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Marker Overview
Name | SVP |
dbSNP ID | N/A |
SNP Array ID | Cherry 6+9K SNP array: | SVP |
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Type | SNP |
SNP Alleles | A/G |
5' Flanking Sequence | AAAATTTGAGGGTTGGTTGTGTTTATTTTATTGGGGGTGAAAAATGAGGA |
3' Flanking Sequence | GAGGAGGAGGAGGAGGAGGAGGAAGACCCACGTCAATGGAAGTGGCTGCT |
Species | Prunus avium |
Publication | [view all] |
Contact | Stijn Vanderzande
|
Comment | 'Regina' [A/G]
'Lapins' [A/A]
'Garnet' [A/G] |
Publications
Year | Publication |
2015 | Castède S, Campoy JA, Le Dantec L, Quero-García J, Barreneche T, Wenden B, Dirlewanger E. Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium). PloS one. 2015; 10(11):e0143250. |
2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>SVP ID=SVP; Name=SVP; organism=Prunus avium; type=genetic_marker; length=101bp AAAATTTGAGGGTTGGTTGTGTTTATTTTATTGGGGGTGAAAAATGAGGA RGAGGAGGAGGAGGAGGAGGAGGAAGACCCACGTCAATGGAAGTGGCTGC T
Alignments
Feature Name | Type | Location | Analysis |
Pp06 |
chromosome |
Pp06:20565244..20565244. |
Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1) |
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