SDH1, AF323504.1-SDH1.m1 (mRNA) Malus x domestica

Transcript Overview
NameSDH1
Unique NameAF323504.1-SDH1.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
Productsorbitol dehydrogenase
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AF323504regionAF323504:75..1190 +NCBI Rosaceae gene and mRNA sequencesn/a
Chr01chromosomeChr01:22284289..22286463 -Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotationn/a
chr1chromosomeSDH1:1..1116 .
chr1:14157026..14159200 -		n/a
chr1chromosomeSDH1:1..1116 .
chr1:18063359..18065533 -		n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AF323504.1-SDH1.m1-cds1AF323504.1-SDH1.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SDH1AF323504.1-SDH1.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI17225194
nuccoreAF323504.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>AF323504.1-SDH1.m1 ID=AF323504.1-SDH1.m1; Name=SDH1; organism=Malus x domestica; type=mRNA; length=1116bp
atgggaaagggaggcatgtctgatggagatcatgctgatcgctgttgtgg
ggaagcaataaatggtgatgttcaacaagagaacatggctgcttggcttc
ttggtgttaaaaacctcaagattcaaccttacaagctccctaatcttgga
ccccatgatgttagagtccggctgaaggctgttggcatatgtggcagtga
tgttcaccacttcaagaacatgaggtgtgtagattttatagttaaagagc
caatggttattgggcatgagtgtgctgggatcatagaggaagttgggagt
gaggtcgaggatttggtgccaggcgatcgtgtggcactagagcctggtat
cagttgcaagcgatgcaacctctgcaaacaaggccggtacaatctatgcc
gcaagatgaagttttttggctcccctccaaataatggttgtctggcaaat
caggttgtccatccaggagatctatgttttaaactgccagacaatgtgag
tttggaggaaggcgcgatgtgtgagcccttaagtgttggtattcatgctt
gtcgccgggcaaatgtctgtcaagaaacaaatgtcttggtcgtgggagca
ggacctataggacttgttacactgctagccgctcgtgcttttggggcgcc
ccgaattgtcattgcggatgtgaatcacgagcgtttgttgattgcaaaga
gtcttggcgcagatgcagtcgttaaggtttcaacaaatattgaggatgta
gctgaagaagtggctaagatacaaaaggttttggaaaatggagtggatgt
aaccttcgactgtgcaggctttaacaaaaccataacaacagctttgagtg
ctactcgtcccggaggcaaagtttgccttgtgggaatgggtcagagagag
atgactctccctctcgctaccagagagattgatgtaattggaattttccg
ataccagaacacatggccgctgtgccttgagtttctgagaagtggtaaga
ttgatgtgaagcccctcataacacatcggtttggattttctcagaaggag
gtggaagaagcctttgaaaccagtgctcgcggaggcaatgccattaaggt
catgtttaacctgtaa
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protein sequence of SDH1

