ATPB, JX118082.1-ATPB.m5 (mRNA) Fragaria nipponica

Transcript Overview


Name	ATPB
Unique Name	JX118082.1-ATPB.m5
Type	mRNA
Organism	Fragaria nipponica ()
Source	genbank
Product	ATP synthase CF1 beta subunit

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATPB	JX118082.1-ATPB	Fragaria nipponica	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JX118082.1-ATPB.m5-cds1	JX118082.1-ATPB.m5-cds1	Fragaria nipponica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATPB	JX118082.1-ATPB.p5	Fragaria nipponica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	402238894
nuccore	JX118082.1

Alignments

Feature Name	Type	Location	Analysis
JX118082	region	JX118082:5245..6045-	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JX118082:5245..6045-
coding sequence from alignment at JX118082:5245..6045-

mRNA sequence

>JX118082.1-ATPB.m5 ID=JX118082.1-ATPB.m5; Name=ATPB; organism=Fragaria nipponica; type=mRNA; length=801bp
attgccgaatcaaaagtggctctagtctatggtcagatgaatgaaccgcc
cggagctcgtatgagggttggtttaaccgccctaactatggcggaatatt
tccgagatgttaatgaacaagacgtacttctatttatcgacaatatcttc
cgttttgtccaagcaggatccgaagtatccgctttattgggcagaatgcc
ttccgctgtgggttatcaacccacccttagtaccgaaatgggctctttac
aagaaagaattacttctactaaagaagggtccataacttctattcaagca
gtttatgtacctgcggacgatttgaccgatcctgctccggccacgacatt
tgcacatttagatgctactaccgtactatcaagaggattagctgccaaag
gtatctatccagcagtggatcctttagattcaacatcaactatgctccaa
cctcggattgttggtgaagaacattatgaanctgcgcaaagagttaaaga
aactttacaacgttacaaagaacttcaggacattatagctatccttgggt
tagacgaattatccgaagacgatcgcttaaccgtagcaagagcacgaaaa
attgagcgtttcttatcacaaccctttttcgtagcagaagtatttacagg
ttccccaggaaaatatgttggtctagcagaaacaattagaggttttaaat
tgatcctttctggagaattagatggtcttcctgagcaggccttttattta
gtaggtaacatcgatgaagctactgcgaaagctacgaccttagaaactta
g

protein sequence of ATPB

>JX118082.1-ATPB.p5 ID=JX118082.1-ATPB.p5; Name=ATPB; organism=Fragaria nipponica; type=polypeptide; length=266bp
IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF
RFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQA
VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ
PRIVGEEHYEXAQRVKETLQRYKELQDIIAILGLDELSEDDRLTVARARK
IERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYL
VGNIDEATAKATTLET

mRNA from alignment at JX118082:5245..6045-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JX118082.1-ATPB.m5 ID=JX118082.1-ATPB.m5; Name=ATPB; organism=Fragaria nipponica; type=mRNA; length=801bp; location=Sequence derived from: JX118082:5245..6045- (Fragaria nipponica
ATTGCCGAATCAAAAGTGGCTCTAGTCTATGGTCAGATGAATGAACCGCC
CGGAGCTCGTATGAGGGTTGGTTTAACCGCCCTAACTATGGCGGAATATT
TCCGAGATGTTAATGAACAAGACGTACTTCTATTTATCGACAATATCTTC
CGTTTTGTCCAAGCAGGATCCGAAGTATCCGCTTTATTGGGCAGAATGCC
TTCCGCTGTGGGTTATCAACCCACCCTTAGTACCGAAATGGGCTCTTTAC
AAGAAAGAATTACTTCTACTAAAGAAGGGTCCATAACTTCTATTCAAGCA
GTTTATGTACCTGCGGACGATTTGACCGATCCTGCTCCGGCCACGACATT
TGCACATTTAGATGCTACTACCGTACTATCAAGAGGATTAGCTGCCAAAG
GTATCTATCCAGCAGTGGATCCTTTAGATTCAACATCAACTATGCTCCAA
CCTCGGATTGTTGGTGAAGAACATTATGAANCTGCGCAAAGAGTTAAAGA
AACTTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGT
TAGACGAATTATCCGAAGACGATCGCTTAACCGTAGCAAGAGCACGAAAA
ATTGAGCGTTTCTTATCACAACCCTTTTTCGTAGCAGAAGTATTTACAGG
TTCCCCAGGAAAATATGTTGGTCTAGCAGAAACAATTAGAGGTTTTAAAT
TGATCCTTTCTGGAGAATTAGATGGTCTTCCTGAGCAGGCCTTTTATTTA
GTAGGTAACATCGATGAAGCTACTGCGAAAGCTACGACCTTAGAAACTTA
G

Coding sequence (CDS) from alignment at JX118082:5245..6045-

>JX118082.1-ATPB.m5 ID=JX118082.1-ATPB.m5; Name=ATPB; organism=Fragaria nipponica; type=CDS; length=801bp; location=Sequence derived from: JX118082:5245..6045- (Fragaria nipponica
ATTGCCGAATCAAAAGTGGCTCTAGTCTATGGTCAGATGAATGAACCGCC
CGGAGCTCGTATGAGGGTTGGTTTAACCGCCCTAACTATGGCGGAATATT
TCCGAGATGTTAATGAACAAGACGTACTTCTATTTATCGACAATATCTTC
CGTTTTGTCCAAGCAGGATCCGAAGTATCCGCTTTATTGGGCAGAATGCC
TTCCGCTGTGGGTTATCAACCCACCCTTAGTACCGAAATGGGCTCTTTAC
AAGAAAGAATTACTTCTACTAAAGAAGGGTCCATAACTTCTATTCAAGCA
GTTTATGTACCTGCGGACGATTTGACCGATCCTGCTCCGGCCACGACATT
TGCACATTTAGATGCTACTACCGTACTATCAAGAGGATTAGCTGCCAAAG
GTATCTATCCAGCAGTGGATCCTTTAGATTCAACATCAACTATGCTCCAA
CCTCGGATTGTTGGTGAAGAACATTATGAANCTGCGCAAAGAGTTAAAGA
AACTTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGT
TAGACGAATTATCCGAAGACGATCGCTTAACCGTAGCAAGAGCACGAAAA
ATTGAGCGTTTCTTATCACAACCCTTTTTCGTAGCAGAAGTATTTACAGG
TTCCCCAGGAAAATATGTTGGTCTAGCAGAAACAATTAGAGGTTTTAAAT
TGATCCTTTCTGGAGAATTAGATGGTCTTCCTGAGCAGGCCTTTTATTTA
GTAGGTAACATCGATGAAGCTACTGCGAAAGCTACGACCTTAGAAACTTA
G