GWAS0001967 | GDR

Annotated Terms

Genome Location

GWAS Overview


GWAS Label	GWAS0001967 [ MapViewer ]
Published Symbol	firmness
Trait Name	fruit firmness
Trait Alias	N/A
GWAS Marker	s5_15123033
GWAS Study	Sweet_cherry_cracking_firmness_GWAS_Crump_2022
Genome Assembly	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
Statistical Mothod	GAPIT
Experimental Model	N/A
GWAS Panel	ROSBREED_Washington_State_Crump_259
LOD	N/A
P Value	N/A
R2	N/A
Unique key	3742-firmnesss5_15123033GAPIT
PVE	3.4
Comments	N/A

Annotated Terms

The following terms have been associated with this GWAS:

Vocabulary: **Rosaceae Trait Ontology**
Term	Definition
MAIN:000192293	fruit firmness

Genome Location


Name	Type	Location	Analysis	MapViewer
Pp05	chromosome	Pp05:15117697..15117697	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)	View
PAV_r1.0chr5	chromosome	PAV_r1.0chr5:13413514..13413514	Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)	View

Publications


Year	Publication
2022	Crump WW, Peace C, Zhang Z, McCord P. Detection of Breeding-Relevant Fruit Cracking and Fruit Firmness Quantitative Trait Loci in Sweet Cherry via Pedigree-Based and Genome-Wide Association Approaches.. Frontiers in plant science. 2022; 13:823250.

Germplasm


Stock Name	Type
ROSBREED_Washington_State_Crump_259	panel