MDP0000033670, MDP0000033670 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000033670
Unique Name	MDP0000033670
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	5008

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr15	chromosome	chr15:45463469..45468476 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC005877.526	contig	MDC005877.526:1056..6063 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000033670_exon_1	MDP0000033670_exon_1	Malus x domestica	CDS
MDP0000033670_exon_2	MDP0000033670_exon_2	Malus x domestica	CDS
MDP0000033670_exon_3	MDP0000033670_exon_3	Malus x domestica	CDS
MDP0000033670_exon_4	MDP0000033670_exon_4	Malus x domestica	CDS
MDP0000033670_exon_5	MDP0000033670_exon_5	Malus x domestica	CDS
MDP0000033670_exon_6	MDP0000033670_exon_6	Malus x domestica	CDS
MDP0000033670_exon_7	MDP0000033670_exon_7	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000033670	MDP0000033670	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002293	Amino acid/polyamine transporter I	PIR	PIRSF006060	Amino acid transporter	coord: 14..502 score: 1.6
IPR002293	Amino acid/polyamine transporter I	PANTHER	PTHR11785	FAMILY NOT NAMED	coord: 2..500 score: 2e
IPR004840	Amino acid permease, conserved site	PROSITE	PS00218	AMINO_ACID_PERMEASE_1	coord: 50..81 score
None	No IPR available	PANTHER	PTHR11785:SF13	AMINO ACID PERMEASE-RELATED	coord: 2..500 score: 2e
None	No IPR available	PFAM	PF13520	AA_permease_2	coord: 22..474 score: 2
None	No IPR available	SEG	seg	seg	coord: 179..198 score: NAcoord: 262..272 score: NAcoord: 340..354 score: NAcoord: 380..395 score: NAcoord: 477..493 score
None	No IPR available	SEG	seg	seg	coord: 4..16 score
None	No IPR available	SEG	seg	seg	coord: 30..41 score
None	No IPR available	SEG	seg	seg	coord: 13..28 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:45463469..45468476+
mRNA from alignment at MDC005877.526:1056..6063+
coding sequence from alignment at MDC005877.526:1056..6063+

