CPDCT016, CPDCT016 (genetic_marker) Prunus dulcis | GDR

Marker Overview

Marker Overview


Name	CPDCT016
Genbank ID	AY862453
Type	SSR
Species	Prunus dulcis
Germplasm	Texas
Source Type	Genomic DNA
Repeat Motif	(GA)19
PCR Condition	940C for 1 min, 35 cycles at 940C for 30 s, 620C for 30 s and 720C for 30 s, 720C for 5 min
Primer 1	CPDCT016.F primer: GGAAACCTGATTAGGGCACTT
Primer 2	CPDCT016.Forward Primer: GGAAACCTGATTAGGGCACTT
Primer 3	CPDCT016.R primer: GGTCTGCTATACTGACCTAGGATT
Primer 4	CPDCT016.Reverse Primer: GGTCTGCTATACTGACCTAGGATT
Product Length	196 bp
Publication	[view all]
Contact	P. Arus Maria Badenes

Contact

Name

Details

P. Arus

First name:	Pere
Last name:	Arus
Institution:	IRTA
Address:	Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:	pere.arus@irta.es

Maria Badenes

First name:	Maria
Last name:	Badenes
Institution:	Instituto Valenciano de Investigaciones Agrarias (IVIA)
Address:	Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113 Moncada, Valencia, Spain
Country:	Spain
Email:	badenes_mlu@gva.es

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
GDR Markers Database	2004-01-01
Alignment of genetic markers to Prunus persics v2.0	2019-04-11

Publications


Year	Publication
2005	Molecular ecology notes. 2005 Sept., v. 5, no. 3 p. 531-535. 1022686504ISSN 1471-8278

Germplasm


Stock Name	Type
Texas	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Prunus-TE-F2	G5	N/A	30.7	CPDCT016	View
2	Prunus-TxE-peachV2.0	LG5	N/A	30.7	CPDCT016	View

Alignments

Feature Name	Type	Location	Analysis
scaffold_5	supercontig	scaffold_5:13147442..13147897.	Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp05	chromosome	Pp05:13142212..13142667+	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)