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Transcript Overview
Name | CCD4 |
Unique Name | EU334433.1-CCD4.m1 |
Type | mRNA |
Organism | Rosa x damascena () |
Source | genbank |
Product | carotenoid cleavage dioxygenase 4 |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
EU334433.1-CCD4.m1-cds1 | EU334433.1-CCD4.m1-cds1 | Rosa x damascena | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
CCD4 | EU334433.1-CCD4.p1 | Rosa x damascena | polypeptide |
Cross References
External references for this mRNA
Sequences
The
following sequences are available for this feature:
mRNA sequence >EU334433.1-CCD4.m1 ID=EU334433.1-CCD4.m1; Name=CCD4; organism=Rosa x damascena; type=mRNA; length=1767bp atggatgccttgtcttcttctttcctctccacattgcccactcgatcttc aacaacagcagcaccaaaactcaccccaaccaaatccctcaacatctcct ccgttagaattgaagaaagacccacaacccaaacacctccaaaaaccaca acaccacaacccccaccaaaacagactcctcctcctcctcctccatccta ctcctcaccaccacccacaaaacctaatgcaccagcacttcccgctgtga tcttcaacctcttcgacgacttcatcaacaacttcgtcgacccgccggtc cggtcttcagtcgaccccaaacaggccctctccggtaacttcgctcccgt caccgaacttcccccaaccgaatgtcaagtaatcaaaggctcattaccct ccgctctcgacggcgcttacatccgcaatggccccaaccctcagtacctc ccgcgcgggccctaccacctcttcgacggcgacggcatgctccactccat cagaatctcccaaggccgcgccgtcctctgcagccgcttcgtcaagacct acaagtacaccgtcgagcgcgacgccggcttccctctcctccccaacgtc ttctccggcttcaacggcctcaccgcctccgcgacacgtggcgccctctc cgctgcccgcgtggcctcggggctgtacaatcccgccaacggcattggca acgcgaacaccagcttggcgtttttcggcgaccgtctctacgcgctcgcc gagtctgatcttccttacgccgtgcgcttgacggccgacggcgacgtcga gaccgtgggacggaacgactttaacggcgagctgttcattagcatgacgg cgcatccgaagatcgatccagacaccggcgagaccttcgctttccgttac ggcccggtgccgccgtttctcacttacttccggttcgacccgaccggagc gaaacaacccgacgtgccggtgttctccctgaccagtccttctatgctcc acgacttcgcgatcactaaaaagtacgccgtgttcgccgacattcagatc ggaatgaacccgatggagatgatcggcggcggatctccggtggggttgga cgcttctaaagtatctagaataggaataattccgaaatacgcgaaggacg attccgagatgaggtggtttgaggtgcccgggttcaacatcatgcatgcg gttaacgcatgggacgaagacgacgccgttgtgatggtggcgccgaacat cttatcggcggagcacactctcgagagaatggagctcgttcacgcgctcg tggagaaggtgaggatcgatctcaagaccgggatcgtttcgcgccaaccg atctcgacccggaatctggacttcgcggtgataaacccggcttaccaggg gaaaaagaaccggttcgtgtacgcgggcgtcggggatccgatgccgaaga tatcgggagtggtgaagctcgacgtgtcgggtgatgagcacaaggagagc atagtggcgagtaggatgtacggtcagggttgcttcgggggagagccgtt tttcgtggcgagggatccggagaatccggaggcggaggaggacgacgggt acgtggtgtcgtatgttcatgatgagaagacgggagagtcgaggtttttg gtgatggacgccaagtcgtctgagctggaaaccgtggcggaagttaagct gccacggcgggtgccgtacggttttcacggactgtttgtgagggagagtg