|
Marker Overview
Name | JPsnpHou00442 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | A/T |
5' Flanking Sequence | CCAACAGATGTGGATTTCCAAGGGTGAGTACGACGAGTCAGGTCCATCCATTGTCCACAG
GAAGTGCTTCTGAGTTCTCCAAATGGTTTTGATGGTGAGCTATTTTTCAATTTAGTTGGA
TTTTTGTGTCGTGTCATGTGAAGTAAGTTTGGTTGGCAACGATGTGTTGAGGTGGGGTCA
CTCGAGGACGGGGTAGATTCAGATGTTGACTTCTCATCCACGCGAGAGATTTTGCTTGCA
ATGGCAAATGGTTCTATGTATATGTGGTGGGCAGAA |
3' Flanking Sequence | ATCAGTCCAAAACCATCCTCGCCTTGCCTAATCnTTGGTTCAACCATCTATTTCGGTAGG
ATGTTTGTAGCAGGAGAGTGATTGGGATGCTTTTCTTCGTCTTCCTTTTATTTCACTTTT
GTTCTATATTTGACGGTCTTTTTTCATCCGGGAACATTAATATTAATAGTTTTTATTGTA
TCTGAAAGTTTATTGTAGCGTCAGTTTGTGGTCGAAAACTGGTATGCAAATTTATATTTA
AATACTGGCTTGAAAGCTTGAGAGGAATCTGTTTTTCTCTTGTGTGCTTGCATTTGTTAT
TTCTTTGAAGGTTTGTTTTGTTGGTCTTTTTGTTAGTTTGTCAGGGTAATCGTAGGCCTC
AAATGTTTTATATGGCATGGCATTTGCCAATTGTATGCGAGGCCTGCCAC |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
|
Comment | SNP position in sequence: 277 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00442 ID=JPsnpHou00442; Name=JPsnpHou00442; organism=Pyrus pyrifolia; type=genetic_marker; length=687bp CCAACAGATGTGGATTTCCAAGGGTGAGTACGACGAGTCAGGTCCATCCA TTGTCCACAGGAAGTGCTTCTGAGTTCTCCAAATGGTTTTGATGGTGAGC TATTTTTCAATTTAGTTGGATTTTTGTGTCGTGTCATGTGAAGTAAGTTT GGTTGGCAACGATGTGTTGAGGTGGGGTCACTCGAGGACGGGGTAGATTC AGATGTTGACTTCTCATCCACGCGAGAGATTTTGCTTGCAATGGCAAATG GTTCTATGTATATGTGGTGGGCAGAAwATCAGTCCAAAACCATCCTCGCC TTGCCTAATCnTTGGTTCAACCATCTATTTCGGTAGGATGTTTGTAGCAG GAGAGTGATTGGGATGCTTTTCTTCGTCTTCCTTTTATTTCACTTTTGTT CTATATTTGACGGTCTTTTTTCATCCGGGAACATTAATATTAATAGTTTT TATTGTATCTGAAAGTTTATTGTAGCGTCAGTTTGTGGTCGAAAACTGGT ATGCAAATTTATATTTAAATACTGGCTTGAAAGCTTGAGAGGAATCTGTT TTTCTCTTGTGTGCTTGCATTTGTTATTTCTTTGAAGGTTTGTTTTGTTG GTCTTTTTGTTAGTTTGTCAGGGTAATCGTAGGCCTCAAATGTTTTATAT GGCATGGCATTTGCCAATTGTATGCGAGGCCTGCCAC
|