mRNA sequence

>MDP0000033670 ID=MDP0000033670; Name=MDP0000033670; organism=Malus x domestica; type=mRNA; length=5008bp
ATGGATTCCGGCGAAAAGCGGCTCAATGAGCTTGGATACAAGCAAGAACT
CAGAAGGGAAATGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
ATTTGTTGTTCTCTTTCTAGCCGTAGCTGGGTGTTAGCTTCTTTCATGTT
CATAAACTTTCTTGCAACCATGTTGAGAGAGGTTGAAATCTAATGTTTTT
CACTTGGTTTTCTACAGTCATTGTTCAAGACGATGGCAATAACATTTTCG
TGCATGTCGGTGTTCACTGGTACGCCTCTCTACGGCCAAAGTCTGCGCTA
TGCTGGTCCGGCACCCCTAATATGGGGTTGGATTGTTGTCACATTCTTCA
CATGGTTTGTCGGAATTGCCATGGCTGAGATATGCTCCTCTTTTCCGGTA
CGCGGTGCTGTTTTTCCCTTTCTTTTTCCTATGGACTTGTAAGCAACATC
TGAGATGATCTTGGTTGCTTTAAACATTGATCAGACCACAGGTTCTCTTT
ATTTTTGGGCTGCTCATCTGGCCGGACCCATGTGGGGGCCATTCGCGTCG
TGGTGCTGCGCTTGGCTTGAAAYCATCGGTCTGGTTTCCGCAATAGGTGC
TCAGGTATAGCCACTTCCTCTGCATCAAGTGRCTTTGAATCAAAGAGAAT
AACATGTTTTCTTGAATGCCTTTTATTTTCTTTCCCCTTTAGGCATATTC
CGCATCACAAGCGTTGCAGATGGTCATTCTTTTAGCCACAGGGACGAACA
AGGGCGGAGGCTATTTTGCATCGAGGGGTGTATTCCTGTGCATGTATATC
GGTCTGACCATCATATGGGCAGTGCTCAATACATTTGCATTACRAGTGAT
AGCATTTCTCAACATAATTTCGATATGGTGGCAGGTGAGCCCTTCCAACT
CCTTTGTTTTTGCATAAAAGATTCCATTGCAACATCAAGATAAAAGTAGC
TAGTTATCAATYTGATACCTTAACCCAAATCTAATACAACTTACAGTACT
AGGGGCATCTAAATGTTAGTTCACATTGTTCAAAATCTAAAAACAATCAA
TGAAGCTAACAATTTGACTTGGAACTGCCTACGATCCAAAGCGGAATATC
TTGACATTCATAATGACGGGTTTTGATCTTGACTTTGGCACCTGAATGAG
CTCAAAGATGCAAACATCTGCGTCCTTCAGTTTGTTGGCTTTGTAAAACT
CAATCCACCCTTTACTTTTTAAATAYGTACGACGACTCCAAGCAGCTTCA
ATTTTCTCTTTATCTTTCACAATTCCTATGTCCATTGGCCATAATTTTCC
AAACGGATCTTTAACACGCATGCAGGATTTGTCAAGAATGCCAGTTGATC
TTGCGAAGTCAAGGGGGATTGTCTGTCATAAACAATCACAAGTCAGACGG
ATTTTCCCCTAAACAAAATATCTTCAACATGCTAAGTTGCTAACCAATGT
TTAGTTGTAAGGATTGCAACTTAACCTGAACAAGCAGTCTAATATGACAA
CTCTGACTAGGACTGAAACTAAAACTTCGGAGTCTAGAGTATGCCCAATA
TGAATACTGTGAAAACAACTTCAGAAAATTGCGGACATAACAGCATGAGT
CAAGAAGACTTGATATGGAGAAAGAGAAGATAGAAAACTTACCGCGCTAG
GACATTTGACGTTCCAATGAGTTTTTGCCATTATTAACCTGAAGGAGGGA
GGAGGAAACWTTTTMTCACAACCTAGTGGCTCATAGACTTTCACATTAAA
GACCATGTTGCCTTTGTGTTCAAAGACTAGGAACTCTCCAACTTCCAGGC
TATGATTCTTCACAACTTCCTTCCAACCTTGTTTAAAACAAAACACTCCA
TCGCAAGTCCTACGAACTTGAACATCCCAGGATCCCTGACAGCTCTTAAT
AAGTGCTTTATCCAATTTCTTTTCGCCAAGGCTTCTAGTAAAGGCTATTG
GAATTGCCTGTTCATATGCATTACAAAAAATCAGCCCACATTTCCTAATC
ACTCAATTTAACCGGAAAACTCAGAAAAATTTACATGTATGTTTAGCATG
TATACACCTACAGTTAGATTTTATTGGATGTCCAAATGCAAGAATCAAAT
CGTTAAGTAAGCAGTCGAAAATGGTATGCACCATCCCAAAACTACAAGTA
TTTTCTTAGAACAAATATCCTTTTCGAAAACTGTCGGGTACTGAAGTCTC
TTTTTCTAAAGCAGAGTATGTGAAGTTAATCAAGAATTAACGAAAATGTG
TTGCAAACCCTGCAAAATCATTCAGATGTTCATGTGGCTYACAAATATCA
AAGTTTCAGCTCAGATTAGGTACTACATTGCCCATCTTCCTTTAAAGGTC
TWGCTTTTTTATTTCTCAAAAATATTGCTTTCTTGAAAAGAAATCTCCAG
ACAGATAGAAAATGAAAAACCATGTGCTTTCGGGTACATCCTATAAAATT
GGAAAGACAAACACAAGATTAAAATGACCCCTGCGTAACGTATATGTTCA
TTATGTACCCCAAATAAAGTGGTATGTGCTCTCAAAAAATACATTTCAAA
ATAACTCAGAAATATGCGAGTGAGTGTGAGTGTGTAGAGAGAGACATAGA
GAGAGAAGGGGAGAGGAAGAAGCATACCATTCCATTTTGGAAGCCAGGCG
TCAAAGGCTTGAAAAACTTTCTGGGAAAAGGAGGTGACCTGGCCATGAAT
CTCGACCAATCTGCCATGTGCAGATAGAAGAAATGTGAAGAAAAGAGGAG
AAATTTAGAGGGGAGGTGAAAAGTTAGGGTTTTTTTGGTTTACGAGCTGC
GGCGGAGGAGGAGAATAGTGTTGAATATATAGGTGGAAGGGACAGTACAT
AGGAGGTGGCCAACGCAGCAGTGGGTGGCAGAAAAGGGGTGGCGAATCCA
TAAATGCCATTGGCTGGAGGTCGTACGGCGAGTTCGTACTCTGCAGAAAC
GCTGCCTGAAACTATTGCATCACCGGCCTCGCTACAAATTTGAAAGAAGT
CCGTGCACAAGAATGTGGATTAAATTAACTTTGACAAGAATCAAATYTAA
AACATCTCATTTACAAGTAAAGAGGCATTAGATGTAGTACTAAGWCCTCT
CATTTAAATTAAGCCAGATAATAAGATTGTCATAAATAATTTAGTATCAA
GACACATACATCCCTTAGAGCTAGACGTGACCACAATCATATTAAAAATT
CAACCCTTAACACATTTATATATTTACTCGCATTCCTCATACGCACTAAC
TTGGCACACCKAAACGAATTATATAGACGTAATAGATCTTGAAACCCTTG
GCTTTGGTTGCCACTTTTGTACTTTCACAAGGTGATTTGTTATCTGCATG
TTGCGTGTGGGGCATGCTCTACTAACCTGAGGTTTTAGGACATGCTTAAT
TTGACCTCAATAAAAGGTGATAATGAATATCTTACCCACTTGACTTATCT
TCCTATATACTTAATTATAAGTCTATACTACCARGCTCARYGCTTTCATC
ATCACTTAAGMCTTGTTTAGTATTTTTAGACCAAAAATTTATGATGTGCT
CTCATTTTCTATACAGTGTTACACTCTATTGCATTTGTCTCATATATTAT
TCATATATCTACTAATCTGGTTWAACAAATACTAATTAACCTAACTGAAA
TTATACAGTTAATTGGTGGATTGTTAATAATCATAATGCTACCTCTGGTG
GCACAGCCAACACAGACAGCTTCCTACGTCTTCACACATTTCGAAACATC
TCCAGAGACAACTGGAGTATCCAGCATACCTTATGCGGTGATTTTATCTG
TGCTTCTTAGCAACTACTGTTTATATGGTTATGATGCAGCCGCTCATCTC
ACTGAGGAGACAAAAGGTGCAGATAGGACCGGTCCTATTGCCATTCTCTC
TAGTATTGCCCTTATATCAGTATTTGGTTGGGCTTATTACTTGGCTCTCA
CTTTCAGCATCAAGGTAMGCGGTTTTCGCACGCCTATTTTAATTATTATA
TGCACTTTAAGCTGAATATTTTACTATTTCTTACAYGCTCGCTGTTGAAA
ATTACTAGTGCTGTGTTTTGGTCAAGCTAACGGCGTTAWAATTGAAGGGA
AATGATAAGCACACTTTTTAAATTTCTCACACTATCCTGTTTAATCTTGT
TCTTTCGCTTGATTTATTTAATCTGACAGCTAGAAATAAAGAAGGGAGCC
TGAGAAGCTAAAAAATGTGTGTAAAAATCGTCTCCTATAACTATTGGATG
CTTATTAAGGTTAAATTTTTAATGCAGGACTTGGAGTATTTATACAGGGA
GGACAATGAGACTGGTGGTGCACTTGTACCAGCACAGATAATATATGATG
CATTCTATGGGAGGTTTCATAGTTCAACTGGAGCTGTTCTTTTCATGATT
ATCATATGGGGTTCCTTCTTCTTCTGTGGACTATCTGTAACCACAAYGGC
CGCCAGAGCAGTAAGAAAATCCGAAACTCTTAATCCTACATTTCTATATC
CTGAAGCTTCMAGTTAACTTTGTTTTTTCACTCCAAGGTTTACGCTGTAT
CAAGAGATAAATGCATCCCATTTTCGCCAATCTGGAGGAAAGTGCATCCA
AMGAGCAAGGTTCCAATAAACGCGGTGTGGCTTTGCACARCAATCACTTT
GCTGCTGGGATTACCGATCCTGAAACTTGACGTGGTGTTCACCGCCATTC
TTTCTGTCAGTACAGTTGGTTGGGTGGGCAGCTACGCTGTGCCAATTTTC
GCAAGGCTGGTGATGGCYGAAGAGAGCTTCAAACCGGGACCATTTTATTT
GGGGAGAGCAAGAAGGCCAGTTTGCTTTGTGGCCGTCCTTTGGATATGCT
ATACATGCTCAATATTTCTTTTGCCAACTTCTTACCCTCTTAGATTGAGA
ACATTMAACTATGCACCAATAGCTCTTGGTGCTGCTTTGGCTCTGGTAAT
GCTTTGGTGGGTTTTGGATGCAAGGAAATGGTACAAAGGACCGGTAAGAA
ACATTGAT

