|
|
Transcript Overview
| Name | HNL5 |
|---|
| Unique Name | AY321296.1-HNL5.m1 |
|---|
| Type | mRNA |
|---|
| Organism | Prunus dulcis (Almond) |
|---|
| Source | genbank |
|---|
| Product | hnl isoenzyme 5 |
|---|
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| AY321296.1-HNL5.m1-cds1 | AY321296.1-HNL5.m1-cds1 | Prunus dulcis | CDS |
| AY321296.1-HNL5.m1-cds2 | AY321296.1-HNL5.m1-cds2 | Prunus dulcis | CDS |
| AY321296.1-HNL5.m1-cds3 | AY321296.1-HNL5.m1-cds3 | Prunus dulcis | CDS |
| AY321296.1-HNL5.m1-cds4 | AY321296.1-HNL5.m1-cds4 | Prunus dulcis | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| HNL5 | AY321296.1-HNL5.p1 | Prunus dulcis | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| AY321296 |
region |
AY321296:6..2146+ |
NCBI Rosaceae gene and mRNA sequences |
| scaffold_1 |
supercontig |
scaffold_1:6606837..6608976+ |
Prunus persica Whole Genome v1.0 Assembly & Annotation |
| scaffold_1 |
supercontig |
scaffold_1:6631068..6633424- |
Prunus persica Whole Genome v1.0 Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >AY321296.1-HNL5.m1 ID=AY321296.1-HNL5.m1; Name=HNL5; organism=Prunus dulcis; type=mRNA; length=1680bp
atggagaaatcaacaatgtcagttatactatttgtgttgcatcttcttgt
tcttcatcttcagtattcagaggttcactcgcttgccaatacttctgctc
atgattttagctacttgaagtttgtgtacaacgccactgatacaagctcg
gaaggatcatatgactacattgtaatcggtggaggaacatcagggtgtcc
attggcagcaactttatcagaaaaatacaaggtgcttcttctagaaagag
gcactattgctacagaatacccgaacacgttgactgcagatgggtttgca
tataatctgcagcaacaagatgatggaaagacgccagttgaaaggttcgt
gtccgaagatggcattgataatgtgcgagccaggatcctcggtggcacga
ccataatcaatgcaggcgtctacgccagagctaacatttcattctatagt
caaacaggaattgaatgggacctggatttggtcaataagacatatgagtg
ggttgaagacgccattgtggtcaagccaaataatcaatcttggcaatctg
ttataggagagggattcttggaggcgggtattcttccagacaatggattt
agtttggatcacgaagcaggaactagactcaccggctcaacttttgacaa
taatggaacgcgacatgcggctgatgaactgcttaataaaggagacccta
ataacttgctagttgcagttcaggcctcagtagagaagatcctcttctct
tccaatacatcaaatttgtcagctattggagtcatatatacggattctga
tggaaactctcatcaggcatttgtacgcggtaacggagaagttattgtta
gtgcagggacaatcggaacgcctcagcttctactacttagtggcgttgga
ccagagtcttacctatcttctctcaacatcacagttgttcagccgaatcc
ttatgttgggcagtttgtgtatgacaatcctcgtaatttcattaatattt
tgcccccaaatccaattgaagcctctgttgtaactgttttaggcattaga
agtgattattatcaagtttctctgtcaagcttgccattttccactccacc
ctttagtctttttcctacaacatcttaccccctcccaaattcgacttttg
ctcatattgntagccaagttccaggaccattgtctcatggttctgtcacg
ctaaattcatcatctgacgtgagaatcgctccaaatattaaattcaatta
ctattcaaattccacagaccttgctaattgtgtnagcggcatgaagaagc
ttggtgacttattaaggacaaaggcattagaaccatataaagctcgagat
gtgctgggaattgacggtttcaattatttgggagtacctttgccagagaa
ccaaacagatgatgcatccttcgaaacattttgtctagataatgtagctt
catactggcattaccacggtggaagccttgttgggaaagtgcttgatgac
agtttccgtgttatggggatcaaagcattacgcgttgttgatgcctccac
tttcccttacgaaccaancagccatcctcagggcttctatctgatgttag
gaaggtatgtgggccttcaaatcctgcaagaaaggtcaatccggttggag
gctattcataatattcaagagtccatgtga back to topprotein sequence of HNL5 >AY321296.1-HNL5.p1 ID=AY321296.1-HNL5.p1; Name=HNL5; organism=Prunus dulcis; type=polypeptide; length=559bp
MEKSTMSVILFVLHLLVLHLQYSEVHSLANTSAHDFSYLKFVYNATDTSS
EGSYDYIVIGGGTSGCPLAATLSEKYKVLLLERGTIATEYPNTLTADGFA
YNLQQQDDGKTPVERFVSEDGIDNVRARILGGTTIINAGVYARANISFYS
QTGIEWDLDLVNKTYEWVEDAIVVKPNNQSWQSVIGEGFLEAGILPDNGF
SLDHEAGTRLTGSTFDNNGTRHAADELLNKGDPNNLLVAVQASVEKILFS
SNTSNLSAIGVIYTDSDGNSHQAFVRGNGEVIVSAGTIGTPQLLLLSGVG
PESYLSSLNITVVQPNPYVGQFVYDNPRNFINILPPNPIEASVVTVLGIR
SDYYQVSLSSLPFSTPPFSLFPTTSYPLPNSTFAHIXSQVPGPLSHGSVT
LNSSSDVRIAPNIKFNYYSNSTDLANCVSGMKKLGDLLRTKALEPYKARD
VLGIDGFNYLGVPLPENQTDDASFETFCLDNVASYWHYHGGSLVGKVLDD
SFRVMGIKALRVVDASTFPYEPXSHPQGFYLMLGRYVGLQILQERSIRLE
AIHNIQESM back to topmRNA from alignment at AY321296:6..2146+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >AY321296.1-HNL5.m1 ID=AY321296.1-HNL5.m1; Name=HNL5; organism=Prunus dulcis; type=mRNA; length=2141bp; location=Sequence derived from: AY321296:6..2146+ (Prunus dulcis
atggagaaatcaacaatgtcagttatactatttgtgttgcatcttcttgt
tcttcatcttcagtattcagaggttcactcgcttgccaatacttctgctc
atggtaaatttccatcttcagtattcatttaacagcaaaatgtgtagatt
tataattaagaaaactgacacaagtagtgcaagaaacaagctaatttaga
tgcatgttgaaaaaaatctttcatctcttcacatatattttgcagatttt
agctacttgaagtttgtgtacaacgccactgatacaagctcggaaggatc
atatgactacattgtaatcggtggaggaacatcagggtgtccattggcag
caactttatcagaaaaatacaaggtgcttcttctagaaagaggcactatt
gctacagaatacccgaacacgttgactgcagatgggtttgcatataatct
gcagcaacaagatgatggaaagacgccagttgaaaggttcgtgtccgaag
atggcattgataatgtgcgagccaggatcctcggtggcacgaccataatc
aatgcaggcgtctacgccagagctaacatttcattctatagtcaaacagg
aattgaatgggacctggatttggtcaataagacatatgagtgggttgaag
acgccattgtggtcaagccaaataatcaatcttggcaatctgttatagga
gagggattcttggaggcgggtattcttccagacaatggatttagtttgga
tcacgaagcaggaactagactcaccggctcaacttttgacaataatggaa
cgcgacatgcggctgatgaactgcttaataaaggagaccctaataacttg
ctagttgcagttcaggcctcagtagagaagatcctcttctcttccaatac
atcaagtatgttgcatcagtgatatttaatggtagctcctagtttgtcat
gctgcactcgaaaattattattttatcattttaaaatactaacagaatag
tgtgaagtctcatatttcccttccatatttcccaaatttccataaacaaa
acttcccaattctccttcgtttagtttgacaataattataagctattctc
taatgcagatttgtcagctattggagtcatatatacggattctgatggaa
actctcatcaggcatttgtacgcggtaacggagaagttattgttagtgca
gggacaatcggaacgcctcagcttctactacttagtggcgttggaccaga
gtcttacctatcttctctcaacatcacagttgttcagccgaatccttatg
ttgggcagtttgtgtatgacaatcctcgtaatttcattaatattttgccc
ccaaatccaattgaagcctctgttgtaactgttttaggcattagaagtga
ttattatcaagtttctctgtcaagcttgccattttccactccacccttta
