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Transcript Overview
Name | EXP3 |
Unique Name | AB093030.1-EXP3.m1 |
Type | mRNA |
Organism | Pyrus communis (European Pear) |
Source | genbank |
Product | expansin |
Alignments
The following features are aligned
Feature Name | Type | Location | Analysis | Reference |
AB093030 | region | AB093030:74..838 + | NCBI Rosaceae gene and mRNA sequences | n/a |
scaffold01102 | supercontig | EXP3:1..765 . scaffold01102:14427..15808 + | | n/a |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
AB093030.1-EXP3.m1-cds1 | AB093030.1-EXP3.m1-cds1 | Pyrus communis | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
EXP3 | AB093030.1-EXP3.p1 | Pyrus communis | polypeptide |
Cross References
External references for this mRNA
Sequences
The
following sequences are available for this feature:
mRNA sequence >AB093030.1-EXP3.m1 ID=AB093030.1-EXP3.m1; Name=EXP3; organism=Pyrus communis; type=mRNA; length=765bp atggcagctcatgcattgtcttttgctcctatagccctctctgttgttct ctttaatctacatctgcatggtgtatttgctgtttatggtagctgggaag gcgctcatgccacattttacggtggcggtgatgcttctggcacaatggga ggagcatgtggttatgggaatttgtacagccaggggtatggaaccaacac tgcagctttgagcacagcattgttcaacaatggcttaagctgtgggtctt gttatgaaatgagatgcgacaatgacccgagatggtgccgtcctggatcc atcattgtaactgctacaaacttttgccctcctaactttgctcagtccaa cgacaatggcggatggtgcaatcctcctctccagcatttcgatttggctg agcctgctttcttgcaaattgcccaataccgtgctggaatcgtgccggtt tccttcagaagagtaccttgtgtgaagaaaggaggaataagattcaccat caacggccactcctacttcaacctggttttgatcaccaacgtggctgggg caggagacgtccattcagtttcaatcaaggggtccagaacagggtggcaa cccatgtcaagaaactggggtcaaaactggcagagcaactcttacctcaa tggccaagccctctccttccaagtcaccaccagtgacggtagaaccgtca cgagctacaacgtcgcgcctggtaattggcagtttggtcagacattctcc gggggtcaattttag back to topprotein sequence of EXP3 >AB093030.1-EXP3.p1 ID=AB093030.1-EXP3.p1; Name=EXP3; organism=Pyrus communis; type=polypeptide; length=254bp MAAHALSFAPIALSVVLFNLHLHGVFAVYGSWEGAHATFYGGGDASGTMG GACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCDNDPRWCRPGS IIVTATNFCPPNFAQSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPV SFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHSVSIKGSRTGWQ PMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTVTSYNVAPGNWQFGQTFS GGQF back to topmRNA from alignment at AB093030:74..838+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >AB093030.1-EXP3.m1 ID=AB093030.1-EXP3.m1; Name=EXP3; organism=Pyrus communis; type=mRNA; length=765bp; location=Sequence derived from: AB093030:74..838+ (Pyrus communis atggcagctcatgcattgtcttttgctcctatagccctctctgttgttct
ctttaatctacatctgcatggtgtatttgctgtttatggtagctgggaag
gcgctcatgccacattttacggtggcggtgatgcttctggcacaatggga
ggagcatgtggttatgggaatttgtacagccaggggtatggaaccaacac
tgcagctttgagcacagcattgttcaacaatggcttaagctgtgggtctt
gttatgaaatgagatgcgacaatgacccgagatggtgccgtcctggatcc
atcattgtaactgctacaaacttttgccctcctaactttgctcagtccaa
cgacaatggcggatggtgcaatcctcctctccagcatttcgatttggctg
agcctgctttcttgcaaattgcccaataccgtgctggaatcgtgccggtt
tccttcagaagagtaccttgtgtgaagaaaggaggaataagattcaccat
caacggccactcctacttcaacctggttttgatcaccaacgtggctgggg
caggagacgtccattcagtttcaatcaaggggtccagaacagggtggcaa
cccatgtcaagaaactggggtcaaaactggcagagcaactcttacctcaa
tggccaagccctctccttccaagtcaccaccagtgacggtagaaccgtca
cgagctacaacgtcgcgcctggtaattggcagtttggtcagacattctcc
gggggtcaattttag back to topCoding sequence (CDS) from alignment at AB093030:74..838+ >AB093030.1-EXP3.m1 ID=AB093030.1-EXP3.m1; Name=EXP3; organism=Pyrus communis; type=CDS; length=765bp; location=Sequence derived from: AB093030:74..838+ (Pyrus communis atggcagctcatgcattgtcttttgctcctatagccctctctgttgttct ctttaatctacatctgcatggtgtatttgctgtttatggtagctgggaag gcgctcatgccacattttacggtggcggtgatgcttctggcacaatggga ggagcatgtggttatgggaatttgtacagccaggggtatggaaccaacac tgcagctttgagcacagcattgttcaacaatggcttaagctgtgggtctt gttatgaaatgagatgcgacaatgacccgagatggtgccgtcctggatcc atcattgtaactgctacaaacttttgccctcctaactttgctcagtccaa cgacaatggcggatggtgcaatcctcctctccagcatttcgatttggctg agcctgctttcttgcaaattgcccaataccgtgctggaatcgtgccggtt tccttcagaagagtaccttgtgtgaagaaaggaggaataagattcaccat caacggccactcctacttcaacctggttttgatcaccaacgtggctgggg caggagacgtccattcagtttcaatcaaggggtccagaacagggtggcaa cccatgtcaagaaactggggtcaaaactggcagagcaactcttacctcaa tggccaagccctctccttccaagtcaccaccagtgacggtagaaccgtca cgagctacaacgtcgcgcctggtaattggcagtttggtcagacattctcc gggggtcaattttag back to top
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