protein sequence of MDP0000033670

>MDP0000033670 ID=MDP0000033670; Name=MDP0000033670; organism=Malus x domestica; type=polypeptide; length=505bp
MDSGEKRLNELGYKQELRREMSLFKTMAITFSCMSVFTGTPLYGQSLRYA
GPAPLIWGWIVVTFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPMWGP
FASWCCAWLEXIGLVSAIGAQAYSASQALQMVILLATGTNKGGGYFASRG
VFLCMYIGLTIIWAVLNTFALXVIAFLNIISIWWQLIGGLLIIIMLPLVA
QPTQTASYVFTHFETSPETTGVSSIPYAVILSVLLSNYCLYGYDAAAHLT
EETKGADRTGPIAILSSIALISVFGWAYYLALTFSIKDLEYLYREDNETG
GALVPAQIIYDAFYGRFHSSTGAVLFMIIIWGSFFFCGLSVTTXAARAVY
AVSRDKCIPFSPIWRKVHPXSKVPINAVWLCTXITLLLGLPILKLDVVFT
AILSVSTVGWVGSYAVPIFARLVMAEESFKPGPFYLGRARRPVCFVAVLW
ICYTCSIFLLPTSYPLRLRTXNYAPIALGAALALVMLWWVLDARKWYKGP
VRNID

