PavSUF4, PavSUF4 (genetic_marker) Prunus avium

Marker Overview
NameSUF4
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:SUF4
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTATCCAATCCCCATCGAACCTGGTACCATACCACCAACAAACTGGGTTGA
3' Flanking SequenceGGGATGTCCACTTTAGCTACTTTTGATGGAGCGTCCTCATCTGCAAATA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [T/T] 'Lapins' [C/T] 'Garnet' [C/T]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G4N/A38SUF4View
2Sweet Cherry-RL-F1-2015L4N/A21.28SUF4View
3Sweet Cherry-RosBREED-3.8K-20204N/A20.73SUF4View
4Sweet Cherry-C-F1-6+9K_array4N/A33.48SUF4View
5Sweet Cherry-VxC-F1-6+9K_array4N/A29.41SUF4View
Sequence
>SUF4 ID=SUF4; Name=SUF4; organism=Prunus avium; type=genetic_marker; length=100bp
TATCCAATCCCCATCGAACCTGGTACCATACCACCAACAAACTGGGTTGA
YGGGATGTCCACTTTAGCTACTTTTGATGGAGCGTCCTCATCTGCAAATA
Alignments
Feature NameTypeLocationAnalysis
Pp04 chromosome Pp04:6350829..6350829. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr4 chromosome PAV_r1.0chr4:8399387..8399387. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)