SNRK2.7, KJ868186.1-SNRK2.7.m1 (mRNA) Malus prunifolia

Transcript Overview


Name	SNRK2.7
Unique Name	KJ868186.1-SNRK2.7.m1
Type	mRNA
Organism	Malus prunifolia ()
Source	genbank
Product	sucrose non-fermenting-1-related protein kinase 2.7

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
KJ868186	region	KJ868186:1..1017 +	NCBI Rosaceae gene and mRNA sequences	n/a
Chr08	chromosome	Chr08:23559442..23561833 -	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a
chr11	chromosome	SNRK2.7:1..1017 . chr11:27171526..27173917 +		n/a
chr11	chromosome	SNRK2.7:1..1017 . chr11:31346434..31348825 -		n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJ868186.1-SNRK2.7.m1-cds1	KJ868186.1-SNRK2.7.m1-cds1	Malus prunifolia	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
SNRK2.7	KJ868186.1-SNRK2.7.p1	Malus prunifolia	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	672940866
nuccore	KJ868186.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at KJ868186:1..1017+
coding sequence from alignment at KJ868186:1..1017+

mRNA sequence

>KJ868186.1-SNRK2.7.m1 ID=KJ868186.1-SNRK2.7.m1; Name=SNRK2.7; organism=Malus prunifolia; type=mRNA; length=1017bp
atggagaggtatgagattgtgaaagatattgggtctgggaattttggggt
ggcaaggctggcaagagacaagctcaccagagaactctttgctgtcaagt
tcattgagagaggacacaagatagatgaacatgttcaaagggaaatcatg
aaccacagatcactgaagcatccgaatatcgttcgattcaaagaggtcct
gctgacaccaactcatctggccatagtgatggagtacgcggctgggggag
aactcttcgggagaatatgcagtgctggcagatttagtgaggatgaggca
aggtttttcttccagcagttgatatcaggagttaggtactgtcatttgat
gcaaatctgtcatagagaccttaagcttgaaaacacgctcttagacggca
gtccagcaccccgtgtaaaaatatgtgatttcggatactcaaagtcatta
ttgcattctcagcctaaatctactgtaggaacaccggcttatatagcacc
tgaagtcctatctaaaaaacaatatgatggaaagattgcagatgtttggt
cttgtggagtcaccttatatgtgatgatagttggagcatatccctttgaa
gatcctgaagaccctagaaactttagaaaaacaattgggcggattcttag
tgtgcagtacgcagttccagattatgtccgaatttcaattgaatgtagac
atctcgtatctcgtatcttcgttgaaaaccccgaaaagagaataaccatc
ccagaaatcaaaaaccacccttggtttctaaagaacttacctgtggaaat
gatggaaggaggaagttggcagtgcaaagacataaattatccgtcacaaa
gccttgaagaagtgatgtatataatacaagaggcaagaaaaccattaagc
gtcccggatgccagcaggcctctcatcggaagcagcagcatggatgttga
tgatcttgaagatgttgaagatattgaaacaagtggtggttttgtgttgc
caaataggagtaattag

protein sequence of SNRK2.7

>KJ868186.1-SNRK2.7.p1 ID=KJ868186.1-SNRK2.7.p1; Name=SNRK2.7; organism=Malus prunifolia; type=polypeptide; length=338bp
MERYEIVKDIGSGNFGVARLARDKLTRELFAVKFIERGHKIDEHVQREIM
NHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFGRICSAGRFSEDEA
RFFFQQLISGVRYCHLMQICHRDLKLENTLLDGSPAPRVKICDFGYSKSL
LHSQPKSTVGTPAYIAPEVLSKKQYDGKIADVWSCGVTLYVMIVGAYPFE
DPEDPRNFRKTIGRILSVQYAVPDYVRISIECRHLVSRIFVENPEKRITI
PEIKNHPWFLKNLPVEMMEGGSWQCKDINYPSQSLEEVMYIIQEARKPLS
VPDASRPLIGSSSMDVDDLEDVEDIETSGGFVLPNRSN

