CDPK, EF519915.1-CDPK.m1 (mRNA) Malus hupehensis

Transcript Overview


Name	CDPK
Unique Name	EF519915.1-CDPK.m1
Type	mRNA
Organism	Malus hupehensis ()
Source	genbank
Product	calcium-dependent calmodulin-independent protein kinase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EF519915.1-CDPK.m1-cds1	EF519915.1-CDPK.m1-cds1	Malus hupehensis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CDPK	EF519915.1-CDPK.p1	Malus hupehensis	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	154968281
nuccore	EF519915.1

Alignments

Feature Name	Type	Location	Analysis
EF519915	region	EF519915:1..1701+	NCBI Rosaceae gene and mRNA sequences
Chr02	chromosome	Chr02:30964904..30970801+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr2	chromosome	chr2:29570514..29576411+	Malus x domestica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at EF519915:1..1701+
coding sequence from alignment at EF519915:1..1701+

mRNA sequence

>EF519915.1-CDPK.m1 ID=EF519915.1-CDPK.m1; Name=CDPK; organism=Malus hupehensis; type=mRNA; length=1701bp
atgggtaatacttgtgttggacctagcatttccaagaatggtttcttcca
atcagtttcagctgtaatgtggccaaaccggtcgcctgatgactcagttc
acacaaacggagaagctgtcgctgagacatcatcacctaaggaacctgag
tcacctatgccagtactagacaaaccaccagagcaagtgacaataccaaa
tccagaaaccgagccaaaacaatccgcaaaacccaagaagctaccacaga
tgaagagggtccctagtgcaggactcgctggttcggtgttgcaaacgaaa
actggaaagttaaaggagttttacagtttggggagaaaactaggacaagg
gcagtttggaattacgtttctgtgtgtggagaaggcgacagggaaagagt
atgcgtgcaaatcgattgcaaaaaggaagttaataactgatgaggatgtg
gaggatgtgaggagggaaattcagatcatgcaccatttggcagggcaccc
aaatgttatatctattaagggagcttatgaggatgctatagcagttcatg
ttgtaatggaattatgtgcaggaggtgagctgtttgataggattatccag
cgtgggcattatacagaaagaaaggcagctgagctaactaggactatagt
tggagttgtcgaagcttgccattcattgggagttatgcatcgagacctta
agccggagaattttctttttgtcagtcaggatgaggatgcactactgaaa
actattgattttggattatctattttcttgaagccaggagtaaaatttac
tgatgtggttggaagtccatattatgttgcacctgaagtgttacgcaagc
gttatggtccagaagcagatgtctggagtgcaggagtaatcctttacatt
ctgttaagtggggtacctccattttgggctgaaggtgagcacggaatatt
tgaacaggtcctgcatggtgacttagattttgaatcagacccttggccta
gtatttctgatggtgccaaagatttagtgaggagaatgcttgtccgagac
cctaaaaggcggctgacagcacatgaagttttgtgccacccctgggtgca
agttgatggtgtggctcccgataaggctcttgattctgcagttctaagtc
gcttaaaacaattttcagctatgaacaagctcaagaaaatggctctcaga
gtaattgcagagaggttgtctgaagaagaaatagctggcctgaaagaaat
gttcaagatgatagacactgacaacagtggtcaaatcacttttgacgaac
tcaaggccggattgaaaagatttggagcaactctggaggagtctgaaatt
tatgatctaatgcaagcagcagatgtcgataacagtggaaccattgatta
tggggagttcgtagctgcaacattgcatctgaacaaaattgagagagaag
atcatctattttcagctttctcctactttgataaggatggaagtggctat
attacttcagatgagcttcaagtagcttgtgaggagtttggcatagagga
tgttcggctcgaagagatgataagagaagttgatcaggacaatgatggac
gcatagattacaacgagtttgtagccatgatgcagaaaggaaattttgtt
ggcccgggtaagaagggattgcaaagtagcttcagcattgcctttagata
a

