PruarS.5G080900.t1.p1

Transcript Overview
NamePruarS.5G080900.t1.p1
Unique NamePruarS.5G080900.t1.p1_PruarS_v1.0
TypemRNA
OrganismPrunus armeniaca (Apricot)
Sequence length987
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:5272028..5274077 -Prunus armeniaca cv.Stella Whole Genome v1.0 Assembly & Annotationn/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PruarS.5G080900PruarS.5G080900_PruarS_v1.0Prunus armeniacagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PruarS.5G080900.t1.p1PruarS.5G080900.t1.p1_PruarS_v1.0-proteinPrunus armeniacapolypeptide
PruarS.5G080900.t1.p1_PruarS_v1.0PruarS.5G080900.t1.p1_PruarS_v1.0Prunus armeniacapolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
PruarS.5G080900.t1.p1.exon1PruarS.5G080900.t1.p1.exon1_PruarS_v1.0Prunus armeniacaexon
PruarS.5G080900.t1.p1.exon2PruarS.5G080900.t1.p1.exon2_PruarS_v1.0Prunus armeniacaexon
PruarS.5G080900.t1.p1.exon3PruarS.5G080900.t1.p1.exon3_PruarS_v1.0Prunus armeniacaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.PruarS.5G080900.t1.p1cds.PruarS.5G080900.t1.p1_PruarS_v1.0Prunus armeniacaCDS


Homology
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1039831643|ref|XP_017190469.1| (PREDICTED: uncharacterized protein LOC108174286 [Malus domestica])

HSP 1 Score: 326.635 bits (836), Expect = 1.140e-100
Identity = 151/200 (75.50%), Postives = 169/200 (84.50%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + E VNTAVYILNRCPSKSLKK+TPFEAYTGRKPGIAHLKIFGSLCYVH+PSTLRH         IFVGYG+CEK Y+VFDPSS+KIIL RDV FDENASW+WENTDKSE++VPM  ENQMA CSEG  Q EVCEP Q LDTSTQV++V+   SE++ E+SQ  DHTP KWRS+NEIMAQCNMCIVEPE+YE+A LDES
Sbjct:  596 FWAEXVNTAVYILNRCPSKSLKKITPFEAYTGRKPGIAHLKIFGSLCYVHIPSTLRHKLEENSRKCIFVGYGICEKGYRVFDPSSNKIILXRDVHFDENASWEWENTDKSEIQVPMIIENQMADCSEGQNQVEVCEPRQFLDTSTQVEDVVASLSENVFESSQTTDHTPQKWRSVNEIMAQCNMCIVEPENYEDAILDES 795

HSP 2 Score: 127.872 bits (320), Expect = 6.954e-29
Identity = 69/109 (63.30%), Postives = 80/109 (73.39%), Query Frame = 0 
Query:   55 LNVGGKNPMGG-----VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIF--YEAVNTAVYIL---NRC 153
            ++ G  N M G     +NIQRNLTS++KMGTGEIV VAGKGTLVIETKLGRKHIQEV LV GLEENLL VG M+EH YYL+F GN+V+IF  +   N  V +    NRC
Sbjct:  346 IDSGCSNHMTGDERLLINIQRNLTSRVKMGTGEIVXVAGKGTLVIETKLGRKHIQEVMLVXGLEENLLXVGQMMEHXYYLLFXGNIVSIFDGWSMDNLVVRVQMTNNRC 454

HSP 3 Score: 115.546 bits (288), Expect = 9.716e-25
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNVGGKNPMG 64
            ++ LPRSYDPICS+IEHSKDLETLE+Q VVASLKSFEL LDRHAE+STERAFASLNVGGKN  G
Sbjct:  171 LISLPRSYDPICSVIEHSKDLETLEIQXVVASLKSFELXLDRHAENSTERAFASLNVGGKNSKG 234
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|645266426|ref|XP_008238606.1| (PREDICTED: uncharacterized protein LOC103337221 [Prunus mume])

HSP 1 Score: 223.787 bits (569), Expect = 6.884e-68
Identity = 118/174 (67.82%), Postives = 127/174 (72.99%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNVGGKNPMGG-----------------------------------VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIF 139
            ++ LPRSYDPICSMIEHSKDLETLEVQ+VVA LKSFELRLDRHA+DSTERAFASLNVGGK    G                                   VNIQRNLTSK+KMGTGEIV VAGKGTLV+ETKLG KHIQEV LV GL+EN LSVG MV+HGYYL+FGGNVVNIF
Sbjct:   80 LISLPRSYDPICSMIEHSKDLETLEVQKVVAFLKSFELRLDRHAKDSTERAFASLNVGGKPKCTGCGKFGHVLRDCNGNKTIQKVNYANQVEETSDERLLVNIQRNLTSKVKMGTGEIVHVAGKGTLVMETKLGMKHIQEVMLVPGLKENFLSVGQMVDHGYYLMFGGNVVNIF 253
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1162511535|ref|XP_020412646.1| (uncharacterized protein LOC109947213 [Prunus persica])

HSP 1 Score: 215.698 bits (548), Expect = 5.703e-64
Identity = 113/180 (62.78%), Postives = 126/180 (70.00%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNVGGKNPMGG-----------------------------------------VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIF 139
            +  LP+SYDPICS+IEHSKDLETLEVQEVVASLKSFELRLDRH E+STERAFASLN+  KNP  G                                         VNIQRNLTSK+KMGTGE+V VAGKGTLVI+ KLG+KHIQ V LV GLEENLLSVG M+EHGYYLVFGGN+VN++
Sbjct:  141 LFSLPKSYDPICSVIEHSKDLETLEVQEVVASLKSFELRLDRHTENSTERAFASLNIEEKNPKSGSFSGDQKSQKNWKSSDGVKKNHSWYIDSGCSNHMTGDEGLLVNIQRNLTSKVKMGTGEVVPVAGKGTLVIKIKLGKKHIQGVMLVPGLEENLLSVGQMMEHGYYLVFGGNMVNVY 320
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1162533979|ref|XP_020415636.1| (uncharacterized protein LOC109948114 [Prunus persica])

