RPOC1, JX118030.1-RPOC1.m1 (mRNA) Fragaria orientalis

Transcript Overview
NameRPOC1
Unique NameJX118030.1-RPOC1.m1
TypemRNA
OrganismFragaria orientalis ()
Sourcegenbank
ProductRNA polymerase beta subunit
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
JX118030regionJX118030:1..460 -NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPOC1JX118030.1-RPOC1Fragaria orientalisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JX118030.1-RPOC1.m1-cds1JX118030.1-RPOC1.m1-cds1Fragaria orientalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
RPOC1JX118030.1-RPOC1.p1Fragaria orientalispolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI402238764
nuccoreJX118030.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>JX118030.1-RPOC1.m1 ID=JX118030.1-RPOC1.m1; Name=RPOC1; organism=Fragaria orientalis; type=mRNA; length=460bp
agaattagtcatgtgtcaggagaaattggtacaagaagctgtggatacgc
ttcttgataatggaatccgtggacaaccaatgagggacggtcataataag
gtttacaagtcgttttcagatgtaattgaaggaaaagagggaagattccg
tgagactctgcttggcaaacgggtcgattattcggggcgttctgtcattg
ttgtaggcccttcactttcattacatcgatgtggattgcctcgcgaaata
gcaatagagcttttccagacatttgtaattcgtggtttaattaggcagca
ttttgcctcgaatataggagtggctaagagtaaaattcgggaaaaagagc
cggttgtatgggaaatacttcaggaagttatgcaagggcatcccgtattg
ctgaatagggcgcctactctgcatagattaggcatacaggcgttccagcc
cattttagta
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protein sequence of RPOC1

>JX118030.1-RPOC1.p1 ID=JX118030.1-RPOC1.p1; Name=RPOC1; organism=Fragaria orientalis; type=polypeptide; length=153bp
ELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFR
ETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQH
FASNIGVAKSKIREKEPVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP
ILV
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mRNA from alignment at JX118030:1..460-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JX118030.1-RPOC1.m1 ID=JX118030.1-RPOC1.m1; Name=RPOC1; organism=Fragaria orientalis; type=mRNA; length=460bp; location=Sequence derived from: JX118030:1..460- (Fragaria orientalis
AGAATTAGTCATGTGTCAGGAGAAATTGGTACAAGAAGCTGTGGATACGC
TTCTTGATAATGGAATCCGTGGACAACCAATGAGGGACGGTCATAATAAG
GTTTACAAGTCGTTTTCAGATGTAATTGAAGGAAAAGAGGGAAGATTCCG
TGAGACTCTGCTTGGCAAACGGGTCGATTATTCGGGGCGTTCTGTCATTG
TTGTAGGCCCTTCACTTTCATTACATCGATGTGGATTGCCTCGCGAAATA
GCAATAGAGCTTTTCCAGACATTTGTAATTCGTGGTTTAATTAGGCAGCA
TTTTGCCTCGAATATAGGAGTGGCTAAGAGTAAAATTCGGGAAAAAGAGC
CGGTTGTATGGGAAATACTTCAGGAAGTTATGCAAGGGCATCCCGTATTG
CTGAATAGGGCGCCTACTCTGCATAGATTAGGCATACAGGCGTTCCAGCC
CATTTTAGTA
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Coding sequence (CDS) from alignment at JX118030:1..460-

>JX118030.1-RPOC1.m1 ID=JX118030.1-RPOC1.m1; Name=RPOC1; organism=Fragaria orientalis; type=CDS; length=460bp; location=Sequence derived from: JX118030:1..460- (Fragaria orientalis
AGAATTAGTCATGTGTCAGGAGAAATTGGTACAAGAAGCTGTGGATACGC
TTCTTGATAATGGAATCCGTGGACAACCAATGAGGGACGGTCATAATAAG
GTTTACAAGTCGTTTTCAGATGTAATTGAAGGAAAAGAGGGAAGATTCCG
TGAGACTCTGCTTGGCAAACGGGTCGATTATTCGGGGCGTTCTGTCATTG
TTGTAGGCCCTTCACTTTCATTACATCGATGTGGATTGCCTCGCGAAATA
GCAATAGAGCTTTTCCAGACATTTGTAATTCGTGGTTTAATTAGGCAGCA
TTTTGCCTCGAATATAGGAGTGGCTAAGAGTAAAATTCGGGAAAAAGAGC
CGGTTGTATGGGAAATACTTCAGGAAGTTATGCAAGGGCATCCCGTATTG
CTGAATAGGGCGCCTACTCTGCATAGATTAGGCATACAGGCGTTCCAGCC
CATTTTAGTA
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