protein sequence of CDPK

>EF519915.1-CDPK.p1 ID=EF519915.1-CDPK.p1; Name=CDPK; organism=Malus hupehensis; type=polypeptide; length=566bp
MGNTCVGPSISKNGFFQSVSAVMWPNRSPDDSVHTNGEAVAETSSPKEPE
SPMPVLDKPPEQVTIPNPETEPKQSAKPKKLPQMKRVPSAGLAGSVLQTK
TGKLKEFYSLGRKLGQGQFGITFLCVEKATGKEYACKSIAKRKLITDEDV
EDVRREIQIMHHLAGHPNVISIKGAYEDAIAVHVVMELCAGGELFDRIIQ
RGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSQDEDALLK
TIDFGLSIFLKPGVKFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYI
LLSGVPPFWAEGEHGIFEQVLHGDLDFESDPWPSISDGAKDLVRRMLVRD
PKRRLTAHEVLCHPWVQVDGVAPDKALDSAVLSRLKQFSAMNKLKKMALR
VIAERLSEEEIAGLKEMFKMIDTDNSGQITFDELKAGLKRFGATLEESEI
YDLMQAADVDNSGTIDYGEFVAATLHLNKIEREDHLFSAFSYFDKDGSGY
ITSDELQVACEEFGIEDVRLEEMIREVDQDNDGRIDYNEFVAMMQKGNFV
GPGKKGLQSSFSIAFR

mRNA from alignment at EF519915:1..1701+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EF519915.1-CDPK.m1 ID=EF519915.1-CDPK.m1; Name=CDPK; organism=Malus hupehensis; type=mRNA; length=1701bp; location=Sequence derived from: EF519915:1..1701+ (Malus hupehensis
atgggtaatacttgtgttggacctagcatttccaagaatggtttcttcca
atcagtttcagctgtaatgtggccaaaccggtcgcctgatgactcagttc
acacaaacggagaagctgtcgctgagacatcatcacctaaggaacctgag
tcacctatgccagtactagacaaaccaccagagcaagtgacaataccaaa
tccagaaaccgagccaaaacaatccgcaaaacccaagaagctaccacaga
tgaagagggtccctagtgcaggactcgctggttcggtgttgcaaacgaaa
actggaaagttaaaggagttttacagtttggggagaaaactaggacaagg
gcagtttggaattacgtttctgtgtgtggagaaggcgacagggaaagagt
atgcgtgcaaatcgattgcaaaaaggaagttaataactgatgaggatgtg
gaggatgtgaggagggaaattcagatcatgcaccatttggcagggcaccc
aaatgttatatctattaagggagcttatgaggatgctatagcagttcatg
ttgtaatggaattatgtgcaggaggtgagctgtttgataggattatccag
cgtgggcattatacagaaagaaaggcagctgagctaactaggactatagt
tggagttgtcgaagcttgccattcattgggagttatgcatcgagacctta
agccggagaattttctttttgtcagtcaggatgaggatgcactactgaaa
actattgattttggattatctattttcttgaagccaggagtaaaatttac
tgatgtggttggaagtccatattatgttgcacctgaagtgttacgcaagc
gttatggtccagaagcagatgtctggagtgcaggagtaatcctttacatt
ctgttaagtggggtacctccattttgggctgaaggtgagcacggaatatt
tgaacaggtcctgcatggtgacttagattttgaatcagacccttggccta
gtatttctgatggtgccaaagatttagtgaggagaatgcttgtccgagac
cctaaaaggcggctgacagcacatgaagttttgtgccacccctgggtgca
agttgatggtgtggctcccgataaggctcttgattctgcagttctaagtc
gcttaaaacaattttcagctatgaacaagctcaagaaaatggctctcaga
gtaattgcagagaggttgtctgaagaagaaatagctggcctgaaagaaat
gttcaagatgatagacactgacaacagtggtcaaatcacttttgacgaac
tcaaggccggattgaaaagatttggagcaactctggaggagtctgaaatt
tatgatctaatgcaagcagcagatgtcgataacagtggaaccattgatta
tggggagttcgtagctgcaacattgcatctgaacaaaattgagagagaag
atcatctattttcagctttctcctactttgataaggatggaagtggctat
attacttcagatgagcttcaagtagcttgtgaggagtttggcatagagga
tgttcggctcgaagagatgataagagaagttgatcaggacaatgatggac
gcatagattacaacgagtttgtagccatgatgcagaaaggaaattttgtt
ggcccgggtaagaagggattgcaaagtagcttcagcattgcctttagata
a

