Apple_HCGA_F1

Map Overview

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NameApple_HCGA_F1
SpeciesMalus x domestica
SoftwareJoinmap4.1
Population typeF1
Map typegenetic
Map unitcM
Paternal parentTwin Bee Gala
Population size125
Number of loci1042
Number of linkage groups17
Publication[view all]
ContactJames Luby
Stock
NameTypeDetails
Honeycrisp_x_Twin Bee Gala-F1population
Origin detail:University of Minnesota
Population size:125
Contact
NameDetails
James Luby
First name:James
Last name:Luby
Institution:Department of Horticultural Science, University of Minnesota, St. Paul, MN
Address:St Paul, MN 55104
Country:United States
Email:lubyx001@umn.edu
Map Loci
This map contains 1,042 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_46723348_Lg15_01752_MAF10_MDP0000578301_exon1SNP_CT_46723348_Lg15_01752_MAF10_MDP0000578301_exon1marker_locus99.83 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_AC_50088799_Lg15_00079_MAF20_474486_exon1SNP_AC_50088799_Lg15_00079_MAF20_474486_exon1marker_locus99.83 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GA_49250482_Lg15_01707_MAF20_641093_exon1SNP_GA_49250482_Lg15_01707_MAF20_641093_exon1marker_locus99.83 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CA_49272083_Lg15_01707_MAF30_1627019_exon1SNP_CA_49272083_Lg15_01707_MAF30_1627019_exon1marker_locus99.83 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_TC_11157283_Lg9_00947_MAF30_348564_exon2SNP_TC_11157283_Lg9_00947_MAF30_348564_exon2marker_locus0 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_CA_14005346_Lg7_02840_MAF40_MDP0000218961_exon7SNP_CA_14005346_Lg7_02840_MAF40_MDP0000218961_exon7marker_locus3.31 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_AG_13936750_Lg7_02840_MAF50_1645158_exon1SNP_AG_13936750_Lg7_02840_MAF50_1645158_exon1marker_locus3.31 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_GA_6632118_Lg2_00333_MAF40_MDP0000229589_exon1SNP_GA_6632118_Lg2_00333_MAF40_MDP0000229589_exon1marker_locus5.77 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_GA_6755598_Lg2_01549_MAF30_842423_exon1SNP_GA_6755598_Lg2_01549_MAF30_842423_exon1marker_locus6.57 cM
Apple_HCGA_F1.16GDsnp01237GDsnp01237marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_CT_9984447_Lg16_00879_MAF20_1622157_exon2SNP_CT_9984447_Lg16_00879_MAF20_1622157_exon2marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_GA_14049362_Lg10_ERS1_MAF40_MDP0000320544_exon3SNP_GA_14049362_Lg10_ERS1_MAF40_MDP0000320544_exon3marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_GA_23907081_Lg1_RosCOS1602_MAF40_MDP0000265342_exon2SNP_GA_23907081_Lg1_RosCOS1602_MAF40_MDP0000265342_exon2marker_locus8.2 cM
Apple_HCGA_F1.16GDsnp00626GDsnp00626marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_AG_10009408_Lg16_00879_MAF50_487493_exon1SNP_AG_10009408_Lg16_00879_MAF50_487493_exon1marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_TC_14037215_Lg10_ERS1_MAF20_532900_exon1SNP_TC_14037215_Lg10_ERS1_MAF20_532900_exon1marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_TC_9954780_Lg16_00879_MAF20_MDP0000236713_exon4SNP_TC_9954780_Lg16_00879_MAF20_MDP0000236713_exon4marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_TC_9973499_Lg16_00879_MAF40_1665047_exon1SNP_TC_9973499_Lg16_00879_MAF40_1665047_exon1marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_CT_23903552_Lg1_RosCOS1602_MAF20_MDP0000235263_exon4SNP_CT_23903552_Lg1_RosCOS1602_MAF20_MDP0000235263_exon4marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_AG_20224906_Lg16_00626_MAF40_514275_exon1SNP_AG_20224906_Lg16_00626_MAF40_514275_exon1marker_locus8.2 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_TC_23899418_Lg1_RosCOS1602_MAF20_MDP0000283296_exon1SNP_TC_23899418_Lg1_RosCOS1602_MAF20_MDP0000283296_exon1marker_locus8.2 cM
Apple_HCGA_F1.16GDsnp02207GDsnp02207marker_locus9.01 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_TC_12850088_Lg16_02087_MAF40_MDP0000321003_exon4SNP_TC_12850088_Lg16_02087_MAF40_MDP0000321003_exon4marker_locus20.67 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_TC_12334023_Lg16_01244_MAF50_1633206_exon1SNP_TC_12334023_Lg16_01244_MAF50_1633206_exon1marker_locus20.69 cM
Apple_HCGA_F1.16RosBREEDSNP_SNP_CT_12320066_Lg16_01244_MAF30_MDP0000422544_exon6SNP_CT_12320066_Lg16_01244_MAF30_MDP0000422544_exon6marker_locus21.47 cM
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