AX-89850912, AX-89850912 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850912
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88894752
TypeSNP
SNP AllelesA/G
Probe 1AX-89850912.AX-89850912: CCGCAAAAATCTTGTAACCGAAGTTCCGTA
5' Flanking SequenceTAAGCGGCGTTTTTAGAACATTGGCTTCAAGGCAT
3' Flanking SequenceTTGTAGCAACGCTATCTTTCAGACTATATTTGCCC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850912 ID=AX-89850912; Name=AX-89850912; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TAAGCGGCGTTTTTAGAACATTGGCTTCAAGGCATRTTGTAGCAACGCTA
TCTTTCAGACTATATTTGCCC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:3788430..3788500+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:3631943..3631990+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:3782822..3782869+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:18342242..18342289+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:4238633..4238680- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:14668239..14668286- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:8604135..8604182- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:26749093..26749127- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:25706236..25706283+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:8315850..8315891+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:8312286..8312320+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:9285861..9285906- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-4 chromosome Fvb5-4:3518667..3518714- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:20498290..20498321- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:8228234..8228234. Fragaria vesca Whole Genome v1.1 Assembly & Annotation