MYB40, HM122629.1-MYB40.m1 (mRNA) Malus x domestica

Transcript Overview
NameMYB40
Unique NameHM122629.1-MYB40.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductMYB domain class transcription factor
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HM122629regionHM122629:207..1451 +NCBI Rosaceae gene and mRNA sequencesn/a
Chr04chromosomeChr04:27600500..27602047 -Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotationn/a
chr4chromosomeMYB40:1..1245 .
chr4:18377791..18379338 +		n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HM122629.1-MYB40.m1-cds1HM122629.1-MYB40.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MYB40HM122629.1-MYB40.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI302398947
nuccoreHM122629.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>HM122629.1-MYB40.m1 ID=HM122629.1-MYB40.m1; Name=MYB40; organism=Malus x domestica; type=mRNA; length=1245bp
atggggaggcactcttgttgctacaagcagaagctaaggaaaggcctctg
gtctcctgaagaggatgagaagcttctcaattacatcaccaagcatggcc
atggctgctggagctcagtccctaaactagcaggtctgcagaggtgtggg
aagagctgcaggttaaggtggataaattacctgaggcccgatttgaagag
agggccattctcacagcaagaagagaatttgataatagaactccatgcag
ttcttggcaacagatggtctcagattgcagcccagttaccaggaagaaca
gacaatgagattaaaaatctatggaattcctgcattaagaagaagctgag
gctaagaggcattgaccccaacactcacaaaccactctcagaagtgcttg
atcaaaatattggcaaagaaattaacaacaacaataatattaagctctcc
ccaacttacaaaagcaatgagaaggcctctgtgggatccaatgagctgag
cctggttgaggcagtgagttcaaggcaccctacttcagcgtccaaaaacc
ggttcaacccggtcgaagtttcttccacctccaaactcataagcagcaat
ggcggcagcagcaaaagtttgacacatgaaggctcccccagtagttgcag
gccttgtgattttgtgggatacttttcttttcctcatcacaataaccaaa
gcaattatggttcgtcgtcggatatggggctccaggcagtaaatcaaaac
agcactttcagcttcctcaatcaaaatccagagttcctgcagccgtccat
gtcatcaagctccgccatattcaccgcccctcctcctcctcccacacgtg
tgaagccttccatcagcctcccatccgataactcctccacctgggactcc
aatgccaacaacagcaacagcagcggcggcggctacttcgacagctctgc
agccttttcttggtggccgccggaggcggtaaaatcggacgacccagaag
agatcaaatggtctgaatatctccacaatacctcatttctgatgggaacc
caccaagcctctcagcctgctacttactcagaaatcaaaccagaatctca
gtcacacattttatcaaacagcttgagtgcaacatcttggcaccaccaga
accaccagcagcagcagcagcaagctttacaagcttcagagatgtacaca
aaggatcttcagagacttgctgtatcttttggtcaaaccctttag
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protein sequence of MYB40