Coding sequence (CDS) from alignment at EF519915:1..1701+

>EF519915.1-CDPK.m1 ID=EF519915.1-CDPK.m1; Name=CDPK; organism=Malus hupehensis; type=CDS; length=1701bp; location=Sequence derived from: EF519915:1..1701+ (Malus hupehensis
atgggtaatacttgtgttggacctagcatttccaagaatggtttcttcca
atcagtttcagctgtaatgtggccaaaccggtcgcctgatgactcagttc
acacaaacggagaagctgtcgctgagacatcatcacctaaggaacctgag
tcacctatgccagtactagacaaaccaccagagcaagtgacaataccaaa
tccagaaaccgagccaaaacaatccgcaaaacccaagaagctaccacaga
tgaagagggtccctagtgcaggactcgctggttcggtgttgcaaacgaaa
actggaaagttaaaggagttttacagtttggggagaaaactaggacaagg
gcagtttggaattacgtttctgtgtgtggagaaggcgacagggaaagagt
atgcgtgcaaatcgattgcaaaaaggaagttaataactgatgaggatgtg
gaggatgtgaggagggaaattcagatcatgcaccatttggcagggcaccc
aaatgttatatctattaagggagcttatgaggatgctatagcagttcatg
ttgtaatggaattatgtgcaggaggtgagctgtttgataggattatccag
cgtgggcattatacagaaagaaaggcagctgagctaactaggactatagt
tggagttgtcgaagcttgccattcattgggagttatgcatcgagacctta
agccggagaattttctttttgtcagtcaggatgaggatgcactactgaaa
actattgattttggattatctattttcttgaagccaggagtaaaatttac
tgatgtggttggaagtccatattatgttgcacctgaagtgttacgcaagc
gttatggtccagaagcagatgtctggagtgcaggagtaatcctttacatt
ctgttaagtggggtacctccattttgggctgaaggtgagcacggaatatt
tgaacaggtcctgcatggtgacttagattttgaatcagacccttggccta
gtatttctgatggtgccaaagatttagtgaggagaatgcttgtccgagac
cctaaaaggcggctgacagcacatgaagttttgtgccacccctgggtgca
agttgatggtgtggctcccgataaggctcttgattctgcagttctaagtc
gcttaaaacaattttcagctatgaacaagctcaagaaaatggctctcaga
gtaattgcagagaggttgtctgaagaagaaatagctggcctgaaagaaat
gttcaagatgatagacactgacaacagtggtcaaatcacttttgacgaac
tcaaggccggattgaaaagatttggagcaactctggaggagtctgaaatt
tatgatctaatgcaagcagcagatgtcgataacagtggaaccattgatta
tggggagttcgtagctgcaacattgcatctgaacaaaattgagagagaag
atcatctattttcagctttctcctactttgataaggatggaagtggctat
attacttcagatgagcttcaagtagcttgtgaggagtttggcatagagga
tgttcggctcgaagagatgataagagaagttgatcaggacaatgatggac
gcatagattacaacgagtttgtagccatgatgcagaaaggaaattttgtt
ggcccgggtaagaagggattgcaaagtagcttcagcattgcctttagata
a