AX-89812476, AX-89812476 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812476
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88813056
TypeSNP
SNP AllelesA/C
Probe 1AX-89812476.AX-89812476: CTAAGGAAACTAAACGTCTTCTAGAAAGGA
5' Flanking SequenceTCACTGATTCCTTTGATTTGCAGAAGATCTTTCCT
3' Flanking SequenceGGTGAGTAAGCAACAGCTTCAACGGTGCAAAGACC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812476 ID=AX-89812476; Name=AX-89812476; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCACTGATTCCTTTGATTTGCAGAAGATCTTTCCTMGGTGAGTAAGCAAC
AGCTTCAACGGTGCAAAGACC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:5050441..5050511+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4315184..4315254+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4609757..4609827+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6587583..6587653+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:80446..80516- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23062030..23062100- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6635266..6635266. Fragaria vesca Whole Genome v1.1 Assembly & Annotation