>HM122629.1-MYB40.p1 ID=HM122629.1-MYB40.p1; Name=MYB40; organism=Malus x domestica; type=polypeptide; length=414bp
MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCG
KSCRLRWINYLRPDLKRGPFSQQEENLIIELHAVLGNRWSQIAAQLPGRT
DNEIKNLWNSCIKKKLRLRGIDPNTHKPLSEVLDQNIGKEINNNNNIKLS
PTYKSNEKASVGSNELSLVEAVSSRHPTSASKNRFNPVEVSSTSKLISSN
GGSSKSLTHEGSPSSCRPCDFVGYFSFPHHNNQSNYGSSSDMGLQAVNQN
STFSFLNQNPEFLQPSMSSSSAIFTAPPPPPTRVKPSISLPSDNSSTWDS
NANNSNSSGGGYFDSSAAFSWWPPEAVKSDDPEEIKWSEYLHNTSFLMGT
HQASQPATYSEIKPESQSHILSNSLSATSWHHQNHQQQQQQALQASEMYT
KDLQRLAVSFGQTL
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mRNA from alignment at HM122629:207..1451+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HM122629.1-MYB40.m1 ID=HM122629.1-MYB40.m1; Name=MYB40; organism=Malus x domestica; type=mRNA; length=1245bp; location=Sequence derived from: HM122629:207..1451+ (Malus x domestica
atggggaggcactcttgttgctacaagcagaagctaaggaaaggcctctg
gtctcctgaagaggatgagaagcttctcaattacatcaccaagcatggcc
atggctgctggagctcagtccctaaactagcaggtctgcagaggtgtggg
aagagctgcaggttaaggtggataaattacctgaggcccgatttgaagag
agggccattctcacagcaagaagagaatttgataatagaactccatgcag
ttcttggcaacagatggtctcagattgcagcccagttaccaggaagaaca
gacaatgagattaaaaatctatggaattcctgcattaagaagaagctgag
gctaagaggcattgaccccaacactcacaaaccactctcagaagtgcttg
atcaaaatattggcaaagaaattaacaacaacaataatattaagctctcc
ccaacttacaaaagcaatgagaaggcctctgtgggatccaatgagctgag
cctggttgaggcagtgagttcaaggcaccctacttcagcgtccaaaaacc
ggttcaacccggtcgaagtttcttccacctccaaactcataagcagcaat
ggcggcagcagcaaaagtttgacacatgaaggctcccccagtagttgcag
gccttgtgattttgtgggatacttttcttttcctcatcacaataaccaaa
gcaattatggttcgtcgtcggatatggggctccaggcagtaaatcaaaac
agcactttcagcttcctcaatcaaaatccagagttcctgcagccgtccat
gtcatcaagctccgccatattcaccgcccctcctcctcctcccacacgtg
tgaagccttccatcagcctcccatccgataactcctccacctgggactcc
aatgccaacaacagcaacagcagcggcggcggctacttcgacagctctgc
agccttttcttggtggccgccggaggcggtaaaatcggacgacccagaag
agatcaaatggtctgaatatctccacaatacctcatttctgatgggaacc
caccaagcctctcagcctgctacttactcagaaatcaaaccagaatctca
gtcacacattttatcaaacagcttgagtgcaacatcttggcaccaccaga
accaccagcagcagcagcagcaagctttacaagcttcagagatgtacaca
aaggatcttcagagacttgctgtatcttttggtcaaaccctttag
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Coding sequence (CDS) from alignment at HM122629:207..1451+

>HM122629.1-MYB40.m1 ID=HM122629.1-MYB40.m1; Name=MYB40; organism=Malus x domestica; type=CDS; length=1245bp; location=Sequence derived from: HM122629:207..1451+ (Malus x domestica
atggggaggcactcttgttgctacaagcagaagctaaggaaaggcctctg
gtctcctgaagaggatgagaagcttctcaattacatcaccaagcatggcc
atggctgctggagctcagtccctaaactagcaggtctgcagaggtgtggg
aagagctgcaggttaaggtggataaattacctgaggcccgatttgaagag
agggccattctcacagcaagaagagaatttgataatagaactccatgcag
ttcttggcaacagatggtctcagattgcagcccagttaccaggaagaaca
gacaatgagattaaaaatctatggaattcctgcattaagaagaagctgag
gctaagaggcattgaccccaacactcacaaaccactctcagaagtgcttg
atcaaaatattggcaaagaaattaacaacaacaataatattaagctctcc
ccaacttacaaaagcaatgagaaggcctctgtgggatccaatgagctgag
cctggttgaggcagtgagttcaaggcaccctacttcagcgtccaaaaacc
ggttcaacccggtcgaagtttcttccacctccaaactcataagcagcaat
ggcggcagcagcaaaagtttgacacatgaaggctcccccagtagttgcag
gccttgtgattttgtgggatacttttcttttcctcatcacaataaccaaa
gcaattatggttcgtcgtcggatatggggctccaggcagtaaatcaaaac
agcactttcagcttcctcaatcaaaatccagagttcctgcagccgtccat
gtcatcaagctccgccatattcaccgcccctcctcctcctcccacacgtg
tgaagccttccatcagcctcccatccgataactcctccacctgggactcc
aatgccaacaacagcaacagcagcggcggcggctacttcgacagctctgc
agccttttcttggtggccgccggaggcggtaaaatcggacgacccagaag
agatcaaatggtctgaatatctccacaatacctcatttctgatgggaacc
caccaagcctctcagcctgctacttactcagaaatcaaaccagaatctca
gtcacacattttatcaaacagcttgagtgcaacatcttggcaccaccaga
accaccagcagcagcagcagcaagctttacaagcttcagagatgtacaca
aaggatcttcagagacttgctgtatcttttggtcaaaccctttag
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