RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1, RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1
Aliasss475878533
rs267611479
a475878533
SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1
AX-105177733
dbSNP IDss475878533
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTTTTTCATCCTCACCTGGGTTGCCTGACACATGTC
3' Flanking SequenceTCCTTCCACTTGTCCAACTGTGCAGTTGGTCCCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1 ID=RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1|Name=RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TTTTTCATCCTCACCTGGGTTGCCTGACACATGTCKTCCTTCCACTTGTC
CAACTGTGCAGTTGGTCCCA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A29.16RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1View
2Apple-M432-2013-physical-Malus-domestica6N/A5292763RosBREEDSNP_SNP_GT_5292763_Lg6_RosCOS1410_MAF10_MDP0000794927_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC001647.167 contig MDC001647.167:50984..50984. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:4682618..4682618. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr06 chromosome Chr06:4682617..4682617. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation