Apple_HCGA_F1

Map Overview

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NameApple_HCGA_F1
SpeciesMalus x domestica
SoftwareJoinmap4.1
Population typeF1
Map typegenetic
Map unitcM
Paternal parentTwin Bee Gala
Population size125
Number of loci1042
Number of linkage groups17
Publication[view all]
ContactJames Luby
Stock
NameTypeDetails
Honeycrisp_x_Twin Bee Gala-F1population
Origin detail:University of Minnesota
Population size:125
Contact
NameDetails
James Luby
First name:James
Last name:Luby
Institution:Department of Horticultural Science, University of Minnesota, St. Paul, MN
Address:St Paul, MN 55104
Country:United States
Email:lubyx001@umn.edu
Map Loci
This map contains 1,042 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple_HCGA_F1.12RosBREEDSNP_SNP_CA_1195935_Lg12_RosCOS3293_MAF30_1655383_exon1SNP_CA_1195935_Lg12_RosCOS3293_MAF30_1655383_exon1marker_locus56.08 cM
Apple_HCGA_F1.12RosBREEDSNP_SNP_GA_1188294_Lg12_RosCOS3293_MAF20_1687495_exon1SNP_GA_1188294_Lg12_RosCOS3293_MAF20_1687495_exon1marker_locus56.89 cM
Apple_HCGA_F1.12RosBREEDSNP_SNP_GA_22208_Lg12_snpCN899883_MAF40_1670470_exon1SNP_GA_22208_Lg12_snpCN899883_MAF40_1670470_exon1marker_locus58.51 cM
Apple_HCGA_F1.12RosBREEDSNP_SNP_TC_31831_Lg12_snpCN899883_MAF40_1628145_exon2SNP_TC_31831_Lg12_snpCN899883_MAF40_1628145_exon2marker_locus58.51 cM
Apple_HCGA_F1.12RosBREEDSNP_SNP_AG_500084_Lg12_00173_MAF40_1659794_exon4SNP_AG_500084_Lg12_00173_MAF40_1659794_exon4marker_locus58.51 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CT_23489062_Lg2_02155_MAF10_255764_exon1SNP_CT_23489062_Lg2_02155_MAF10_255764_exon1marker_locus0 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CA_19157479_Lg9_106196_MAF40_106196_exon1SNP_CA_19157479_Lg9_106196_MAF40_106196_exon1marker_locus3.31 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_AG_23469119_Lg2_RosCOS2680_MAF30_137329_exon2SNP_AG_23469119_Lg2_RosCOS2680_MAF30_137329_exon2marker_locus3.31 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CA_23527388_Lg2_02155_MAF40_MDP0000138525_exon11SNP_CA_23527388_Lg2_02155_MAF40_MDP0000138525_exon11marker_locus3.31 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_AC_39662008_Lg13RosBREED_SNP_AC_39662008_Lg13marker_locus3.31 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CT_23515102_Lg2_02155_MAF20_696941_exon3SNP_CT_23515102_Lg2_02155_MAF20_696941_exon3marker_locus3.31 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CT_7125664_Lg11_01483_MAF40_558387_exon1SNP_CT_7125664_Lg11_01483_MAF40_558387_exon1marker_locus3.31 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CT_18390503_Lg2_RosCOS906_MAF40_1630085_exon1SNP_CT_18390503_Lg2_RosCOS906_MAF40_1630085_exon1marker_locus56.66 cM
Apple_HCGA_F1.13GDsnp02890GDsnp02890marker_locus56.66 cM
Apple_HCGA_F1.13GDsnp01316GDsnp01316marker_locus58.29 cM
Apple_HCGA_F1.13GDsnp01786GDsnp01786marker_locus59.1 cM
Apple_HCGA_F1.13GDsnp02452GDsnp02452marker_locus60.72 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CT_21716536_Lg13_02069_MAF40_MDP0000262190_exon1SNP_CT_21716536_Lg13_02069_MAF40_MDP0000262190_exon1marker_locus64.89 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CT_20377010_Lg13_02063_MAF40_708535_exon1SNP_CT_20377010_Lg13_02063_MAF40_708535_exon1marker_locus64.89 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_AC_20353369_Lg13_02063_MAF50_160796_exon1SNP_AC_20353369_Lg13_02063_MAF50_160796_exon1marker_locus64.89 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_CA_19786931_Lg13_01334_MAF40_MDP0000147060_exon3SNP_CA_19786931_Lg13_01334_MAF40_MDP0000147060_exon3marker_locus66.52 cM
Apple_HCGA_F1.13GDsnp00902GDsnp00902marker_locus68.17 cM
Apple_HCGA_F1.13GDsnp01844GDsnp01844marker_locus69.81 cM
Apple_HCGA_F1.13RosBREEDSNP_SNP_AG_15693091_Lg13_snpMalD1_MAF40_MDP0000218060_exon1SNP_AG_15693091_Lg13_snpMalD1_MAF40_MDP0000218060_exon1marker_locus73.09 cM
Apple_HCGA_F1.13GDsnp00140GDsnp00140marker_locus76.4 cM
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