Rub_AX-566104058

Marker Overview
NameRub_AX-566104058
dbSNP IDN/A
SNP Array ID
13K SNP Array for Rubus:Affx-1240499534
Red_raspberry-KASP24:Rub_AX-566104058
Red_raspberry-KASP48:Rub_AX-566104058
TypeSNP
SNP AllelesY
5' Flanking SequenceTACTTTCAAATTCCCTGTGGGTCAAAATCAAGCAT
3' Flanking SequenceAGTAGCAGCAACCGGTAATCCATCTGGTCCTTTGA
SpeciesRubus spp.
Primer 1Rub_AX-566104058.KASP_Primer_Allele_C: GGATTACCGGTTGCTGCTACTG
Primer 2Rub_AX-566104058.KASP_Primer_Allele_T: ATGGATTACCGGTTGCTGCTACTA
Primer 3Rub_AX-566104058.KASP_Primer_Common: AAATTCCCTGTGGGTCAAAATCAAGCAT
Publication[view all]
ContactSara Montanari
Nahla Bassil
CommentSNP from Rubus occidentalis
Contact
NameDetails
Sara Montanari
First name:Sara
Last name:Montanari
Title:Assistant Project Scientist
Institution:Istituto Agrario San Michele all’Adige (IASMA) Research and Innovation Centre, Foundation Edmund Mach
Address:Via E. Mach 1, 38010 S. Michele all'Adige (TN) - ITALY
Country:Italy
Email:sara.montanari@fmach.it
Phone:530 754 5743
Keywords:germpalsm repository
Last update:07/27/2018
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
13K SNP Array for RubusSNP_chip
Red_raspberry-KASP24SNP_chip
Red_raspberry-KASP48SNP_chip
Sequence
>Rub_AX-566104058 ID=Rub_AX-566104058; Name=Rub_AX-566104058; organism=Rubus spp.; type=genetic_marker; length=71bp
TACTTTCAAATTCCCTGTGGGTCAAAATCAAGCATYAGTAGCAGCAACCG
GTAATCCATCTGGTCCTTTGA
Alignments
Feature NameTypeLocationAnalysis
Ro02 chromosome Ro02:8806759..8806759. Rubus occidentalis Whole Genome v3.0 Assembly & Annotation