HSP 1 Score: 173.711 bits (439), Expect = 2.844e-48
Identity = 94/145 (64.83%), Postives = 99/145 (68.28%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNVGGKNPMGG------------------------------------------VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHI 103
            ++ LPRSYDPICS+IEHSKDLETLEVQEVVASLKSFEL+LDRHAEDSTE AFASLNVGGKN  GG                                          VNIQRNLTSK+KMGTGEIVQVAGKGTLVIETKLGRKHI
Sbjct:  171 LISLPRSYDPICSVIEHSKDLETLEVQEVVASLKSFELKLDRHAEDSTEMAFASLNVGGKNSAGGGKPKCTSCGKFGHVLRDCNGNKSIQKVNYVNQVEETGDKRLLVNIQRNLTSKVKMGTGEIVQVAGKGTLVIETKLGRKHI 315
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|657979304|ref|XP_008381610.1| (PREDICTED: uncharacterized protein LOC103444461 [Malus domestica])

HSP 1 Score: 169.474 bits (428), Expect = 3.754e-46
Identity = 93/198 (46.97%), Postives = 122/198 (61.62%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNV--------------------------------GGKNP----------------------MGG-----VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIF 139
            ++ LP +YD ICS+IEHS DL+ +EVQEVVASLKSFELRLDRH+E  TE+AFASLNV                                G +NP                      M G     V+I +N+T+K++MGTG++V V GKG+L++ETK+G+++I+EV LV GL+ENLLSVG M+EHGYYLVFGG+ V I+
Sbjct:  144 LISLPSAYDSICSVIEHSNDLDVIEVQEVVASLKSFELRLDRHSEHKTEKAFASLNVNPKPAKFTGNQSARYHKNWKEKGKRWDNKPTDGARNPCKHCDKLHFGECRFKDSGCSNHMTGREDLLVDIDKNVTAKVEMGTGQLVDVTGKGSLIVETKIGKRYIKEVMLVPGLKENLLSVGQMMEHGYYLVFGGHKVEIY 341
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1039911884|ref|XP_017182205.1| (PREDICTED: uncharacterized protein LOC108171073 [Malus domestica])

HSP 1 Score: 166.777 bits (421), Expect = 1.455e-44
Identity = 96/215 (44.65%), Postives = 128/215 (59.53%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNV--------------------------------GGKNP----------------------MGG-----VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIFYEAVNTAVYILNRCPSK 156
            ++ LP +YD IC +IEHSKDL+ +EVQEVVASLKSFELRLDRH+E  TE+AF SLNV                                G +NP                      M G     V+I +N+T+K++MGTG++V V GKG+LV+ETKLG ++I+EV LV GL+ENLLS+G M+EHGYYLVFGG+ V I+ ++  +   ++ R P K
Sbjct:  175 LISLPSAYDSICFVIEHSKDLDVIEVQEVVASLKSFELRLDRHSEHKTEKAFTSLNVNSKPAKFTGNQNARYQKNWKEKGKRWDNKPTDGARNPCKHCDKLHFGECRFKDSGCSNHMTGREDLLVDIDKNVTAKVEMGTGQLVDVTGKGSLVVETKLGDRYIKEVMLVPGLKENLLSLGQMMEHGYYLVFGGHKVEIYDDSSYSN--MVARVPMK 387
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1039835841|ref|XP_017191138.1| (PREDICTED: uncharacterized protein LOC108174553 [Malus domestica])

HSP 1 Score: 154.451 bits (389), Expect = 6.311e-40
Identity = 81/173 (46.82%), Postives = 119/173 (68.79%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNV------------GGKNPMGG-----VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIFYEAVNTAVYILNRCPSK 156
            ++ LPRSYD I  +I+ ++DLET++VQ+VVA+LK +E R++RH++D  E++FASL V            G  N M       VNI + +T+K++MGTG++V V GKG L++ETK G+++I+E+  V GL+ENLLSVG M+EHGYYLVFGG  V I+ +A  T   ++ + P K
Sbjct:  164 LISLPRSYDSIVVVIKKTRDLETVDVQDVVATLKEYEQRIERHSKDRNEKSFASLTVVKKHEDTWYIDSGCSNHMTEREYLLVNIDKKVTAKVEMGTGQLVDVVGKGDLMVETKQGKRYIREIMFVPGLKENLLSVGQMMEHGYYLVFGGIEVRIYDDA--TCSNLVVKVPMK 334
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1039928653|ref|XP_017185606.1| (PREDICTED: uncharacterized protein LOC108172496 [Malus domestica])

HSP 1 Score: 148.288 bits (373), Expect = 5.779e-38
Identity = 77/177 (43.50%), Postives = 109/177 (61.58%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFAS-----------------------------------------LNVGGKNPMGG-----VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVF 131
            ++ LP  YDPIC +IEHS+D++ +EVQ VVASLKSF  RL+RH+E+ TERAFA                                          ++ G  N M G     V++ R++T+K++MGTG++V V GKG+LV++TK+GR++I+EV LV GL+ENLLSVG M+EHGY+L+ 
Sbjct:  183 LISLPFVYDPICXVIEHSRDIDVIEVQXVVASLKSFAQRLERHSENKTERAFARHIARDCNNKKNVQQLNYATQVPTMFYVNNAVDKKSMEDVWYVDSGYSNHMTGRDDVLVDVDRSITAKVEMGTGQLVDVVGKGSLVVDTKMGRRYIKEVMLVSGLKENLLSVGQMMEHGYFLIL 359
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1079226954|ref|XP_018504975.1| (PREDICTED: uncharacterized protein LOC108867808 [Pyrus x bretschneideri])

HSP 1 Score: 137.502 bits (345), Expect = 1.214e-35
Identity = 75/163 (46.01%), Postives = 102/163 (62.58%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNV-------------------GGKNPMGG-----VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIF 139
            ++ L + YD I S+IE +KD+ETL VQ+V+ SL++F  RL+RHA+ + E+AF SLNV                   G  N M       ++I  N T K+KM  G IV+   +GTLVI TK  R+ I++V LV GL+ENLLSVG M+EHGY+L+FGG VV I+
Sbjct:   38 LISLTKPYDSIMSVIEETKDIETLSVQDVMTSLRAFGQRLERHADFAPEKAFQSLNVASVEGAKVEKNNEVWYVDSGCSNHMAAHESLLIDIDTNFTGKVKMRNGNIVKATRRGTLVINTKKERRCIKKVMLVPGLDENLLSVGQMIEHGYFLLFGGTVVEIY 200
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Match: gi|1012349801|gb|KYP60991.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 145.976 bits (367), Expect = 1.280e-35
Identity = 81/205 (39.51%), Postives = 122/205 (59.51%), Query Frame = 0 
Query:  137 NIFY-EAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKW--ENTDKSEMRVPMFAENQMASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMV--ENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDE 327
            N F+ EAV TAVY+LNRCP+K+++  TP EA++G+KP   HL++FGS+CY+HVP   RH         IF+GY    K Y+V++  + K+ +SRD+  DENA+W W  E  +K  + +P+   NQ  +               SL+ + Q D VI+P+S  +V  +   + + TP + RS+ +I   CN+ I+EP S+EEAA  E
Sbjct:   95 NTFWAEAVYTAVYLLNRCPTKAVRDKTPIEAWSGKKPSAKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYSSQSKGYRVYNLQTKKLTISRDIEVDENATWNWEEERIEKKTIYMPI---NQPTTS--------------SLEDNNQ-DIVISPESPRIVPQQEESSPESTPRRVRSLVDIYETCNLAILEPGSFEEAANQE 281
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A5H2XQ13_PRUDU (Multidrug resistance-associated protein 9 (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_702S000100 PE=4 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 5.999e-113
Identity = 208/418 (49.76%), Postives = 245/418 (58.61%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNVGGKNPMGGV-----NIQRNLTS------------KLKMGTGEI-----VQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLL--------------------------------SVGHMVEHGYYLVFGGNVVNI-FYEAVNTA-------------------VYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCSEG-HKQFEV-------CEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDE 327
            +  LP+SYD  CS+IEHSKDLETLEVQEVVA LKSFELRLDRH E+STERAF SLN+  KN   G        Q++  S            KL  G             GK   +I    G K++ +V   + +E  +L                                SVG M+EHGYYLVFGGN++ I F+   N                     VY+LNRCP+KSLKKVTPFEAYTGRKPGIAHLKIFGS C+V +PS LRH         IFVGYGLCEK Y +FDPS+ K+I+SRDV FDEN SWKWEN    EM VP+  ENQ  + S+    Q ++        EPSQSLDT TQ+DE    Q E + E+SQAIDHTP KWRS+NEIMAQCNMCIVEP+S+EEA LDE
Sbjct:  432 LFSLPKSYDSFCSVIEHSKDLETLEVQEVVAFLKSFELRLDRHTENSTERAFTSLNIEEKNSKSGSFPGDQKSQKSWKSNDENKTACKHYDKLHYGKCWFEGKPKCHGCGKFRHMIRDCNGNKNVHKVNYANQVEGTVLCSMKRDSCDKTKLGKKHIQEVMLVPGLEENLLSVGQMMEHGYYLVFGGNMLTIAFFPQQNEVAERKNRTVVEMAKSMLHEKVYLLNRCPTKSLKKVTPFEAYTGRKPGIAHLKIFGSPCHVLIPSALRHKLEENSHKCIFVGYGLCEKGYMLFDPSTRKVIMSRDVQFDENGSWKWENASAGEMTVPVPTENQNWNPSQSLDTQMQMDEGITLQNEPSQSLDTPTQMDEGFNLQDEGISESSQAIDHTPKKWRSVNEIMAQCNMCIVEPDSFEEADLDE 849
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A5H2XRA8_PRUDU (Multidrug resistance-associated protein 9 OS=Prunus dulcis OX=3755 GN=Prudu_863S000100 PE=4 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.763e-83
Identity = 126/200 (63.00%), Postives = 155/200 (77.50%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + EAV+TAVY+LNRCPSKSL+K+TPFEAYTGRKPGIAHLK+FG LC+V +PS LRH         IFVGYGLCEK Y+++DP + KIILSRDV FDE  SWKWEN   +++R+PM   NQ  + +E   Q  + E SQ LDT  Q++E I PQ E+M++ +Q +DHTPHKWRSIN+IMAQCNMCIVEP+S+EEA LDES
Sbjct:   15 FWAEAVHTAVYLLNRCPSKSLEKMTPFEAYTGRKPGIAHLKVFGCLCHVLIPSVLRHKLEENSHKCIFVGYGLCEKGYRLYDPKTRKIILSRDVYFDEEVSWKWENPSNADVRMPMPDGNQGTAETE---QRVLDEQSQFLDTQMQMEEEIAPQGEEMLDETQRLDHTPHKWRSINDIMAQCNMCIVEPDSFEEADLDES 211
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A4Y1QVX1_PRUDU (Multidrug resistance-associated protein 9 OS=Prunus dulcis OX=3755 GN=Prudu_004693 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 4.912e-83
Identity = 126/200 (63.00%), Postives = 155/200 (77.50%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + EAV+TAVY+LNRCPSKSL+K+TPFEAYTGRKPGIAHLK+FG LC+V +PS LRH         IFVGYGLCEK Y+++DP + KI+LSRDV FDE ASWKWEN   +++ VPM   NQ  + +E   Q  + + SQ LDT  Q++E I PQ E+M+E +Q +DHTPHKWRSIN+IMAQCNMCIVEP+S+EEA LDES
Sbjct:   15 FWAEAVHTAVYLLNRCPSKSLEKMTPFEAYTGRKPGIAHLKVFGCLCHVLIPSVLRHKLEENSHKCIFVGYGLCEKGYRLYDPKTRKIVLSRDVYFDEEASWKWENPSNADVGVPMPDGNQNTAETE---QRVLDDHSQFLDTQMQMEEEIAPQGEEMLEETQRLDHTPHKWRSINDIMAQCNMCIVEPDSFEEADLDES 211
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A4Y1RZW2_PRUDU (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_021739 PE=4 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 5.405e-83
Identity = 140/235 (59.57%), Postives = 159/235 (67.66%), Query Frame = 0 
Query:  133 GNVVNIFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCS------------------------------EGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
            G   + + EAVNTAVY+LNRCP+KSLKKVTPFEAYTGRK GIAHLKIFGS C+V +PS LRH         IFVGYGLCEK Y++FDPS+ K+ILSRDV FDEN SWKWEN    EM VP+ AENQ  + S                              EG  Q +  EPSQSLDT  Q+DE  T Q E + E+SQAIDHTP KWRS+NEIMAQCNMCIVEP+S+EEA LDES
Sbjct:   10 GMTYDFWAEAVNTAVYLLNRCPTKSLKKVTPFEAYTGRKLGIAHLKIFGSPCHVLIPSALRHKLEENSHKCIFVGYGLCEKGYRLFDPSTRKVILSRDVQFDENGSWKWENASAGEMTVPVPAENQHCNPSQSLDTQIQMDERITQQDEPSQSLDTQMQMDEGITQQD--EPSQSLDTPIQMDEGFTLQDEGISESSQAIDHTPKKWRSVNEIMAQCNMCIVEPDSFEEADLDES 242
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A4Y1QPS0_PRUDU (Multidrug resistance-associated protein 9 OS=Prunus dulcis OX=3755 GN=Prudu_001964 PE=4 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 9.097e-81
Identity = 127/200 (63.50%), Postives = 154/200 (77.00%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + EAV+TAVY+LNRCPSKSLKK+TPFEAYTGRKPGIAHLK+FG LC+V +PS LRH         IFVGYGLCEK Y+++DP + KIILSRDV FDE ASWKWEN   +++R+PM   NQ  + +E   Q  + E SQ LDT  Q++E I PQ E+M++ +Q  DHTPHKWRSIN+IM QCNMCIVEP+S+EEA LDES
Sbjct:   54 FWAEAVHTAVYLLNRCPSKSLKKMTPFEAYTGRKPGIAHLKVFGCLCHVLIPSVLRHKLEENSHKCIFVGYGLCEKGYRLYDPKTRKIILSRDVYFDEEASWKWENPSNADVRMPMPDGNQGTAETE---QRVLDEQSQFLDTQMQMEEEIAPQGEEMLDETQRFDHTPHKWRSINDIMTQCNMCIVEPDSFEEADLDES 250
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A4Y1R5C3_PRUDU (Multidrug resistance-associated protein 9 OS=Prunus dulcis OX=3755 GN=Prudu_008794 PE=4 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.647e-80
Identity = 127/200 (63.50%), Postives = 154/200 (77.00%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + EAV+TAVY+LNRCPSKSLKK+TPFEAYTGRKPGIAHLK+FG LC+V +PS LRH         IFVGYGLCEK Y+++DP + KIILSRDV FDE ASWKWEN   +++R+PM   NQ  + +E   Q  + E SQ LDT  Q++E I PQ E+M++ +Q  DHTPHKWRSIN+IM QCNMCIVEP+S+EEA LDES
Sbjct:   15 FWAEAVHTAVYLLNRCPSKSLKKMTPFEAYTGRKPGIAHLKVFGCLCHVLIPSVLRHKLEENNHKCIFVGYGLCEKGYRLYDPKTRKIILSRDVYFDEEASWKWENPSNADVRMPMPDGNQGTAETE---QRVLDEQSQFLDTQMQMEEEIAPQGEEMLDETQRFDHTPHKWRSINDIMTQCNMCIVEPDSFEEADLDES 211
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A5H2XV89_PRUDU (Multidrug resistance-associated protein 9 OS=Prunus dulcis OX=3755 GN=Prudu_1457S001300 PE=4 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 4.972e-76
Identity = 127/200 (63.50%), Postives = 146/200 (73.00%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + EAVNTAVY+LNRCP+KSL KVTPFEAYTGRKPGIAHLKIFGS C+V +PS LRH         I VGYGLCEK Y++FDPS+ KIILSRDV FDE+  WKW+N  + E+ VPM AENQ             CEPS  LD STQ+ E    Q   + E+SQA DHTP KWRS+NEIMAQCN+CIVEPES+E+A LDES
Sbjct:  263 FWAEAVNTAVYLLNRCPTKSLNKVTPFEAYTGRKPGIAHLKIFGSPCHVLIPSALRHKLEENSHKCILVGYGLCEKGYRLFDPSTRKIILSRDVHFDEDGLWKWDNAQEGEITVPMPAENQN------------CEPSLDLDISTQMGENTILQDGRISESSQAFDHTPKKWRSVNEIMAQCNICIVEPESFEDANLDES 450
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A4Y1RG61_PRUDU (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_013791 PE=4 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 5.745e-75
Identity = 126/208 (60.58%), Postives = 149/208 (71.63%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQM--------ASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + EAVNTAVY+LNRCP+K+L KVTPFEA+TGRKPG+AHLKIFGS C+V +PS LRH         IFVGYGLCEK Y++FDPS+ KIILSRDV FDE + WKW+N  + E+ VPM AENQ          S     +     EPSQ LD STQ+ E    Q   +  +SQAIDHTP KWRS+NEIMAQCNMCIVEPE++E+A LDES
Sbjct:  247 FWAEAVNTAVYLLNRCPTKALNKVTPFEAFTGRKPGVAHLKIFGSPCHVLIPSALRHKLEENSHKCIFVGYGLCEKGYRLFDPSNRKIILSRDVKFDEESLWKWDNVQEGEIIVPMPAENQNCEPRLDLDTSLQMDAETLVQDEPSQDLDISTQMGENTILQDGRISGSSQAIDHTPKKWRSVNEIMAQCNMCIVEPENFEDANLDES 454
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A4Y1RYV8_PRUDU (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_021374 PE=4 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.481e-74
Identity = 121/203 (59.61%), Postives = 148/203 (72.91%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQ-------MASCSEGHKQ-FEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEA 323
             + EAVNTAVY+LNRCP+K+L KVTPFEAYTGRKPG+AHLKIFGS C+V +PS LRH         IFVGYGL +K Y++FDPS+ KIILSRDV FDE + WKWEN  + EM V +   NQ       + +  + H++   + EPSQSLDT TQ D   T Q E +  +SQAIDHTP KW+SIN+IMAQCNMCI+EPE++EEA
Sbjct:   75 FWAEAVNTAVYLLNRCPTKALNKVTPFEAYTGRKPGVAHLKIFGSPCHVLIPSALRHKLEENSHKCIFVGYGLFQKGYRLFDPSNRKIILSRDVKFDEESLWKWENAREGEMTVLVPTRNQDYALNPDLNAPLQIHEEVIALEEPSQSLDTQTQADGDPTLQDESVEGSSQAIDHTPKKWKSINDIMAQCNMCIMEPENFEEA 277
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Match: A0A4Y1QXZ7_PRUDU (Multidrug resistance-associated protein 9 OS=Prunus dulcis OX=3755 GN=Prudu_005624 PE=4 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.940e-73
Identity = 131/208 (62.98%), Postives = 150/208 (72.12%), Query Frame = 0 
Query:  138 IFYEAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQMASCS---EGHKQFEVC-----EPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKWRSINEIMAQCNMCIVEPESYEEAALDES 328
             + EAVNTAVY+LNRCP+KSL KVTPFEAYTGRKPGIAHLKIFGS C+V +PS LRH         I VGYGLCEK Y++FDPSS K+ILSRDV FDE+  WKWEN  K E+ V M AENQ    S   +   Q +       EPSQ LD STQ+ E    Q E +  +SQAIDHTP KWRS+NEIMAQCN+CIVEPES+E+A LDES
Sbjct:  647 FWAEAVNTAVYLLNRCPTKSLNKVTPFEAYTGRKPGIAHLKIFGSPCHVLIPSALRHKLEENSHKCILVGYGLCEKGYRIFDPSSRKVILSRDVHFDEDGLWKWENEQKGEITVSMPAENQNCEPSLDLDTPLQMDAGTTVQDEPSQDLDASTQMGENNILQEERISGSSQAIDHTPKKWRSVNEIMAQCNICIVEPESFEDANLDES 854

HSP 2 Score: 129.028 bits (323), Expect = 3.262e-29
Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 0 
Query:   55 LNVGGKNPMGG-----VNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIF 139
            ++ G  N M G     V+IQRNL SK+KMGTGE+V VAGKGTLVI+TKLG+KHIQEV LV GLEENLLSVG M+EHGYYLVFGGN+VN++
Sbjct:  328 IDSGCSNHMTGNEGLLVDIQRNLNSKVKMGTGEVVPVAGKGTLVIKTKLGKKHIQEVMLVPGLEENLLSVGQMMEHGYYLVFGGNMVNVY 417

HSP 3 Score: 106.686 bits (265), Expect = 1.436e-21
Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 0 
Query:    1 MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTERAFASLNVGGKNPMGG 65
            +  LP+SYDPICS+IEHSKDLE LEVQEVVASLKSFELRLDRH E+STERAFASLN+  KN   G
Sbjct:  171 LFSLPKSYDPICSVIEHSKDLEILEVQEVVASLKSFELRLDRHTENSTERAFASLNIEEKNSKSG 235
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.336e-14
Identity = 59/165 (35.76%), Postives = 79/165 (47.88%), Query Frame = 0 
Query:  141 EAVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDE-------NASWKWEN-------TDKSEMRVPMFAENQMASCSE-GHKQFEVCEPSQSLDTSTQVDEVITP 281
            EAV TA Y++NR PS  L    P   +T ++   +HLK+FG   + HVP   R          IF+GYG  E  Y+++DP   K+I SRDV+F E       + S K +N       T  S    P  AE+     SE G +  EV E  + LD    V+EV  P
Sbjct:  612 EAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEG--VEEVEHP 774
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 1.589e-13
Identity = 43/129 (33.33%), Postives = 74/129 (57.36%), Query Frame = 0 
Query:  109 VHGLEENLLSVGHMVEHGYYLVFGGNVVNIFY-EAVNTAVYILNRCPSKSL--KKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPS--------TLRHIFVGYGLCEKRYKVFDPSSSKIILSRDVLFDE 226
            ++G+ E ++    + E    +V G  +   F+ EAV TA Y++NR PS++L     TP+E +  +KP + HL++FG+  YVH+ +        + + IFVGY      +K++D  + K I++RDV+ DE
Sbjct:  581 LNGVSERMIRT--ITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYE--PNGFKLWDAVNEKFIVARDVVVDE 705
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy Swiss-Prot
Match: POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.796e-10
Identity = 36/117 (30.77%), Postives = 59/117 (50.43%), Query Frame = 0 
Query:  121 HMVEHGYYLVFGGNVVNIFYE-AVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDEN 227
            H+VE G  L+   ++   ++  A   AVY++NR P+  L+  +PF+   G  P    L++FG  CY  +    +H         +F+GY L +  Y      +S++ +SR V FDEN
Sbjct:  631 HIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDEN 747
[Close]
BLAST of PruarS.5G080900.t1.p1 vs. ExPASy Swiss-Prot
Match: POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.622e-10
Identity = 48/167 (28.74%), Postives = 75/167 (44.91%), Query Frame = 0 
Query:   74 SKLKMGTGEIVQVAGKGTLVIETKLGRKHIQEVT-LVHGLEENLLSVG---HMVEHGYYLVFGGNVVNIFYE-AVNTAVYILNRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRH---------IFVGYGLCEKRYKVFDPSSSKIILSRDVLFDE 226
            ++ +   G +    G   +V+   L +  I   T   H  E N LS     H+VE G  L+   +V   ++  A + AVY++NR P+  L+  +PF+   G+ P    LK+FG  CY  +    RH          F+GY L +  Y      + ++  SR V FDE
Sbjct:  559 NRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDE 725
The following BLAST results are available for this feature:
BLAST of PruarS.5G080900.t1.p1 vs. NCBI nr
Analysis Date: 2021-05-27 (Blastp of Prunus armeniaca cv. Stella v1.0 proteins vs NCBI nr )
Total hits: 10
Match NameE-valueIdentityDescription
gi|1039831643|ref|XP_017190469.1|1.140e-10075.50PREDICTED: uncharacterized protein LOC108174286 [M... [more]
gi|645266426|ref|XP_008238606.1|6.884e-6867.82PREDICTED: uncharacterized protein LOC103337221 [P... [more]
gi|1162511535|ref|XP_020412646.1|5.703e-6462.78uncharacterized protein LOC109947213 [Prunus persi... [more]
gi|1162533979|ref|XP_020415636.1|2.844e-4864.83uncharacterized protein LOC109948114 [Prunus persi... [more]
gi|657979304|ref|XP_008381610.1|3.754e-4646.97PREDICTED: uncharacterized protein LOC103444461 [M... [more]
gi|1039911884|ref|XP_017182205.1|1.455e-4444.65PREDICTED: uncharacterized protein LOC108171073 [M... [more]
gi|1039835841|ref|XP_017191138.1|6.311e-4046.82PREDICTED: uncharacterized protein LOC108174553 [M... [more]
gi|1039928653|ref|XP_017185606.1|5.779e-3843.50PREDICTED: uncharacterized protein LOC108172496 [M... [more]
gi|1079226954|ref|XP_018504975.1|1.214e-3546.01PREDICTED: uncharacterized protein LOC108867808 [P... [more]
gi|1012349801|gb|KYP60991.1|1.280e-3539.51Retrovirus-related Pol polyprotein from transposon... [more]
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BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Analysis Date: 2021-05-27 (Blastp of Prunus armeniaca cv. Stella v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A5H2XQ13_PRUDU5.999e-11349.76Multidrug resistance-associated protein 9 (Fragmen... [more]
A0A5H2XRA8_PRUDU3.763e-8363.00Multidrug resistance-associated protein 9 OS=Prunu... [more]
A0A4Y1QVX1_PRUDU4.912e-8363.00Multidrug resistance-associated protein 9 OS=Prunu... [more]
A0A4Y1RZW2_PRUDU5.405e-8359.57Transposable element protein OS=Prunus dulcis OX=3... [more]
A0A4Y1QPS0_PRUDU9.097e-8163.50Multidrug resistance-associated protein 9 OS=Prunu... [more]
A0A4Y1R5C3_PRUDU2.647e-8063.50Multidrug resistance-associated protein 9 OS=Prunu... [more]
A0A5H2XV89_PRUDU4.972e-7663.50Multidrug resistance-associated protein 9 OS=Prunu... [more]
A0A4Y1RG61_PRUDU5.745e-7560.58Transposable element protein OS=Prunus dulcis OX=3... [more]
A0A4Y1RYV8_PRUDU2.481e-7459.61Transposable element protein OS=Prunus dulcis OX=3... [more]
A0A4Y1QXZ7_PRUDU1.940e-7362.98Multidrug resistance-associated protein 9 OS=Prunu... [more]
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BLAST of PruarS.5G080900.t1.p1 vs. ExPASy TrEMBL
Analysis Date: 2021-05-27 (Blastp of Prunus armeniaca cv. Stella v1.0 proteins vs Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of PruarS.5G080900.t1.p1 vs. ExPASy Swiss-Prot
Analysis Date: 2021-05-27 (Blastp of Prunus armeniaca cv. Stella v1.0 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
POLX_TOBAC9.336e-1435.76Retrovirus-related Pol polyprotein from transposon... [more]
COPIA_DROME1.589e-1333.33Copia protein OS=Drosophila melanogaster OX=7227 G... [more]
POLR1_ARATH1.796e-1030.77Retrovirus-related Pol polyprotein from transposon... [more]
POLR2_ARATH3.622e-1028.74Retrovirus-related Pol polyprotein from transposon... [more]
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InterPro
Analysis Name: InterProScan Analysis for Prunus armeniaca cv. Stella v1.0 proteins
Date Performed: 2021-05-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 127..180

Sequences
The following sequences are available for this feature:

mRNA sequence

>PruarS.5G080900.t1.p1_PruarS_v1.0 ID=PruarS.5G080900.t1.p1_PruarS_v1.0; Name=PruarS.5G080900.t1.p1; organism=Prunus armeniaca; type=mRNA; length=987bp
ATGGTTGATTTGCCTAGATCATATGACCCTATTTGCTCTATGATTGAACA
CTCTAAGGACCTTGAAACTCTTGAGGTTCAAGAGGTAGTTGCTTCTTTGA
AAAGCTTTGAGCTCAGATTGGATAGACATGCTGAAGACTCTACAGAAAGG
GCTTTTGCTAGTCTAAACGTTGGAGGTAAAAATCCTATGGGTGGAGTTAA
CATTCAAAGGAACCTGACTTCCAAGTTGAAGATGGGAACTGGAGAAATTG
TTCAGGTTGCAGGAAAAGGAACTCTTGTGATAGAGACCAAATTGGGAAGG
AAGCACATTCAAGAAGTGACGCTTGTTCATGGACTTGAAGAGAATTTGCT
TAGTGTTGGACATATGGTGGAGCACGGGTACTATCTGGTGTTTGGAGGAA
ATGTCGTAAACATCTTCTATGAGGCTGTGAACACTGCAGTCTACATACTT
AATAGATGTCCCTCCAAGTCTCTCAAGAAGGTAACTCCATTTGAAGCATA
CACTGGCAGAAAACCAGGTATTGCACATCTGAAGATTTTTGGATCACTAT
GCTATGTGCACGTCCCTTCAACACTAAGGCATATCTTTGTGGGTTATGGA
CTCTGTGAAAAAAGGTACAAGGTGTTTGATCCAAGTTCCAGTAAGATCAT
CTTGTCCAGAGATGTACTCTTTGATGAGAATGCTTCATGGAAGTGGGAGA
ACACTGATAAAAGTGAAATGAGAGTCCCAATGTTTGCTGAGAATCAAATG
GCAAGCTGCAGTGAAGGACATAAGCAATTTGAAGTCTGTGAACCAAGTCA
ATCCTTGGATACATCAACTCAAGTGGATGAAGTTATTACACCACAGAGTG
AGGATATGGTTGAAAACTCTCAAGCAATTGATCACACACCACATAAATGG
AGAAGCATCAATGAGATCATGGCTCAGTGTAACATGTGCATTGTAGAACC
TGAGAGCTATGAAGAAGCTGCTCTAGATGAGTCATGA
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protein sequence of PruarS.5G080900.t1.p1_PruarS_v1.0

>PruarS.5G080900.t1.p1_PruarS_v1.0 ID=PruarS.5G080900.t1.p1_PruarS_v1.0; Name=PruarS.5G080900.t1.p1_PruarS_v1.0; organism=Prunus armeniaca; type=polypeptide; length=329bp
MVDLPRSYDPICSMIEHSKDLETLEVQEVVASLKSFELRLDRHAEDSTER
AFASLNVGGKNPMGGVNIQRNLTSKLKMGTGEIVQVAGKGTLVIETKLGR
KHIQEVTLVHGLEENLLSVGHMVEHGYYLVFGGNVVNIFYEAVNTAVYIL
NRCPSKSLKKVTPFEAYTGRKPGIAHLKIFGSLCYVHVPSTLRHIFVGYG
LCEKRYKVFDPSSSKIILSRDVLFDENASWKWENTDKSEMRVPMFAENQM
ASCSEGHKQFEVCEPSQSLDTSTQVDEVITPQSEDMVENSQAIDHTPHKW
RSINEIMAQCNMCIVEPESYEEAALDES*
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mRNA from alignment at chr5:5272028..5274077-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>PruarS.5G080900.t1.p1_PruarS_v1.0 ID=PruarS.5G080900.t1.p1_PruarS_v1.0; Name=PruarS.5G080900.t1.p1; organism=Prunus armeniaca; type=mRNA; length=2050bp; location=Sequence derived from: chr5:5272028..5274077- (Prunus armeniaca
ATGGTTGATTTGCCTAGATCATATGACCCTATTTGCTCTATGATTGAACA
CTCTAAGGACCTTGAAACTCTTGAGGTTCAAGAGGTAGTTGCTTCTTTGA
AAAGCTTTGAGCTCAGATTGGATAGACATGCTGAAGACTCTACAGAAAGG
GCTTTTGCTAGTCTAAACGTTGGAGGTAAAAATCCTATGGGTGGAGGTAA
TTTTGGAAATCAAAAATCTCAGAAAAACTGGAAATCCAAAGGAAAGAAAT
GAGATAATATGCCTAATTCTACTTCCAAACCAAATTTCTCCAATGATGGA
AACAAAACAACTTGTAAACACTGTGATAAACTGCATTATGGCAAGTGTTG
GTTTGAAGGGAAGCCTAAATGCACAAGTTGTGGGAAGTTTGGGCATGTGC
TCAGAGACTGCAATGGAAATAAAACTATACATAAGGTGAACTATGCAAAC
CAGGTTGAAGAAACTAGTACTTTGTTCTATGCATGTAATGATGTGACAAA
TGTGACCATTCATGGACCATTGATAGTGGTTGTAGTAACCACATGACAAG
TGATGAAAAGTTATTAGTTAACATTCAAAGGAACCTGACTTCCAAGTTGA
AGATGGGAACTGGAGAAATTGTTCAGGTTGCAGGAAAAGGAACTCTTGTG
ATAGAGACCAAATTGGGAAGGAAGCACATTCAAGAAGTGACGCTTGTTCA
TGGACTTGAAGAGAATTTGCTTAGTGTTGGACATATGGTGGAGCACGGGT
ACTATCTGGTGTTTGGAGGAAATGTCGTAAACATCTTCTATGGTTGGTCA
CTGAACAATCTTGTTGCTAGAGTTCAAATGACAAACAACATGTTCTTTCC
TCTTACAATGATGCGTGCAAATCAGTTGGCCTTGAAGGCAAGTGTGACAC
ACTATCTGTAGATATGGCACAAGAGATTGAGGCATCTAAATGACAGAAGC
ATCAGACTGCTTGAAGATCAAGAAATGGTTCATGGGTTGCCTCATTTGGA
GAAAACTTATGTTGTGTGTGAAGGTTGCATACTAGGAAAGCAACATAGAG
ATTCTTTTCCATCAAAATCTACTTGGAGAGCTAAATTTCCATTGGAATTG
GTTCACACGGACATCTGTGGACCAATGCAAATTGAATCTATCTCAGGAAA
TAGATACTTTCTGTTGTTCACAAACGATTGCACCAGAATAACATGCGTAT
ACTTTATCAAGAACAAGTCAAATGCATTTGAATGTTTCAAGAAGTTCAAA
GCTATGACTGAACGACAATGTGGATATATGGTGAAAAGCTTAAGGAGTGA
TAGGGGTGGAGAATTTTTGTCAAATGAATTTAACAAGTATTGCAATGAAC
TTGGGATCCAAAGACAATTAACTATGGCATATTCTCCTCAACAGAATGGA
GTGGCTAAGAGGAAGAATAGAACGGTGGTGGAAATGGCAAAATCCATGCT
GCATGAAAAGGTCTTCCTTACAAGTTTTGGGCAGAGGCTGTGAACACTGC
AGTCTACATACTTAATAGATGTCCCTCCAAGTCTCTCAAGAAGGTAACTC
CATTTGAAGCATACACTGGCAGAAAACCAGGTATTGCACATCTGAAGATT
TTTGGATCACTATGCTATGTGCACGTCCCTTCAACACTAAGGCATATCTT
TGTGGGTTATGGACTCTGTGAAAAAAGGTACAAGGTGTTTGATCCAAGTT
CCAGTAAGATCATCTTGTCCAGAGATGTACTCTTTGATGAGAATGCTTCA
TGGAAGTGGGAGAACACTGATAAAAGTGAAATGAGAGTCCCAATGTTTGC
TGAGAATCAAATGGCAAGCTGCAGTGAAGGACATAAGCAATTTGAAGTCT
GTGAACCAAGTCAATCCTTGGATACATCAACTCAAGTGGATGAAGTTATT
ACACCACAGAGTGAGGATATGGTTGAAAACTCTCAAGCAATTGATCACAC
ACCACATAAATGGAGAAGCATCAATGAGATCATGGCTCAGTGTAACATGT
GCATTGTAGAACCTGAGAGCTATGAAGAAGCTGCTCTAGATGAGTCATGA
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Coding sequence (CDS) from alignment at chr5:5272028..5274077-

>PruarS.5G080900.t1.p1_PruarS_v1.0 ID=PruarS.5G080900.t1.p1_PruarS_v1.0; Name=PruarS.5G080900.t1.p1; organism=Prunus armeniaca; type=CDS; length=987bp; location=Sequence derived from: chr5:5272028..5274077- (Prunus armeniaca
ATGGTTGATTTGCCTAGATCATATGACCCTATTTGCTCTATGATTGAACA
CTCTAAGGACCTTGAAACTCTTGAGGTTCAAGAGGTAGTTGCTTCTTTGA
AAAGCTTTGAGCTCAGATTGGATAGACATGCTGAAGACTCTACAGAAAGG
GCTTTTGCTAGTCTAAACGTTGGAGGTAAAAATCCTATGGGTGGAGTTAA
CATTCAAAGGAACCTGACTTCCAAGTTGAAGATGGGAACTGGAGAAATTG
TTCAGGTTGCAGGAAAAGGAACTCTTGTGATAGAGACCAAATTGGGAAGG
AAGCACATTCAAGAAGTGACGCTTGTTCATGGACTTGAAGAGAATTTGCT
TAGTGTTGGACATATGGTGGAGCACGGGTACTATCTGGTGTTTGGAGGAA
ATGTCGTAAACATCTTCTATGAGGCTGTGAACACTGCAGTCTACATACTT
AATAGATGTCCCTCCAAGTCTCTCAAGAAGGTAACTCCATTTGAAGCATA
CACTGGCAGAAAACCAGGTATTGCACATCTGAAGATTTTTGGATCACTAT
GCTATGTGCACGTCCCTTCAACACTAAGGCATATCTTTGTGGGTTATGGA
CTCTGTGAAAAAAGGTACAAGGTGTTTGATCCAAGTTCCAGTAAGATCAT
CTTGTCCAGAGATGTACTCTTTGATGAGAATGCTTCATGGAAGTGGGAGA
ACACTGATAAAAGTGAAATGAGAGTCCCAATGTTTGCTGAGAATCAAATG
GCAAGCTGCAGTGAAGGACATAAGCAATTTGAAGTCTGTGAACCAAGTCA
ATCCTTGGATACATCAACTCAAGTGGATGAAGTTATTACACCACAGAGTG
AGGATATGGTTGAAAACTCTCAAGCAATTGATCACACACCACATAAATGG
AGAAGCATCAATGAGATCATGGCTCAGTGTAACATGTGCATTGTAGAACC
TGAGAGCTATGAAGAAGCTGCTCTAGATGAGTCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf