL+ LL +RKIMEH +N RF++MR++SEAAAM RSILHKK R+ ++++ + +P+ T D+ E +IT + R V +S S K E PKVG+MV VSSLG+K TVL+V+ SK EI+VQAGNMKLKLKL Sbjct: 542 FENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPSDVVDNARKLYGSASAEIDEVITDMERLKQDYQELLDEARHYLMHSRELYNSLLNTRRKIMEHSTNLRFKKMRDVSEAAAMARSILHKKVRELDVSTKQTSQNNKEPSRSSDSSATSQT-AADNKEPTITDKSASARKVFNQSRSVVIHLIEVAGKSEPPKVGDMVHVSSLGRKVTVLKVDSSKGEIVVQAGNMKLKLKL 779
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: A0A1Q3DAG4_CEPFO (MutS_V domain-containing protein OS=Cephalotus follicularis GN=CFOL_v3_32856 PE=4 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 9.339e-82 Identity = 141/226 (62.39%), Postives = 171/226 (75.66%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILATKTTDDGEGSITTRRERRAVVKKSPSDK-FELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENACMEFDEVN +PTY+ILWG+PGRSNAINIAE LGLP VVDNARELYGAA A I++VI++MERLKQ +QELLY A+++L +S++LHE LL + KIM HG QR+R+MR ISEAA +RS L K R+ R A + QP+ K Q+ILA+ D + + V+K+ PS K +LPK G+MV VSSLGKKATVLRVE SKEEI+VQAGNMKLKLKL Sbjct: 621 FENACMEFDEVNFRPTYKILWGIPGRSNAINIAELLGLPSTVVDNARELYGAAGADINKVIIEMERLKQIFQELLYGARHYLRLSKDLHENLLHTRSKIMVHGREQRYRKMRLISEAAEFSRSFLQNKVRQLRAYATQPSQPSRADKCQYILASN-NQDAAAVDSKKLSSLEVIKQVPSVKRTKLPKTGDMVHVSSLGKKATVLRVELSKEEIVVQAGNMKLKLKL 845
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: A0A1J7H7S6_LUPAN (Uncharacterized protein OS=Lupinus angustifolius GN=TanjilG_12828 PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 5.954e-81 Identity = 142/232 (61.21%), Postives = 172/232 (74.14%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQHILATK---TTDDGEGSITTRRERRAVVKK----SPSDKFELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLKL 675 FENACMEFD+VNLKPTY+ILWGVPGRSNAINIAERLGL VVD AR+LYG+ASA IDEVI DME+LKQ+YQELL E +HLM+SREL+ LL +RKIM+H SN R+++MR++SEAAAM RSILHKK R+ S + QP K AT T D + T + VKK SP D+ +LPKVG+MV V+SLG+KA VL+V+ SK EI+VQAG+MKLKLK+ Sbjct: 566 FENACMEFDDVNLKPTYKILWGVPGRSNAINIAERLGLTSVVVDGARKLYGSASAEIDEVITDMEKLKQDYQELLDEGHHHLMLSRELYNSLLSTRRKIMKHSSNLRYKKMRDVSEAAAMARSILHKKVRQLDASPKKPSQPNKTIKSSQSSATNNRHTAADSKEPTTIADGSASAVKKVNQLSP-DRSKLPKVGDMVNVTSLGRKAAVLKVDSSKGEIVVQAGSMKLKLKV 796
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: A0A1U8LPL1_GOSHI (endonuclease MutS2-like isoform X2 OS=Gossypium hirsutum GN=LOC107929573 PE=4 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.815e-80 Identity = 137/229 (59.83%), Postives = 179/229 (78.17%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQ----HILATKTTDDGEGSITTRRERRAVVKKSPSDKF-ELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLK 672 FENACMEFDE N KPTY+ILWGVPGRSNAINIAERLG+P +VDNARELYGAASA IDEVI+DME KQ++QEL+ E +++L +SR+LHEKLLV++RK+ + G+ QR+++MRE+SEAAA+ RS LHKK R+ R S ++ Q + KR+ + AT ++ +G+ + + V+K+ S+K ELPKVG+ V VSSLGK+ATVL+V+ SKEEI+VQAG MKLKLK Sbjct: 589 FENACMEFDEENFKPTYKILWGVPGRSNAINIAERLGVPSTIVDNARELYGAASAEIDEVIMDMETYKQKFQELIKECRHYLTMSRDLHEKLLVSRRKLQDLGAQQRYKKMRELSEAAAVARSTLHKKVRQLRTSTMKQSQLSKASKRKLANNYKHATAVENEPQGTNMSSSSIQ-VIKQPQSEKITELPKVGDTVHVSSLGKRATVLKVDTSKEEIVVQAGIMKLKLK 816
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Match: A0A1U8LTH5_GOSHI (endonuclease MutS2-like isoform X1 OS=Gossypium hirsutum GN=LOC107929573 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.645e-80 Identity = 137/229 (59.83%), Postives = 179/229 (78.17%), Query Frame = 1 Query: 1 FENACMEFDEVNLKPTYRILWGVPGRSNAINIAERLGLPGNVVDNARELYGAASAGIDEVILDMERLKQEYQELLYEAQNHLMISRELHEKLLVAKRKIMEHGSNQRFRQMREISEAAAMTRSILHKKARKQRESAIRSLQPTFERKRQ----HILATKTTDDGEGSITTRRERRAVVKKSPSDKF-ELPKVGNMVFVSSLGKKATVLRVEPSKEEILVQAGNMKLKLK 672 FENACMEFDE N KPTY+ILWGVPGRSNAINIAERLG+P +VDNARELYGAASA IDEVI+DME KQ++QEL+ E +++L +SR+LHEKLLV++RK+ + G+ QR+++MRE+SEAAA+ RS LHKK R+ R S ++ Q + KR+ + AT ++ +G+ + + V+K+ S+K ELPKVG+ V VSSLGK+ATVL+V+ SKEEI+VQAG MKLKLK Sbjct: 598 FENACMEFDEENFKPTYKILWGVPGRSNAINIAERLGVPSTIVDNARELYGAASAEIDEVIMDMETYKQKFQELIKECRHYLTMSRDLHEKLLVSRRKLQDLGAQQRYKKMRELSEAAAVARSTLHKKVRQLRTSTMKQSQLSKASKRKLANNYKHATAVENEPQGTNMSSSSIQ-VIKQPQSEKITELPKVGDTVHVSSLGKRATVLKVDTSKEEIVVQAGIMKLKLK 825 The following BLAST results are available for this feature:
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy Swiss-Prot
Analysis Date: 2017-05-19 (Homology Analysis for Rubus GDR RefTrans V2 vs SwissProt) Total hits: 10
BLAST of rubus_GDR_reftransV2_0000564 vs. ExPASy TrEMBL
Analysis Date: 2017-05-22 (Homology Analysis for Rubus GDR RefTrans V2 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >rubus_GDR_reftransV2_0000564 ID=rubus_GDR_reftransV2_0000564; Name=rubus_GDR_reftransV2_0000564; organism=Rubus all species; type=contig; length=677bpback to top |