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Marker Overview
Name | s1_28074311 |
dbSNP ID | N/A |
SNP Array ID | Cherry 6+9K SNP array: | s1_28074311 |
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Type | SNP |
SNP Alleles | A/G |
5' Flanking Sequence | AACGAAGGAGGCGAAGGAGCTCACGGAGGCAGAGAGGAAGCTGATGCATGAGAACTTGGT
GAAGGACGCTAGAGCTCTGGGTATCATCCAAGGGGCTGTATCAGATCAAATTTTTCCACG
AATTGCAACTCAGGAATCTGCAAAGGCTGC |
3' Flanking Sequence | TGGGATATTCTGAAACAAGAATTTGTGGGTGATAAGCAGGTAAGATCCGTGAAACTTCAG
GGTCTTAGGGGTGATTTTGAATATACTCGGATGAGTGATAATGAATCTTTGTTTGGATAT
ATTGCTAAGTTGTTTGATCTGATCAACCAA |
Species | Prunus avium |
Publication | [view all] |
Contact | Patricio Hinrichsen Stijn Vanderzande
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Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs |
Alignments
The following features are aligned
Publications
Year | Publication |
2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s1_28074311 ID=s1_28074311; Name=s1_28074311; organism=Prunus avium; type=genetic_marker; length=301bp AACGAAGGAGGCGAAGGAGCTCACGGAGGCAGAGAGGAAGCTGATGCATG AGAACTTGGTGAAGGACGCTAGAGCTCTGGGTATCATCCAAGGGGCTGTA TCAGATCAAATTTTTCCACGAATTGCAACTCAGGAATCTGCAAAGGCTGC RTGGGATATTCTGAAACAAGAATTTGTGGGTGATAAGCAGGTAAGATCCG TGAAACTTCAGGGTCTTAGGGGTGATTTTGAATATACTCGGATGAGTGAT AATGAATCTTTGTTTGGATATATTGCTAAGTTGTTTGATCTGATCAACCA A
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