mRNA from alignment at KJ868186:1..1017+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJ868186.1-SNRK2.7.m1 ID=KJ868186.1-SNRK2.7.m1; Name=SNRK2.7; organism=Malus prunifolia; type=mRNA; length=1017bp; location=Sequence derived from: KJ868186:1..1017+ (Malus prunifolia
atggagaggtatgagattgtgaaagatattgggtctgggaattttggggt
ggcaaggctggcaagagacaagctcaccagagaactctttgctgtcaagt
tcattgagagaggacacaagatagatgaacatgttcaaagggaaatcatg
aaccacagatcactgaagcatccgaatatcgttcgattcaaagaggtcct
gctgacaccaactcatctggccatagtgatggagtacgcggctgggggag
aactcttcgggagaatatgcagtgctggcagatttagtgaggatgaggca
aggtttttcttccagcagttgatatcaggagttaggtactgtcatttgat
gcaaatctgtcatagagaccttaagcttgaaaacacgctcttagacggca
gtccagcaccccgtgtaaaaatatgtgatttcggatactcaaagtcatta
ttgcattctcagcctaaatctactgtaggaacaccggcttatatagcacc
tgaagtcctatctaaaaaacaatatgatggaaagattgcagatgtttggt
cttgtggagtcaccttatatgtgatgatagttggagcatatccctttgaa
gatcctgaagaccctagaaactttagaaaaacaattgggcggattcttag
tgtgcagtacgcagttccagattatgtccgaatttcaattgaatgtagac
atctcgtatctcgtatcttcgttgaaaaccccgaaaagagaataaccatc
ccagaaatcaaaaaccacccttggtttctaaagaacttacctgtggaaat
gatggaaggaggaagttggcagtgcaaagacataaattatccgtcacaaa
gccttgaagaagtgatgtatataatacaagaggcaagaaaaccattaagc
gtcccggatgccagcaggcctctcatcggaagcagcagcatggatgttga
tgatcttgaagatgttgaagatattgaaacaagtggtggttttgtgttgc
caaataggagtaattag

Coding sequence (CDS) from alignment at KJ868186:1..1017+

>KJ868186.1-SNRK2.7.m1 ID=KJ868186.1-SNRK2.7.m1; Name=SNRK2.7; organism=Malus prunifolia; type=CDS; length=1017bp; location=Sequence derived from: KJ868186:1..1017+ (Malus prunifolia
atggagaggtatgagattgtgaaagatattgggtctgggaattttggggt
ggcaaggctggcaagagacaagctcaccagagaactctttgctgtcaagt
tcattgagagaggacacaagatagatgaacatgttcaaagggaaatcatg
aaccacagatcactgaagcatccgaatatcgttcgattcaaagaggtcct
gctgacaccaactcatctggccatagtgatggagtacgcggctgggggag
aactcttcgggagaatatgcagtgctggcagatttagtgaggatgaggca
aggtttttcttccagcagttgatatcaggagttaggtactgtcatttgat
gcaaatctgtcatagagaccttaagcttgaaaacacgctcttagacggca
gtccagcaccccgtgtaaaaatatgtgatttcggatactcaaagtcatta
ttgcattctcagcctaaatctactgtaggaacaccggcttatatagcacc
tgaagtcctatctaaaaaacaatatgatggaaagattgcagatgtttggt
cttgtggagtcaccttatatgtgatgatagttggagcatatccctttgaa
gatcctgaagaccctagaaactttagaaaaacaattgggcggattcttag
tgtgcagtacgcagttccagattatgtccgaatttcaattgaatgtagac
atctcgtatctcgtatcttcgttgaaaaccccgaaaagagaataaccatc
ccagaaatcaaaaaccacccttggtttctaaagaacttacctgtggaaat
gatggaaggaggaagttggcagtgcaaagacataaattatccgtcacaaa
gccttgaagaagtgatgtatataatacaagaggcaagaaaaccattaagc
gtcccggatgccagcaggcctctcatcggaagcagcagcatggatgttga
tgatcttgaagatgttgaagatattgaaacaagtggtggttttgtgttgc
caaataggagtaattag