gtctttttcctacaacatcttaccccctcccaaattcgacttttgctcat
attgntagccaagttccaggaccattgtctcatggttctgtcacgctaaa
ttcatcatctgacgtgagaatcgctccaaatattaaattcaattactatt
caaattccacagaccttgctaattgtgtnagcggcatgaagaagcttggt
gacttattaaggacaaaggcattagaaccatataaagctcgagatgtgct
gggaattgacggtttcaattatttgggagtacctttgccagagaaccaaa
cagatgatgcatccttcgaaacattttgtctagataatgtagcttcatac
tggcattaccacggtggaagccttgttgggaaagtgcttgatgacagttt
ccgtgttatggggatcaaagcattacgcgttgttgatgcctccactttcc
cttacgaaccaancagccatcctcagggcttctatctgatgttaggaagg
tatgtgatgcacacttccaaccactagagattctcaatattttgttgttg
ttgtaatgaactctctgccgcattgctcttttttattaatccttaaaatt
ttgtgttttgcgcaggtatgtgggccttcaaatcctgcaagaaaggtcaa
tccggttggaggctattcataatattcaagagtccatgtga back to topCoding sequence (CDS) from alignment at AY321296:6..2146+ >AY321296.1-HNL5.m1 ID=AY321296.1-HNL5.m1; Name=HNL5; organism=Prunus dulcis; type=CDS; length=1680bp; location=Sequence derived from: AY321296:6..2146+ (Prunus dulcis
atggagaaatcaacaatgtcagttatactatttgtgttgcatcttcttgt
tcttcatcttcagtattcagaggttcactcgcttgccaatacttctgctc
atgattttagctacttgaagtttgtgtacaacgccactgatacaagctcg
gaaggatcatatgactacattgtaatcggtggaggaacatcagggtgtcc
attggcagcaactttatcagaaaaatacaaggtgcttcttctagaaagag
gcactattgctacagaatacccgaacacgttgactgcagatgggtttgca
tataatctgcagcaacaagatgatggaaagacgccagttgaaaggttcgt
gtccgaagatggcattgataatgtgcgagccaggatcctcggtggcacga
ccataatcaatgcaggcgtctacgccagagctaacatttcattctatagt
caaacaggaattgaatgggacctggatttggtcaataagacatatgagtg
ggttgaagacgccattgtggtcaagccaaataatcaatcttggcaatctg
ttataggagagggattcttggaggcgggtattcttccagacaatggattt
agtttggatcacgaagcaggaactagactcaccggctcaacttttgacaa
taatggaacgcgacatgcggctgatgaactgcttaataaaggagacccta
ataacttgctagttgcagttcaggcctcagtagagaagatcctcttctct
tccaatacatcaaatttgtcagctattggagtcatatatacggattctga
tggaaactctcatcaggcatttgtacgcggtaacggagaagttattgtta
gtgcagggacaatcggaacgcctcagcttctactacttagtggcgttgga
ccagagtcttacctatcttctctcaacatcacagttgttcagccgaatcc
ttatgttgggcagtttgtgtatgacaatcctcgtaatttcattaatattt
tgcccccaaatccaattgaagcctctgttgtaactgttttaggcattaga
agtgattattatcaagtttctctgtcaagcttgccattttccactccacc
ctttagtctttttcctacaacatcttaccccctcccaaattcgacttttg
ctcatattgntagccaagttccaggaccattgtctcatggttctgtcacg
ctaaattcatcatctgacgtgagaatcgctccaaatattaaattcaatta
ctattcaaattccacagaccttgctaattgtgtnagcggcatgaagaagc
ttggtgacttattaaggacaaaggcattagaaccatataaagctcgagat
gtgctgggaattgacggtttcaattatttgggagtacctttgccagagaa
ccaaacagatgatgcatccttcgaaacattttgtctagataatgtagctt
catactggcattaccacggtggaagccttgttgggaaagtgcttgatgac
agtttccgtgttatggggatcaaagcattacgcgttgttgatgcctccac
tttcccttacgaaccaancagccatcctcagggcttctatctgatgttag
gaaggtatgtgggccttcaaatcctgcaagaaaggtcaatccggttggag
gctattcataatattcaagagtccatgtga back to top
|
