FxaC_15g03210.t1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|470125045|ref|XP_004298517.1| (PREDICTED: F-box protein At3g07870-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 201.83 bits (512), Expect = 3.076e-59 Identity = 98/111 (88.29%), Postives = 100/111 (90.09%), Query Frame = 0
Query: 1 MVVDWHHLSFVHPPPSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIRRFKKIIVVDGCLCIVCETGNVWILKDYIHQVWVAETIKLVPHRIFPLPQCAS 111
MVVDW+ LSFVHPP SDFWNSTVCVHGVLHWLAPSDEVIFALDIGDER RIIPVPSHIR KKII VDGCLCIVCETG VWILKDYIHQVWVAETI+ P RIF LPQCAS
Sbjct: 201 MVVDWYDLSFVHPPSSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERFRIIPVPSHIRSSKKIIEVDGCLCIVCETGKVWILKDYIHQVWVAETIEF-PRRIFRLPQCAS 310 HSP 2 Score: 142.895 bits (359), Expect = 1.634e-36 Identity = 94/189 (49.74%), Postives = 113/189 (59.79%), Query Frame = 0
Query: 98 LVPHRIFPLPQCA----------------SHADFCRNSTVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTKDNYLRLYDRKSKSFRQSKIIFPEILRELGFE 270
LV +IF L QC+ +DF NSTVCVHGVL WLA S E I AL+IG+ +R + + + KKIIEVDGCL IVC +WIL DY HQVWVAETI+ P R+ FR LPQC + TGELVF V+KDNYL+LYDRKSKS RQS+IIFP++ +LG
Sbjct: 185 LVGFKIFTLGQCSWRDMVVDWYDLSFVHPPSSDFW-NSTVCVHGVLHWLAPSDEVIFALDIGD---ERFRIIPVPSHIRSS-KKIIEVDGCLCIVC--------ETGKVWILKDYIHQVWVAETIEF----PRRI-FR---LPQCASDTGELVFGVSKDNYLQLYDRKSKSSRQSEIIFPKMFSDLGLR 352
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|764579672|ref|XP_011463716.1| (PREDICTED: putative F-box protein At3g16210 [Fragaria vesca subsp. vesca]) HSP 1 Score: 118.242 bits (295), Expect = 2.486e-27 Identity = 70/126 (55.56%), Postives = 83/126 (65.87%), Query Frame = 0
Query: 1 MVVDWHHLSFVHPPPSDFWNSTVCVHGVLHWL--APSDEVIFALDIGDERLRIIPVPS--HIRRFKKIIVVDGCLCIVCETGN--------VWILKDYIHQVWVAETIK---LVPHRIFPLPQCAS 111
MVVDWHHLSFVHPPPS+F S VCV+GVL+WL PS + I ALDIGDER IIPVPS + + K++ VDGCL IV N + ILKDY HQVWV E I L +R+ PLP+C +
Sbjct: 187 MVVDWHHLSFVHPPPSNFRKS-VCVNGVLYWLLSLPSHKAILALDIGDERFGIIPVPSRCYFEGYIKLMEVDGCLYIVIGDYNKMAKEEVMLLILKDYKHQVWVTEIINPSLLWGYRVTPLPRCTT 311 HSP 2 Score: 114.39 bits (285), Expect = 8.424e-26 Identity = 78/153 (50.98%), Postives = 100/153 (65.36%), Query Frame = 0
Query: 120 TVCVHGVLQWLAT--SHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTG-ELVFEVTKDNYLRLYDRKSKSFRQSKIIFPEILRELGF 269
+VCV+GVL WL + SH+AILAL+IG+ + + C Y K++EVDGCL IV GDY ++L IL DYKHQVWV E I YR+ + LP+CTT TG E VF+V+K+NYL+ YDRKSK R+SKIIFP +LR+LG
Sbjct: 207 SVCVNGVLYWLLSLPSHKAILALDIGDE-RFGIIPVPSRCYFEG-YIKLMEVDGCLYIVIGDYNKMAKEEVMLLILKDYKHQVWVTEIINPSLLWGYRV----TPLPRCTTRTGDEFVFDVSKNNYLKFYDRKSKKSRRSKIIFPIMLRDLGL 353
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|657986496|ref|XP_008385376.1| (PREDICTED: F-box protein At1g30790-like [Malus domestica]) HSP 1 Score: 85.8853 bits (211), Expect = 2.133e-15 Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNY----CKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTK-----DNYLR--LYDRKSKSFRQSKIIFPEILR 265
+V V+G + W+ + ++ +I + NY K N Y I+EV GCL ++ GD + +++ LWIL DY++QVWV ET + P+ +P C+ HTGEL+ + +K N++R LY+ KSKSFR+S+I+ P R
Sbjct: 228 SVSVNGAIHWMHDTQNILVVFDIADEKFKVITJPHNYNCAIXKFNFAYGNIVEVFGCLALI-GDEQLTQQNMMGLWILKDYENQVWVKETFRF----PFVWSEFGYPVPFCSIHTGELILQSSKLSRQHPNHVRLHLYNMKSKSFRESEIVLPSEWR 379
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|694439360|ref|XP_009346573.1| (PREDICTED: F-box protein At1g30790-like [Pyrus x bretschneideri]) HSP 1 Score: 83.9593 bits (206), Expect = 8.999e-15 Identity = 53/162 (32.72%), Postives = 87/162 (53.70%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC----KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTK-----DNYLR--LYDRKSKSFRQSKIIFPEILRELGFE 270
V V+G + W+ + ++ +I + + +Y K N + I+EV GCL ++ GD + +++ LWIL DY++QVWV ET + P+ +P C+ HTGEL+ + +K N++R LY+ KSKSFR+S+I+ P E GF+
Sbjct: 215 NVSVNGAIHWMHDTQNILVVFDIADEKFRTIPLPRDYNCAIHKFNFAHGNIVEVFGCLALI-GDEQLTQQNMMGLWILRDYENQVWVKETFRF----PFVWNELGYPVPFCSIHTGELLLQSSKLSRQHPNHVRLHLYNMKSKSFRESEIVLPS---EWGFQ 368
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|1220046505|ref|XP_021809186.1| (F-box protein At1g30790-like [Prunus avium]) HSP 1 Score: 77.7962 bits (190), Expect = 1.109e-12 Identity = 54/150 (36.00%), Postives = 80/150 (53.33%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVT-----KDNYLR--LYDRKSKSFRQ-SKIIFP 261
++CV+GV+ WL + IL +I E + Y +Y + II VDG L +V D + ++ LWIL DY++QVW+ ETI + P+ R LP CT HTGEL+F+ + Y+R LY+ K+ SFR +I+ P
Sbjct: 224 SLCVNGVIHWLHATQNVILVFDIVEEKFRAIPYPKDYNCFLHLVSYIIGVDGRLALV-ADEQLMGQDLMGLWILRDYQNQVWLKETITL----PFVWREVGYPLPCCTIHTGELLFQSSGLSRHHPAYMREHLYNMKTASFRAIDEIVLP 368
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|1220046517|ref|XP_021809194.1| (F-box protein At1g30790-like [Prunus avium]) HSP 1 Score: 77.0258 bits (188), Expect = 2.336e-12 Identity = 50/154 (32.47%), Postives = 83/154 (53.90%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC----KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTKDNYLR-------LYDRKSKSFRQS-KIIFP 261
+VCV+G + W+ + I+ +IG+ + +Y +++ I+EVDGC+ ++ GD + +I LWIL DY++QVWV ETI P+ +P CT HTGEL+ ++ + + LY+ +SKSFR+S +I+ P
Sbjct: 224 SVCVNGAVHWMHWTENVIVVFDIGDEKFKAIPLPEDYNCFIHRVDYPIGSIVEVDGCVALI-GDKRLMRMGMIGLWILRDYQNQVWVKETISF----PFHWEKAGYPVPFCTIHTGELLLHSSRLSRHKPAHPRVLLYNMESKSFRESDEIVLP 372 HSP 2 Score: 70.8626 bits (172), Expect = 3.159e-10 Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 0
Query: 3 VDWHHLSFVHPPPSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIRRF--------KKIIVVDGCLCIVCETG-------NVWILKDYIHQVWVAETIKLVPH---RIFPLPQCASHA 113
VD + L F P F +VCV+G +HW+ ++ VI DIGDE+ + IP+P F I+ VDGC+ ++ + +WIL+DY +QVWV ETI H +P+P C H
Sbjct: 206 VDLNDLPF-DPLNCPFHKRSVCVNGAVHWMHWTENVIVVFDIGDEKFKAIPLPEDYNCFIHRVDYPIGSIVEVDGCVALIGDKRLMRMGMIGLWILRDYQNQVWVKETISFPFHWEKAGYPVPFCTIHT 333
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|657979557|ref|XP_008381745.1| (PREDICTED: putative F-box protein At1g47790 [Malus domestica]) HSP 1 Score: 76.6406 bits (187), Expect = 2.867e-12 Identity = 49/169 (28.99%), Postives = 75/169 (44.38%), Query Frame = 0
Query: 99 VPHRIFPLPQCASHADFCRNSTVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIV--CGDYGIDVNHVIVLWILTDYKHQVWVAETIKVD-PYGPYRLRFRSSYLPQCTTHTGELVFE--VTKDNYLRLYDRKSKSFRQSKIIFPE 262
V H P H D +VC+HG + W+ + I+ ++GE+ + C + + + +++V GCL + G + LWIL DY++QVWV E V PY C HTGE++ + +L YD K +SFR S I+ PE
Sbjct: 231 VEHDDLPFDHTFWHIDM---RSVCLHGAIHWIHEEEKCIVVFDLGEQRFKVIPFPREVCSIRHHFWAVVDVGGCLALTYDMGRSSTSCSAASQLWILKDYQNQVWVKEVFDVAYPYSCL-----------CAFHTGEVLIKSGALSQAFLHFYDMKDQSFRCSSIVVPE 385
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|470119779|ref|XP_004295988.1| (PREDICTED: putative F-box protein At1g47790 [Fragaria vesca subsp. vesca]) HSP 1 Score: 75.8702 bits (185), Expect = 4.770e-12 Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNY----CKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEV-------TKDNYLRLYDRKSKSFRQSKIIFPE 262
+VC+HG L WL + + I+ ++ + + +Y + + I+EV GCL ++ D ++ LWIL DY++QVWV ETI + FR +P T HTGEL+F+ + + + LY+ KSKSFR +II PE
Sbjct: 204 SVCIHGALHWLHGTQDLIVVFDLKDERFRVIPFPKDYNYHTVYFSPTFGSIVEVGGCLALI--DDKESNQSMLRLWILKDYQNQVWVTETIIFPSL--WESTFRP--VPFGTIHTGELLFQSPALVKLESSNVRVLLYNMKSKSFRTIEIILPE 351 HSP 2 Score: 72.0182 bits (175), Expect = 1.056e-10 Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 0
Query: 17 DFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIR--------RFKKIIVVDGCLCIVCETGN------VWILKDYIHQVWVAETI 96
F +VC+HG LHWL + ++I D+ DER R+IP P F I+ V GCL ++ + + +WILKDY +QVWV ETI
Sbjct: 199 QFHRRSVCIHGALHWLHGTQDLIVVFDLKDERFRVIPFPKDYNYHTVYFSPTFGSIVEVGGCLALIDDKESNQSMLRLWILKDYQNQVWVTETI 292
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|1027089240|ref|XP_016649653.1| (PREDICTED: LOW QUALITY PROTEIN: F-box protein At1g30790-like [Prunus mume]) HSP 1 Score: 75.485 bits (184), Expect = 7.068e-12 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC----KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFE-----VTKDNYLR--LYDRKSKSFRQS-KIIFP 261
+VCV+G + W+ + ILA IG+ + +Y +++ + I+EVDGC+ + GD + +++ LW+L DY++QVWV ETI Y P +P C HTGEL+ + + K + R LY+ +S SFR S +I+ P
Sbjct: 224 SVCVNGAVHWIHGINNVILAFGIGDEKFRAIPLPKDYNCFTHRIDFPIESIVEVDGCVALT-GDKELMRLNILRLWVLEDYQNQVWVKETI----YFPLHWEEAGYPVPFCAIHTGELLLQSSRLSIQKPGHPRVLLYNMESASFRGSDEIVLP 372 HSP 2 Score: 73.1738 bits (178), Expect = 4.067e-11 Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 0
Query: 11 VHPPPSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIRRF--------KKIIVVDGCLCIVCETG-------NVWILKDYIHQVWVAETIKLVPH---RIFPLPQCASHA 113
++P S F +VCV+G +HW+ + VI A IGDE+ R IP+P F + I+ VDGC+ + + +W+L+DY +QVWV ETI H +P+P CA H
Sbjct: 213 INPFTSPFHKRSVCVNGAVHWIHGINNVILAFGIGDEKFRAIPLPKDYNCFTHRIDFPIESIVEVDGCVALTGDKELMRLNILRLWVLEDYQNQVWVKETIYFPLHWEEAGYPVPFCAIHT 333
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Match: gi|694439363|ref|XP_009346574.1| (PREDICTED: putative F-box protein At5g62660 [Pyrus x bretschneideri]) HSP 1 Score: 72.7886 bits (177), Expect = 6.242e-11 Identity = 43/159 (27.04%), Postives = 77/159 (48.43%), Query Frame = 0
Query: 119 STVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC--------KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTK------DNYLR--LYDRKSKSFRQSKIIFP 261
+VC+ G + W+ + ++ +IG+ +Y + + ++EV GCL ++ + +++ LWIL DY++QVW+ E I P R R +P T H GEL+ + T+ +++R +Y+ +SKSFR S+I P
Sbjct: 225 QSVCISGAMHWMHLKEKVVVVFDIGDEKFRVIPLPQDYVCFIHRIGYPMGESMRNVVEVGGCLALIGDKTLVRSQNMMALWILKDYENQVWIREAITF----PLRWRALGCPVPLRTIHNGELLLQSTELHVHEPPDHVRVHVYNMESKSFRGSEIGLP 379
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A540LWI8_MALBA (FBA_3 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_023562 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.545e-16 Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC----KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTKD-----NYLR--LYDRKSKSFRQSKIIFPEILR 265
+V V+G + W+ + ++ +I + NY K N Y I+EV GCL ++ GD + +++ LWIL DY++QVWV ET + P+ +P C+ HTGEL+ + +K N++R LY+ KSKSFR+S+I+ P R
Sbjct: 232 SVSVNGAIHWMHDTQNILVVFDIADEKFRVITLPQNYNCAIHKFNFAYGNIVEVFGCLALI-GDEQLTQQNMMGLWILKDYENQVWVKETFRF----PFVWSELGYPVPFCSIHTGELILQSSKSSRQHPNHVRLHLYNMKSKSFRESEIVLPSEWR 383 HSP 2 Score: 63.5438 bits (153), Expect = 1.066e-7 Identity = 36/114 (31.58%), Postives = 58/114 (50.88%), Query Frame = 0
Query: 18 FWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSH----IRRFK----KIIVVDGCLCIVCETG-------NVWILKDYIHQVWVAETIKLV---PHRIFPLPQCASHA 113
F +V V+G +HW+ + ++ DI DE+ R+I +P + I +F I+ V GCL ++ + +WILKDY +QVWV ET + +P+P C+ H
Sbjct: 228 FHRRSVSVNGAIHWMHDTQNILVVFDIADEKFRVITLPQNYNCAIHKFNFAYGNIVEVFGCLALIGDEQLTQQNMMGLWILKDYENQVWVKETFRFPFVWSELGYPVPFCSIHT 341
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A498IKL3_MALDO (tRNA-intron lyase OS=Malus domestica OX=3750 GN=DVH24_005992 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.541e-15 Identity = 59/171 (34.50%), Postives = 89/171 (52.05%), Query Frame = 0
Query: 106 LPQCASHADFCRNSTVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC----KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTK-----DNYLR--LYDRKSKSFRQSKIIFPEILR 265
LP S F R S V V+G + W+ + ++ +I + NY K N Y I+EV GCL ++ GD + +++ LWIL DY++QVWV ET + P+ +P C+ HTGEL+ + +K N++R LY+ KSKSFR+S+I+ P R
Sbjct: 1126 LPFDPSKCPFHRRS-VSVNGAIHWMHDTQNILVVFDIADEKFKVITLPHNYNCAIHKFNFAYGNIVEVFGCLALI-GDEQLTQQNMMGLWILKDYENQVWVKETFRF----PFVWSEFGYPVPFCSIHTGELILQSSKLSRQHPNHVRLHLYNMKSKSFRESEIVLPSEWR 1290 HSP 2 Score: 70.0922 bits (170), Expect = 1.123e-9 Identity = 43/160 (26.88%), Postives = 75/160 (46.88%), Query Frame = 0
Query: 119 STVCVHGVLQWLATSHEAILALEIGERGSH---------SYRYLLNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGEL--------VFEVTKDNYLRLYDRKSKSFRQSKIIFP 261
+VC++G + W+ ++ +IG+ S+ + + Y + + + ++EV GCL ++ + +++ LWIL DY++QVW+ E I P R R +P T H GEL V E + +Y+ +S SFR S+I P
Sbjct: 740 QSVCINGAMHWMHLKENVVVVFDIGDEKFRVIPLPQDYVSFIHRIGY-PMGDAMRNVVEVGGCLALIGDKKLVRSQNMMALWILKDYENQVWIREAITF----PLRWRALGCPVPLRTIHNGELLLQSIELHVHEAPDHVRVHVYNMESNSFRGSEIGLP 894 HSP 3 Score: 66.2402 bits (160), Expect = 1.729e-8 Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 0
Query: 3 VDWHHLSFVHPPPSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVP----SHIRR--------FKKIIVVDGCLCIVCETGNV--------WILKDYIHQVWVAETIKLVPHRIFPL 106
+D + L F P F +VC++G +HW+ + V+ DIGDE+ R+IP+P S I R + ++ V GCL ++ + V WILKDY +QVW+ E I FPL
Sbjct: 723 IDRNDLPF-EPLKCPFAVQSVCINGAMHWMHLKENVVVVFDIGDEKFRVIPLPQDYVSFIHRIGYPMGDAMRNVVEVGGCLALIGDKKLVRSQNMMALWILKDYENQVWIREAI------TFPL 839 HSP 4 Score: 61.6178 bits (148), Expect = 6.818e-7 Identity = 39/129 (30.23%), Postives = 64/129 (49.61%), Query Frame = 0
Query: 3 VDWHHLSFVHPPPSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSH----IRRFK----KIIVVDGCLCIVCETG-------NVWILKDYIHQVWVAETIKLV---PHRIFPLPQCASHA 113
+D + L F P F +V V+G +HW+ + ++ DI DE+ ++I +P + I +F I+ V GCL ++ + +WILKDY +QVWV ET + +P+P C+ H
Sbjct: 1121 LDLNDLPF-DPSKCPFHRRSVSVNGAIHWMHDTQNILVVFDIADEKFKVITLPHNYNCAIHKFNFAYGNIVEVFGCLALIGDEQLTQQNMMGLWILKDYENQVWVKETFRFPFVWSEFGYPVPFCSIHT 1248 HSP 5 Score: 61.2326 bits (147), Expect = 8.571e-7 Identity = 36/107 (33.64%), Postives = 61/107 (57.01%), Query Frame = 0
Query: 164 KKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVT------KDNYLR--LYDRKSKSFRQSKIIFPE 262
+ ++EVDGCL ++ + + +++ LWIL DY++QVWV +TI + P+ R +P T H GEL+ + T ++R +Y+ +SKSF +S+I P
Sbjct: 2 RNVLEVDGCLALIGDKKLMTLQNMMALWILKDYQNQVWVRKTIIL----PHCWRALGCLVPLHTIHNGELLLQSTVLRVHGPPGHVRVHVYNMESKSFSESEIGVPS 104
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A5N5FUC2_9ROSA (F-box protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_006465 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.052e-14 Identity = 53/162 (32.72%), Postives = 87/162 (53.70%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC----KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTK-----DNYLR--LYDRKSKSFRQSKIIFPEILRELGFE 270
V V+G + W+ + ++ +I + + +Y K N + I+EV GCL ++ GD + +++ LWIL DY++QVWV ET + P+ +P C+ HTGEL+ + +K N++R LY+ KSKSFR+S+I+ P E GF+
Sbjct: 215 NVSVNGAIHWMHDTQNILVVFDIADEKFRTIPLPRDYNCAIHKFNFAHGNIVEVFGCLALI-GDEQLTQQNMMGLWILRDYENQVWVKETFRF----PFVWNELGYPVPFCSIHTGELLLQSSKLSRQHPNHVRLHLYNMKSKSFRESEIVLPS---EWGFQ 368 HSP 2 Score: 62.3882 bits (150), Expect = 2.273e-7 Identity = 36/114 (31.58%), Postives = 56/114 (49.12%), Query Frame = 0
Query: 18 FWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSH----IRRFK----KIIVVDGCLCIVCETG-------NVWILKDYIHQVWVAETIKLV---PHRIFPLPQCASHA 113
F V V+G +HW+ + ++ DI DE+ R IP+P I +F I+ V GCL ++ + +WIL+DY +QVWV ET + +P+P C+ H
Sbjct: 211 FHRRNVSVNGAIHWMHDTQNILVVFDIADEKFRTIPLPRDYNCAIHKFNFAHGNIVEVFGCLALIGDEQLTQQNMMGLWILRDYENQVWVKETFRFPFVWNELGYPVPFCSIHT 324
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A498HLT4_MALDO (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007603 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.350e-12 Identity = 49/169 (28.99%), Postives = 75/169 (44.38%), Query Frame = 0
Query: 99 VPHRIFPLPQCASHADFCRNSTVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIV--CGDYGIDVNHVIVLWILTDYKHQVWVAETIKVD-PYGPYRLRFRSSYLPQCTTHTGELVFE--VTKDNYLRLYDRKSKSFRQSKIIFPE 262
V H P H D +VC+HG + W+ + I+ ++GE+ + C + + + +++V GCL + G + LWIL DY++QVWV E V PY C HTGE++ + +L YD K +SFR S I+ PE
Sbjct: 231 VEHDDLPFDHTFWHIDM---RSVCLHGAIHWIHEEEKCIVVFDLGEQRFKVIPFPREVCSIRHHFWAVVDVGGCLALTYDMGRSSTSCSAASQLWILKDYQNQVWVKEVFDVAYPYSCL-----------CAFHTGEVLIKSGALSQAFLHFYDMKDQSFRCSSIVVPE 385 HSP 2 Score: 63.929 bits (154), Expect = 7.249e-8 Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 0
Query: 18 FWN---STVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHI----RRFKKIIVVDGCLCIVCETG----------NVWILKDYIHQVWVAETIKLV 99
FW+ +VC+HG +HW+ ++ I D+G++R ++IP P + F ++ V GCL + + G +WILKDY +QVWV E +
Sbjct: 242 FWHIDMRSVCLHGAIHWIHEEEKCIVVFDLGEQRFKVIPFPREVCSIRHHFWAVVDVGGCLALTYDMGRSSTSCSAASQLWILKDYQNQVWVKEVFDVA 340
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A314XFR9_PRUYE (F-box protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_21283 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.542e-12 Identity = 53/152 (34.87%), Postives = 80/152 (52.63%), Query Frame = 0
Query: 118 NSTVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTK-----DNYLR--LYDRKSKSFRQ-SKIIFP 261
+ ++CV+GV+ WL + IL +I E + Y +Y + II VDG L +V D + ++ LWIL DY++QVW+ ETI + P+ R LP C HTGEL+F+ + Y+R LY+ K+ SFR +I+ P
Sbjct: 33 SQSLCVNGVIHWLHATQNVILVFDIVEEKFRAIPYPKDYNCFLHLVNYIIGVDGRLALV-ADEQLMGQDLMGLWILRDYQNQVWLKETITL----PFVWREVGYPLP-CIIHTGELLFQSSGLSRHHPAYMREHLYNMKTASFRAIDEIVLP 178 HSP 2 Score: 65.4698 bits (158), Expect = 4.102e-9 Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 15 PSD-----FWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIRRF----KKIIVVDGCLCIVCETG-------NVWILKDYIHQVWVAETIKL 98
PSD F + ++CV+GV+HWL + VI DI +E+ R IP P F II VDG L +V + +WIL+DY +QVW+ ETI L
Sbjct: 23 PSDPLKCPFDSQSLCVNGVIHWLHATQNVILVFDIVEEKFRAIPYPKDYNCFLHLVNYIIGVDGRLALVADEQLMGQDLMGLWILRDYQNQVWLKETITL 122
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A498I6U7_MALDO (FBA_3 domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_040303 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 8.699e-12 Identity = 45/151 (29.80%), Postives = 76/151 (50.33%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHV--IVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQ--CTTHTGELVFE--VTKDNYLRLYDRKSKSFRQSKIIFPEIL 264
+VC+HG + W + ++ ++GE+ + + ++ + I++V GCL + +++ + LWIL DY+ QVWV E V Y L ++Y C HTGE++ E +L YD K++SFR+S I+ PE L
Sbjct: 249 SVCLHGAIHWTHDEEKCVVVYDLGEQRFRVIPFPPEFDGNSHHFWAIVDVGGCLALTYDKETTSTSYLAGLELWILKDYQDQVWVKEVFAVT----YSLHSFTTYPYSCLCAIHTGEILIESGALSQAFLHFYDMKNQSFRESSIVVPEWL 395
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A540LVB5_MALBA (FBA_3 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_023983 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.318e-11 Identity = 44/149 (29.53%), Postives = 75/149 (50.34%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHV--IVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQ--CTTHTGELVFE--VTKDNYLRLYDRKSKSFRQSKIIFPE 262
+VC+HG + W + ++ ++GE+ + + ++ + I++V GCL + +++ + LWIL DY+ QVWV E V Y L ++Y C HTGE++ E +L YD K++SFR+S I+ PE
Sbjct: 249 SVCLHGAIHWTHDEEKCVVVYDLGEQRFRVIPFPPEFDGNSHHFWAIVDVGGCLALTYDKETTSTSYLAGLELWILKDYQDQVWVKEVFAVT----YSLHSFTTYPYSCLCAIHTGEILIESGALSQAFLHFYDMKNQSFRESSIVVPE 393
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A314XKF2_PRUYE (F-box protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_21281 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.492e-11 Identity = 49/154 (31.82%), Postives = 83/154 (53.90%), Query Frame = 0
Query: 120 TVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNYC----KLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVTKDNYLR-------LYDRKSKSFRQS-KIIFP 261
+VCV+G + W+ + I+ +IG+ + +Y +++ I+EVDGC+ ++ GD + +I LWIL DY++QVWV ETI P+ +P CT HTGEL+ ++ + + LY+ +S+SFR+S +I+ P
Sbjct: 224 SVCVNGAVHWMHWTENVIVVFDIGDEKFKAIPLPEDYNCFIHRVDYPVGSIVEVDGCVALI-GDKRLMRMGMIGLWILRDYQNQVWVKETICF----PFHWEKAGYPVPFCTIHTGELLLHSSRLSRRKPAHPRALLYNMESESFRESDEIVLP 372 HSP 2 Score: 69.3218 bits (168), Expect = 1.243e-9 Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 0
Query: 3 VDWHHLSFVHPPPSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIRRF--------KKIIVVDGCLCIVCETG-------NVWILKDYIHQVWVAETIKLVPH---RIFPLPQCASHA 113
VD + L F P F +VCV+G +HW+ ++ VI DIGDE+ + IP+P F I+ VDGC+ ++ + +WIL+DY +QVWV ETI H +P+P C H
Sbjct: 206 VDLNDLPF-DPLNCPFHKRSVCVNGAVHWMHWTENVIVVFDIGDEKFKAIPLPEDYNCFIHRVDYPVGSIVEVDGCVALIGDKRLMRMGMIGLWILRDYQNQVWVKETICFPFHWEKAGYPVPFCTIHT 333
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A540LWX6_MALBA (F-box domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_023565 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.913e-11 Identity = 44/157 (28.03%), Postives = 79/157 (50.32%), Query Frame = 0
Query: 119 STVCVHGVLQWLATSHEAILALEIGERGSHSYRYLLNY-----CKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVFEVT------KDNYLR--LYDRKSKSFRQSKIIFPE 262
VC++G + W+ ++ +IG+ + +Y C + ++EVDGCL ++ + + +++ LWIL DY++QVWV +TI + P+ R +P T H GEL+ + T ++R +Y+ +SKSF +S+I P
Sbjct: 225 QAVCINGAIHWMHWKENVVVVFDIGDEKFRVIPFHQDYICFIHCIFGEVMRNVLEVDGCLALIGDKKLMILQNMMALWILKDYQNQVWVRKTIML----PHCWRALGCLVPLRTIHNGELLLQSTVLRVHGPPGHVRVHVYNMESKSFSESEIGLPS 377 HSP 2 Score: 64.3142 bits (155), Expect = 4.728e-8 Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 0
Query: 3 VDWHHLSFVHPPPSDFWNSTVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIRRF---------KKIIVVDGCLCIVCETG--------NVWILKDYIHQVWVAETIKLVPH 101
VD + L+F P F VC++G +HW+ + V+ DIGDE+ R+IP F + ++ VDGCL ++ + +WILKDY +QVWV +TI ++PH
Sbjct: 208 VDLNDLAF-DPLECPFKVQAVCINGAIHWMHWKENVVVVFDIGDEKFRVIPFHQDYICFIHCIFGEVMRNVLEVDGCLALIGDKKLMILQNMMALWILKDYQNQVWVRKTI-MLPH 321
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Match: A0A5J5ATR7_9ASTE (FBA_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_033076 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.630e-11 Identity = 49/168 (29.17%), Postives = 89/168 (52.98%), Query Frame = 0
Query: 103 IFPLPQCASHADFCRNSTVCVHGVLQWLATSHEAILALEIGERGSHSYRYL-LNYCKLNNKYKKIIEVDGCLGIVCGDYGIDVNHVIVLWILTDYKHQVWVAETIKVDPYGPYRLRFRSSYLPQCTTHTGELVF---EVTKDN-YLRLYDRKSKSFRQSKI-IFPEIL 264
+FP F +VCV+G + WL S I A ++ E S+R + L + + + +I+++G L ++C +++ +W+L DY+++VW+AE+I + P S P+ T HTGE++ +++D ++ YD K+ SFR +I +FPE+L
Sbjct: 77 VFPFDIKGRDWLFGSKYSVCVNGAIHWLIQSENFIAAFDLRE---ESFRIMPLPHATIPSGKLYMIQINGLLAVIC-------PNMMEMWVLEDYENRVWIAESI-IFP--------SSCAFPRGTIHTGEILLTPQRISRDGVFIPFYDMKNGSFRIVEITLFPELL 225 HSP 2 Score: 64.3142 bits (155), Expect = 2.614e-8 Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 0
Query: 22 TVCVHGVLHWLAPSDEVIFALDIGDERLRIIPVPSHIRRFKKI--IVVDGCLCIVC-ETGNVWILKDYIHQVWVAETIKLVPHRIFP 105
+VCV+G +HWL S+ I A D+ +E RI+P+P K+ I ++G L ++C +W+L+DY ++VW+AE+I FP
Sbjct: 94 SVCVNGAIHWLIQSENFIAAFDLREESFRIMPLPHATIPSGKLYMIQINGLLAVICPNMMEMWVLEDYENRVWIAESIIFPSSCAFP 180 The following BLAST results are available for this feature:
BLAST of FxaC_15g03210.t1 vs. NCBI nr
Analysis Date: 2021-02-18 (Blastp of Fragaria x ananassa Camarosa v1.0.a2 proteins vs NCBI nr) Total hits: 10
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Analysis Date: 2021-03-01 (Blastp of Fragaria x ananassa Camarosa v1.0.a2 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Analysis Date: 2021-03-01 (Blastp of Fragaria x ananassa Camarosa v1.0.a2 proteins vs UniProt Swissprot) Total hits: 0
BLAST of FxaC_15g03210.t1 vs. ExPASy TrEMBL
Analysis Date: 2021-03-01 (Blastp of Fragaria x ananassa Camarosa v1.0.a2 proteins vs Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Fragaria x ananassa Camarosa v1.0.a2 proteins
Date Performed: 2021-02-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >FxaC_15g03210.t1_v1.a2 ID=FxaC_15g03210.t1_v1.a2; Name=FxaC_15g03210.t1; organism=Fragaria x ananassa; type=mRNA; length=831bpback to top mRNA from alignment at Fvb4-2:1530847..1532650- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>FxaC_15g03210.t1_v1.a2 ID=FxaC_15g03210.t1_v1.a2; Name=FxaC_15g03210.t1; organism=Fragaria x ananassa; type=mRNA; length=1804bp; location=Sequence derived from: Fvb4-2:1530847..1532650- (Fragaria x ananassaback to top Coding sequence (CDS) from alignment at Fvb4-2:1530847..1532650- >FxaC_15g03210.t1_v1.a2 ID=FxaC_15g03210.t1_v1.a2; Name=FxaC_15g03210.t1; organism=Fragaria x ananassa; type=CDS; length=831bp; location=Sequence derived from: Fvb4-2:1530847..1532650- (Fragaria x ananassaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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