AT000174SSR, AT000174SSR (genetic_marker) Malus x domestica

Marker Overview
NameAT000174SSR
Genbank IDN/A
TypeSSR
SpeciesMalus x domestica
Repeat MotifTA-GTA-GT
Primer 1AT000174SSR.F: CGGAGGCCGCTATAATTAGG
Primer 2AT000174SSR.R: CCTGGAAAGAAAGTAAAAGGACA
Publication[view all]
ContactMiyuki Kunihisa
Andrea Patocchi
Contact
NameDetails
Miyuki Kunihisa
First name:Miyuki
Last name:Kunihisa
Institution:NARO Institute of Fruit Tree Science
Address:2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:Japan
Email:miyuky@affrc.go.jp
Phone:81-29-838-6437
Keywords:fruit drop
Andrea Patocchi
First name:Andrea
Last name:Patocchi
Title:researcher
Institution:Plant Pathology, Institute of Integrative Biology (IBZ)
Address:ETH Zurich, CH-8092 Zurich, Switzerland
Country:Switzerland
Email:andrea.patocchi@agrl.ethz.ch
Keywords:SSR
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr17chromosomeChr17:3602452..3602627 .Malus x domestica GDDH13 v1.1 Whole Genome Assembly & AnnotationGDR marker alignment to genome using primer sequences
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-OA-F1-OrinOR17N/A7.5AT000174SSRView
2Apple-OA-F1-AkaneAK17-1N/A5.3AT000174SSRView
3Pear-Ba-F1-2013Ba17N/A4.8AT000174SSRView
4Pear-integrated_consensus_map-IPCG-2017LG17N/A85.16AT000174SSRView