RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1, RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1
Aliasss475882964
rs267615904
c475882964
SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1
AX-105212477
dbSNP IDss475882964
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1
50K SNP array for apple:RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTAGTGTAAAGAAACAAGTTAAAGAGATACTTACCT
3' Flanking SequenceCAAATTATGTGCTGAAAGAGACAGGTATTTGACA
SpeciesMalus x domestica
PolymorphismP_ RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1 ID=RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1|Name=RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TAGTGTAAAGAAACAAGTTAAAGAGATACTTACCTYCAAATTATGTGCTG
AAAGAGACAGGTATTTGACA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A57.2RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A34422352RosBREEDSNP_SNP_CT_34422352_Lg3_02030_MAF30_MDP0000908766_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC025327.30 contig MDC025327.30:2179..2179. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:34000013..34000013. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:34000012..34000012. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation