RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1, RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1
Aliasss475879636
rs267612582
a475879636
SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1
AX-105189107
dbSNP IDss475879636
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1
50K SNP array for apple:RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTTTTGAAATCACCTATTGTAGAATTATCAAAGAGA
3' Flanking SequenceGGGCTTAGGGCCCACATTCAACAATATCGATATA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1 ID=RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1|Name=RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TTTTGAAATCACCTATTGTAGAATTATCAAAGAGAYGGGCTTAGGGCCCA
CATTCAACAATATCGATATA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-2013-physical-Malus-domestica10N/A2791748RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC020600.370 contig MDC020600.370:1122..1122. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:3571895..3571895. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr10 chromosome Chr10:3421829..3421829. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation