HSP1, AF161179.1-HSP1.m1 (mRNA) Malus x domestica

Transcript Overview
NameHSP1
Unique NameAF161179.1-HSP1.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
Productlow molecular weight heat shock protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AF161179regionAF161179:64..546 +NCBI Rosaceae gene and mRNA sequencesn/a
Chr11chromosomeChr11:7421465..7421947 -Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotationn/a
Chr11chromosomeChr11:7308309..7308791 -Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotationn/a
chr11chromosomeHSP1:1..483 .
chr11:7367678..7368160 +		n/a
chr11chromosomeHSP1:1..483 .
chr11:7544509..7544991 +		n/a
chr11chromosomeHSP1:1..483 .
chr11:7597407..7597889 +		n/a
unanchoredchromosomeHSP1:1..483 .
unanchored:51647304..51647786 +		n/a
chr11chromosomeHSP1:1..483 .
chr11:7564486..7564971 +		n/a
chr11chromosomeHSP1:1..483 .
chr11:7537520..7538002 -		n/a
chr11chromosomeHSP1:1..483 .
chr11:7520432..7520914 -		n/a
chr11chromosomeHSP1:1..483 .
chr11:7366583..7367065 -		n/a
chr11chromosomeHSP1:1..483 .
chr11:8190669..8191151 -		n/a
chr11chromosomeHSP1:1..483 .
chr11:8137521..8138003 -		n/a
chr11chromosomeHSP1:1..483 .
chr11:8167073..8167558 -		n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AF161179.1-HSP1.m1-cds1AF161179.1-HSP1.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
HSP1AF161179.1-HSP1.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI6969974
nuccoreAF161179.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>AF161179.1-HSP1.m1 ID=AF161179.1-HSP1.m1; Name=HSP1; organism=Malus x domestica; type=mRNA; length=483bp
atgtcgttaattcccaactcccgacgaggaagcagcagcgttttcgaccc
attctccctcaatctgtgggaccctttcaaggatttcccgttcccttcct
cctcatcactctccgcatttcctgaattttctcgggagaattcggctttt
gtgaacactagggtcgactggaaggagacccccgaagcccatgtgttcaa
ggcggacgttccggggctgaaaaaagaggaggtgaaggtggaggtggaag
acgacagggtgcttaagatcagcggagagaggaacgtggaggaggaggat
aaaaacgacaagtggtacagagtggagaggagcagcggcaagttcttgag
gaggtttcagcttccggagaacgcaaaggttgatcagattaaggctgcca
tggagaatggagttctaagtgtcactgttccgaaggcggagttgaagaac
gttgacgtcagagccattgaaatttcgggttga
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protein sequence of HSP1

>AF161179.1-HSP1.p1 ID=AF161179.1-HSP1.p1; Name=HSP1; organism=Malus x domestica; type=polypeptide; length=160bp
MSLIPNSRRGSSSVFDPFSLNLWDPFKDFPFPSSSSLSAFPEFSRENSAF
VNTRVDWKETPEAHVFKADVPGLKKEEVKVEVEDDRVLKISGERNVEEED
KNDKWYRVERSSGKFLRRFQLPENAKVDQIKAAMENGVLSVTVPKAELKN
VDVRAIEISG
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mRNA from alignment at AF161179:64..546+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AF161179.1-HSP1.m1 ID=AF161179.1-HSP1.m1; Name=HSP1; organism=Malus x domestica; type=mRNA; length=483bp; location=Sequence derived from: AF161179:64..546+ (Malus x domestica
atgtcgttaattcccaactcccgacgaggaagcagcagcgttttcgaccc
attctccctcaatctgtgggaccctttcaaggatttcccgttcccttcct
cctcatcactctccgcatttcctgaattttctcgggagaattcggctttt
gtgaacactagggtcgactggaaggagacccccgaagcccatgtgttcaa
ggcggacgttccggggctgaaaaaagaggaggtgaaggtggaggtggaag
acgacagggtgcttaagatcagcggagagaggaacgtggaggaggaggat
aaaaacgacaagtggtacagagtggagaggagcagcggcaagttcttgag
gaggtttcagcttccggagaacgcaaaggttgatcagattaaggctgcca
tggagaatggagttctaagtgtcactgttccgaaggcggagttgaagaac
gttgacgtcagagccattgaaatttcgggttga
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Coding sequence (CDS) from alignment at AF161179:64..546+

>AF161179.1-HSP1.m1 ID=AF161179.1-HSP1.m1; Name=HSP1; organism=Malus x domestica; type=CDS; length=483bp; location=Sequence derived from: AF161179:64..546+ (Malus x domestica
atgtcgttaattcccaactcccgacgaggaagcagcagcgttttcgaccc
attctccctcaatctgtgggaccctttcaaggatttcccgttcccttcct
cctcatcactctccgcatttcctgaattttctcgggagaattcggctttt
gtgaacactagggtcgactggaaggagacccccgaagcccatgtgttcaa
ggcggacgttccggggctgaaaaaagaggaggtgaaggtggaggtggaag
acgacagggtgcttaagatcagcggagagaggaacgtggaggaggaggat
aaaaacgacaagtggtacagagtggagaggagcagcggcaagttcttgag
gaggtttcagcttccggagaacgcaaaggttgatcagattaaggctgcca
tggagaatggagttctaagtgtcactgttccgaaggcggagttgaagaac
gttgacgtcagagccattgaaatttcgggttga
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