acctgaagaagttgtag back to topprotein sequence of CCD4 >EU334433.1-CCD4.p1 ID=EU334433.1-CCD4.p1; Name=CCD4; organism=Rosa x damascena; type=polypeptide; length=588bp MDALSSSFLSTLPTRSSTTAAPKLTPTKSLNISSVRIEERPTTQTPPKTT TPQPPPKQTPPPPPPSYSSPPPTKPNAPALPAVIFNLFDDFINNFVDPPV RSSVDPKQALSGNFAPVTELPPTECQVIKGSLPSALDGAYIRNGPNPQYL PRGPYHLFDGDGMLHSIRISQGRAVLCSRFVKTYKYTVERDAGFPLLPNV FSGFNGLTASATRGALSAARVASGLYNPANGIGNANTSLAFFGDRLYALA ESDLPYAVRLTADGDVETVGRNDFNGELFISMTAHPKIDPDTGETFAFRY GPVPPFLTYFRFDPTGAKQPDVPVFSLTSPSMLHDFAITKKYAVFADIQI GMNPMEMIGGGSPVGLDASKVSRIGIIPKYAKDDSEMRWFEVPGFNIMHA VNAWDEDDAVVMVAPNILSAEHTLERMELVHALVEKVRIDLKTGIVSRQP ISTRNLDFAVINPAYQGKKNRFVYAGVGDPMPKISGVVKLDVSGDEHKES IVASRMYGQGCFGGEPFFVARDPENPEAEEDDGYVVSYVHDEKTGESRFL VMDAKSSELETVAEVKLPRRVPYGFHGLFVRESDLKKL back to topmRNA from alignment at EU334433:15..1781+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >EU334433.1-CCD4.m1 ID=EU334433.1-CCD4.m1; Name=CCD4; organism=Rosa x damascena; type=mRNA; length=1767bp; location=Sequence derived from: EU334433:15..1781+ (Rosa x damascena atggatgccttgtcttcttctttcctctccacattgcccactcgatcttc
aacaacagcagcaccaaaactcaccccaaccaaatccctcaacatctcct
ccgttagaattgaagaaagacccacaacccaaacacctccaaaaaccaca
acaccacaacccccaccaaaacagactcctcctcctcctcctccatccta
ctcctcaccaccacccacaaaacctaatgcaccagcacttcccgctgtga
tcttcaacctcttcgacgacttcatcaacaacttcgtcgacccgccggtc
cggtcttcagtcgaccccaaacaggccctctccggtaacttcgctcccgt
caccgaacttcccccaaccgaatgtcaagtaatcaaaggctcattaccct
ccgctctcgacggcgcttacatccgcaatggccccaaccctcagtacctc
ccgcgcgggccctaccacctcttcgacggcgacggcatgctccactccat
cagaatctcccaaggccgcgccgtcctctgcagccgcttcgtcaagacct
acaagtacaccgtcgagcgcgacgccggcttccctctcctccccaacgtc
ttctccggcttcaacggcctcaccgcctccgcgacacgtggcgccctctc
cgctgcccgcgtggcctcggggctgtacaatcccgccaacggcattggca
acgcgaacaccagcttggcgtttttcggcgaccgtctctacgcgctcgcc
gagtctgatcttccttacgccgtgcgcttgacggccgacggcgacgtcga
gaccgtgggacggaacgactttaacggcgagctgttcattagcatgacgg
cgcatccgaagatcgatccagacaccggcgagaccttcgctttccgttac
ggcccggtgccgccgtttctcacttacttccggttcgacccgaccggagc
gaaacaacccgacgtgccggtgttctccctgaccagtccttctatgctcc
acgacttcgcgatcactaaaaagtacgccgtgttcgccgacattcagatc
ggaatgaacccgatggagatgatcggcggcggatctccggtggggttgga
cgcttctaaagtatctagaataggaataattccgaaatacgcgaaggacg
attccgagatgaggtggtttgaggtgcccgggttcaacatcatgcatgcg
gttaacgcatgggacgaagacgacgccgttgtgatggtggcgccgaacat
cttatcggcggagcacactctcgagagaatggagctcgttcacgcgctcg
tggagaaggtgaggatcgatctcaagaccgggatcgtttcgcgccaaccg
atctcgacccggaatctggacttcgcggtgataaacccggcttaccaggg
