Apple_HCGA_F1

Map Overview

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NameApple_HCGA_F1
SpeciesMalus x domestica
SoftwareJoinmap4.1
Population typeF1
Map typegenetic
Map unitcM
Paternal parentTwin Bee Gala
Population size125
Number of loci1042
Number of linkage groups17
Publication[view all]
ContactJames Luby
Stock
NameTypeDetails
Honeycrisp_x_Twin Bee Gala-F1population
Origin detail:University of Minnesota
Population size:125
Contact
NameDetails
James Luby
First name:James
Last name:Luby
Institution:Department of Horticultural Science, University of Minnesota, St. Paul, MN
Address:St Paul, MN 55104
Country:United States
Email:lubyx001@umn.edu
Map Loci
This map contains 1,042 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple_HCGA_F1.10RosBREEDSNP_SNP_TC_25240460_Lg15_RosCOS588_MAF40_MDP0000265238_exon1SNP_TC_25240460_Lg15_RosCOS588_MAF40_MDP0000265238_exon1marker_locus47.32 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GA_25224887_Lg15_RosCOS588_MAF40_MDP0000298612_exon1SNP_GA_25224887_Lg15_RosCOS588_MAF40_MDP0000298612_exon1marker_locus47.32 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TC_14019319_Lg14_CXE5_MAF20_MDP0000622367_exon2SNP_TC_14019319_Lg14_CXE5_MAF20_MDP0000622367_exon2marker_locus48.12 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CA_14009069_Lg14_CXE5_MAF40_192841_exon1SNP_CA_14009069_Lg14_CXE5_MAF40_192841_exon1marker_locus48.12 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_11952578_Lg10_CXE1_MAF10_MDP0000119954_exon1SNP_CT_11952578_Lg10_CXE1_MAF10_MDP0000119954_exon1marker_locus52.29 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GA_12451235_Lg10_00176_MAF20_1637244_exon4SNP_GA_12451235_Lg10_00176_MAF20_1637244_exon4marker_locus53.92 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GA_13016569_Lg10_RosCOS724_MAF30_1620203_exon3SNP_GA_13016569_Lg10_RosCOS724_MAF30_1620203_exon3marker_locus54.72 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_AG_13019481_Lg10_RosCOS724_MAF20_1621359_exon1SNP_AG_13019481_Lg10_RosCOS724_MAF20_1621359_exon1marker_locus54.72 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TC_9418092_Lg10_00875_MAF20_1667779_exon1SNP_TC_9418092_Lg10_00875_MAF20_1667779_exon1marker_locus55.53 cM
Apple_HCGA_F1.10GDsnp01867GDsnp01867marker_locus55.53 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_9480406_Lg10_00875_MAF30_268401_exon1SNP_CT_9480406_Lg10_00875_MAF30_268401_exon1marker_locus55.53 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TG_7167616_Lg10_02051_MAF40_1633843_exon1SNP_TG_7167616_Lg10_02051_MAF40_1633843_exon1marker_locus57.16 cM
Apple_HCGA_F1.10GDsnp02051GDsnp02051marker_locus57.16 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CA_2705271_Lg10_00056_MAF20_MDP0000183449_exon2SNP_CA_2705271_Lg10_00056_MAF20_MDP0000183449_exon2marker_locus57.96 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_4032707_Lg10_01810_MAF30_483396_exon2SNP_CT_4032707_Lg10_01810_MAF30_483396_exon2marker_locus57.96 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GA_4045102_Lg10_01810_MAF20_1636495_exon3SNP_GA_4045102_Lg10_01810_MAF20_1636495_exon3marker_locus57.96 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TG_18569842_Lg5_00323_MAF10_770826_exon1SNP_TG_18569842_Lg5_00323_MAF10_770826_exon1marker_locus59.59 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_2443675_Lg10_01909_MAF50_760651_exon1SNP_CT_2443675_Lg10_01909_MAF50_760651_exon1marker_locus59.59 cM
Apple_HCGA_F1.10GDsnp00106GDsnp00106marker_locus62.88 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GA_377816_Lg10_01789_MAF50_MDP0000257837_exon3SNP_GA_377816_Lg10_01789_MAF50_MDP0000257837_exon3marker_locus63.71 cM
Apple_HCGA_F1.10GDsnp01789GDsnp01789marker_locus63.71 cM
Apple_HCGA_F1.11RosBREEDSNP_SNP_CT_40016890_Lg11_00182_MAF50_MDP0000370712_exon1SNP_CT_40016890_Lg11_00182_MAF50_MDP0000370712_exon1marker_locus0 cM
Apple_HCGA_F1.11RosBREEDSNP_SNP_GA_39914254_Lg11_237065_MAF50_237065_exon1SNP_GA_39914254_Lg11_237065_MAF50_237065_exon1marker_locus0 cM
Apple_HCGA_F1.11RosBREEDSNP_SNP_GA_39914390_Lg11_237065_MAF50_237065_exon1SNP_GA_39914390_Lg11_237065_MAF50_237065_exon1marker_locus0 cM
Apple_HCGA_F1.11RosBREEDSNP_SNP_GA_39190659_Lg11_00646_MAF40_1634484_exon1SNP_GA_39190659_Lg11_00646_MAF40_1634484_exon1marker_locus0.81 cM
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