>AF323504.1-SDH1.p1 ID=AF323504.1-SDH1.p1; Name=SDH1; organism=Malus x domestica; type=polypeptide; length=371bp
MGKGGMSDGDHADRCCGEAINGDVQQENMAAWLLGVKNLKIQPYKLPNLG
PHDVRVRLKAVGICGSDVHHFKNMRCVDFIVKEPMVIGHECAGIIEEVGS
EVEDLVPGDRVALEPGISCKRCNLCKQGRYNLCRKMKFFGSPPNNGCLAN
QVVHPGDLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVCQETNVLVVGA
GPIGLVTLLAARAFGAPRIVIADVNHERLLIAKSLGADAVVKVSTNIEDV
AEEVAKIQKVLENGVDVTFDCAGFNKTITTALSATRPGGKVCLVGMGQRE
MTLPLATREIDVIGIFRYQNTWPLCLEFLRSGKIDVKPLITHRFGFSQKE
VEEAFETSARGGNAIKVMFNL
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mRNA from alignment at AF323504:75..1190+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AF323504.1-SDH1.m1 ID=AF323504.1-SDH1.m1; Name=SDH1; organism=Malus x domestica; type=mRNA; length=1116bp; location=Sequence derived from: AF323504:75..1190+ (Malus x domestica
atgggaaagggaggcatgtctgatggagatcatgctgatcgctgttgtgg
ggaagcaataaatggtgatgttcaacaagagaacatggctgcttggcttc
ttggtgttaaaaacctcaagattcaaccttacaagctccctaatcttgga
ccccatgatgttagagtccggctgaaggctgttggcatatgtggcagtga
tgttcaccacttcaagaacatgaggtgtgtagattttatagttaaagagc
caatggttattgggcatgagtgtgctgggatcatagaggaagttgggagt
gaggtcgaggatttggtgccaggcgatcgtgtggcactagagcctggtat
cagttgcaagcgatgcaacctctgcaaacaaggccggtacaatctatgcc
gcaagatgaagttttttggctcccctccaaataatggttgtctggcaaat
caggttgtccatccaggagatctatgttttaaactgccagacaatgtgag
tttggaggaaggcgcgatgtgtgagcccttaagtgttggtattcatgctt
gtcgccgggcaaatgtctgtcaagaaacaaatgtcttggtcgtgggagca
ggacctataggacttgttacactgctagccgctcgtgcttttggggcgcc
ccgaattgtcattgcggatgtgaatcacgagcgtttgttgattgcaaaga
gtcttggcgcagatgcagtcgttaaggtttcaacaaatattgaggatgta
gctgaagaagtggctaagatacaaaaggttttggaaaatggagtggatgt
aaccttcgactgtgcaggctttaacaaaaccataacaacagctttgagtg
ctactcgtcccggaggcaaagtttgccttgtgggaatgggtcagagagag
atgactctccctctcgctaccagagagattgatgtaattggaattttccg
ataccagaacacatggccgctgtgccttgagtttctgagaagtggtaaga
ttgatgtgaagcccctcataacacatcggtttggattttctcagaaggag
gtggaagaagcctttgaaaccagtgctcgcggaggcaatgccattaaggt
catgtttaacctgtaa
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Coding sequence (CDS) from alignment at AF323504:75..1190+

>AF323504.1-SDH1.m1 ID=AF323504.1-SDH1.m1; Name=SDH1; organism=Malus x domestica; type=CDS; length=1116bp; location=Sequence derived from: AF323504:75..1190+ (Malus x domestica
atgggaaagggaggcatgtctgatggagatcatgctgatcgctgttgtgg
ggaagcaataaatggtgatgttcaacaagagaacatggctgcttggcttc
ttggtgttaaaaacctcaagattcaaccttacaagctccctaatcttgga
ccccatgatgttagagtccggctgaaggctgttggcatatgtggcagtga
tgttcaccacttcaagaacatgaggtgtgtagattttatagttaaagagc
caatggttattgggcatgagtgtgctgggatcatagaggaagttgggagt
gaggtcgaggatttggtgccaggcgatcgtgtggcactagagcctggtat
cagttgcaagcgatgcaacctctgcaaacaaggccggtacaatctatgcc
gcaagatgaagttttttggctcccctccaaataatggttgtctggcaaat
caggttgtccatccaggagatctatgttttaaactgccagacaatgtgag
tttggaggaaggcgcgatgtgtgagcccttaagtgttggtattcatgctt
gtcgccgggcaaatgtctgtcaagaaacaaatgtcttggtcgtgggagca
ggacctataggacttgttacactgctagccgctcgtgcttttggggcgcc
ccgaattgtcattgcggatgtgaatcacgagcgtttgttgattgcaaaga
gtcttggcgcagatgcagtcgttaaggtttcaacaaatattgaggatgta
gctgaagaagtggctaagatacaaaaggttttggaaaatggagtggatgt
aaccttcgactgtgcaggctttaacaaaaccataacaacagctttgagtg
ctactcgtcccggaggcaaagtttgccttgtgggaatgggtcagagagag
atgactctccctctcgctaccagagagattgatgtaattggaattttccg
ataccagaacacatggccgctgtgccttgagtttctgagaagtggtaaga
ttgatgtgaagcccctcataacacatcggtttggattttctcagaaggag
gtggaagaagcctttgaaaccagtgctcgcggaggcaatgccattaaggt
catgtttaacctgtaa
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