gaaaaagaaccggttcgtgtacgcgggcgtcggggatccgatgccgaaga
tatcgggagtggtgaagctcgacgtgtcgggtgatgagcacaaggagagc
atagtggcgagtaggatgtacggtcagggttgcttcgggggagagccgtt
tttcgtggcgagggatccggagaatccggaggcggaggaggacgacgggt
acgtggtgtcgtatgttcatgatgagaagacgggagagtcgaggtttttg
gtgatggacgccaagtcgtctgagctggaaaccgtggcggaagttaagct
gccacggcgggtgccgtacggttttcacggactgtttgtgagggagagtg
acctgaagaagttgtag back to topCoding sequence (CDS) from alignment at EU334433:15..1781+ >EU334433.1-CCD4.m1 ID=EU334433.1-CCD4.m1; Name=CCD4; organism=Rosa x damascena; type=CDS; length=1767bp; location=Sequence derived from: EU334433:15..1781+ (Rosa x damascena atggatgccttgtcttcttctttcctctccacattgcccactcgatcttc aacaacagcagcaccaaaactcaccccaaccaaatccctcaacatctcct ccgttagaattgaagaaagacccacaacccaaacacctccaaaaaccaca acaccacaacccccaccaaaacagactcctcctcctcctcctccatccta ctcctcaccaccacccacaaaacctaatgcaccagcacttcccgctgtga tcttcaacctcttcgacgacttcatcaacaacttcgtcgacccgccggtc cggtcttcagtcgaccccaaacaggccctctccggtaacttcgctcccgt caccgaacttcccccaaccgaatgtcaagtaatcaaaggctcattaccct ccgctctcgacggcgcttacatccgcaatggccccaaccctcagtacctc ccgcgcgggccctaccacctcttcgacggcgacggcatgctccactccat cagaatctcccaaggccgcgccgtcctctgcagccgcttcgtcaagacct acaagtacaccgtcgagcgcgacgccggcttccctctcctccccaacgtc ttctccggcttcaacggcctcaccgcctccgcgacacgtggcgccctctc cgctgcccgcgtggcctcggggctgtacaatcccgccaacggcattggca acgcgaacaccagcttggcgtttttcggcgaccgtctctacgcgctcgcc gagtctgatcttccttacgccgtgcgcttgacggccgacggcgacgtcga gaccgtgggacggaacgactttaacggcgagctgttcattagcatgacgg cgcatccgaagatcgatccagacaccggcgagaccttcgctttccgttac ggcccggtgccgccgtttctcacttacttccggttcgacccgaccggagc gaaacaacccgacgtgccggtgttctccctgaccagtccttctatgctcc acgacttcgcgatcactaaaaagtacgccgtgttcgccgacattcagatc ggaatgaacccgatggagatgatcggcggcggatctccggtggggttgga cgcttctaaagtatctagaataggaataattccgaaatacgcgaaggacg attccgagatgaggtggtttgaggtgcccgggttcaacatcatgcatgcg gttaacgcatgggacgaagacgacgccgttgtgatggtggcgccgaacat cttatcggcggagcacactctcgagagaatggagctcgttcacgcgctcg tggagaaggtgaggatcgatctcaagaccgggatcgtttcgcgccaaccg atctcgacccggaatctggacttcgcggtgataaacccggcttaccaggg gaaaaagaaccggttcgtgtacgcgggcgtcggggatccgatgccgaaga tatcgggagtggtgaagctcgacgtgtcgggtgatgagcacaaggagagc atagtggcgagtaggatgtacggtcagggttgcttcgggggagagccgtt tttcgtggcgagggatccggagaatccggaggcggaggaggacgacgggt acgtggtgtcgtatgttcatgatgagaagacgggagagtcgaggtttttg gtgatggacgccaagtcgtctgagctggaaaccgtggcggaagttaagct gccacggcgggtgccgtacggttttcacggactgtttgtgagggagagtg acctgaagaagttgtag back to top
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