RosBREED_snp_sweet_cherry_Pp5_12036633, RosBREED_snp_sweet_cherry_Pp5_12036633 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp5_12036633
AliasRosBREED_snp_sweet_5_12036633
ss490554222
rs271788676
Rsweet_5_12036633
dbSNP IDss490554222
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp5_12036633
TypeSNP
SNP AllelesA/C
SpeciesPrunus avium
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rsweet_5_12036633Rsweet_5_12036633Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp5_12036633RosBREED_snp_sweet_cherry_Pp5_12036633Prunus aviummarker_locus
ss490554222ss490554222Prunus aviummarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RL-F1-2015L5N/A30.79Rsweet_5_12036633View
2Prunus-TE-6K cherry SNP-estimate5N/A24.22RosBREED_snp_sweet_cherry_Pp5_12036633View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate5N/A45.93RosBREED_snp_sweet_cherry_Pp5_12036633View
4Sweet Cherry-RL-F1-2014L5N/A32.4RosBREED_snp_sweet_cherry_Pp5_12036633View
5Sweet Cherry-BTK-Black Tartarian-2013LG05N/A38.3ss490554222View
6Sweet Cherry-RL-Lapins-2013LG05N/A30.6ss490554222View
7Sweet Cherry-BTK-F1-2013LG05N/A36.3ss490554222View
8Sweet Cherry-RL-F1-2013LG05N/A30.9ss490554222View
Alignments
Feature NameTypeLocationAnalysis
scaffold_5 supercontig scaffold_5:12036633..12036633. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp05 chromosome Pp05:12031415..12031415. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr5 chromosome PAV_r1.0chr5:9685397..9685397. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)