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GWAS0001235
GWAS Overview
Annotated Terms
Genome Location
Germplasm
Publications
GWAS Overview
GWAS Label
GWAS0001235 [
MapViewer
]
Published Symbol
procyanidin B2
Trait Name
procyanidin B2 content
Trait Alias
N/A
GWAS Marker
RosBREEDSNP_SNP_AG_7605137_Lg9_00893_MAF20_1636210_exon1
GWAS Study
Apple_phytochemicals_GWAS_Kumar_2022
Genome Assembly
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Statistical Mothod
MLM
Experimental Model
N/A
GWAS Panel
New_Zealand_apples_Hawke's_Bay_344
LOD
N/A
P Value
1.7E-8
R2
N/A
Unique key
3626-procyanidin B2RosBREEDSNP_SNP_AG_7605137_Lg9_00893_MAF20_1636210_exon1MLM
Comments
N/A
Annotated Terms
The following terms have been associated with this GWAS:
Vocabulary:
Rosaceae Trait Ontology
Term
Definition
MAIN:000201221
procyanidin B2 content
Genome Location
Name
Type
Location
Analysis
MapViewer
MDC016998.143
contig
MDC016998.143:2188..2188
Malus x domestica Whole Genome v1.0 Assembly & Annotation
View
Chr09
chromosome
Chr09:4882239..4882239
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
View
Chr09
chromosome
Chr09:8467383..8467383
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
View
Publications
Year
Publication
2022
Kumar S, Molloy C, Hunt M, Deng CH, Wiedow C, Andre C, Dare A, McGhie T. GWAS provides new insights into the genetic mechanisms of phytochemicals production and red skin colour in apple.. Horticulture research. 2022; 9:uhac218.
Germplasm
Stock Name
Type
New_Zealand_apples_Hawke's_Bay_344
panel