mRNA from alignment at chr15:45463469..45468476+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000033670 ID=MDP0000033670; Name=MDP0000033670; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr15:45463469..45468476+ (Malus x domestica

mRNA from alignment at MDC005877.526:1056..6063+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000033670 ID=MDP0000033670; Name=MDP0000033670; organism=Malus x domestica; type=mRNA; length=5008bp; location=Sequence derived from: MDC005877.526:1056..6063+ (Malus x domestica
ATGGATTCCGGCGAAAAGCGGCTCAATGAGCTTGGATACAAGCAAGAACT
CAGAAGGGAAATGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
ATTTGTTGTTCTCTTTCTAGCCGTAGCTGGGTGTTAGCTTCTTTCATGTT
CATAAACTTTCTTGCAACCATGTTGAGAGAGGTTGAAATCTAATGTTTTT
CACTTGGTTTTCTACAGTCATTGTTCAAGACGATGGCAATAACATTTTCG
TGCATGTCGGTGTTCACTGGTACGCCTCTCTACGGCCAAAGTCTGCGCTA
TGCTGGTCCGGCACCCCTAATATGGGGTTGGATTGTTGTCACATTCTTCA
CATGGTTTGTCGGAATTGCCATGGCTGAGATATGCTCCTCTTTTCCGGTA
CGCGGTGCTGTTTTTCCCTTTCTTTTTCCTATGGACTTGTAAGCAACATC
TGAGATGATCTTGGTTGCTTTAAACATTGATCAGACCACAGGTTCTCTTT
ATTTTTGGGCTGCTCATCTGGCCGGACCCATGTGGGGGCCATTCGCGTCG
TGGTGCTGCGCTTGGCTTGAAAYCATCGGTCTGGTTTCCGCAATAGGTGC
TCAGGTATAGCCACTTCCTCTGCATCAAGTGRCTTTGAATCAAAGAGAAT
AACATGTTTTCTTGAATGCCTTTTATTTTCTTTCCCCTTTAGGCATATTC
CGCATCACAAGCGTTGCAGATGGTCATTCTTTTAGCCACAGGGACGAACA
AGGGCGGAGGCTATTTTGCATCGAGGGGTGTATTCCTGTGCATGTATATC
GGTCTGACCATCATATGGGCAGTGCTCAATACATTTGCATTACRAGTGAT
AGCATTTCTCAACATAATTTCGATATGGTGGCAGGTGAGCCCTTCCAACT
CCTTTGTTTTTGCATAAAAGATTCCATTGCAACATCAAGATAAAAGTAGC
TAGTTATCAATYTGATACCTTAACCCAAATCTAATACAACTTACAGTACT
AGGGGCATCTAAATGTTAGTTCACATTGTTCAAAATCTAAAAACAATCAA
TGAAGCTAACAATTTGACTTGGAACTGCCTACGATCCAAAGCGGAATATC
TTGACATTCATAATGACGGGTTTTGATCTTGACTTTGGCACCTGAATGAG
CTCAAAGATGCAAACATCTGCGTCCTTCAGTTTGTTGGCTTTGTAAAACT
CAATCCACCCTTTACTTTTTAAATAYGTACGACGACTCCAAGCAGCTTCA
ATTTTCTCTTTATCTTTCACAATTCCTATGTCCATTGGCCATAATTTTCC
AAACGGATCTTTAACACGCATGCAGGATTTGTCAAGAATGCCAGTTGATC
TTGCGAAGTCAAGGGGGATTGTCTGTCATAAACAATCACAAGTCAGACGG
ATTTTCCCCTAAACAAAATATCTTCAACATGCTAAGTTGCTAACCAATGT
TTAGTTGTAAGGATTGCAACTTAACCTGAACAAGCAGTCTAATATGACAA
CTCTGACTAGGACTGAAACTAAAACTTCGGAGTCTAGAGTATGCCCAATA
TGAATACTGTGAAAACAACTTCAGAAAATTGCGGACATAACAGCATGAGT
CAAGAAGACTTGATATGGAGAAAGAGAAGATAGAAAACTTACCGCGCTAG
GACATTTGACGTTCCAATGAGTTTTTGCCATTATTAACCTGAAGGAGGGA
GGAGGAAACWTTTTMTCACAACCTAGTGGCTCATAGACTTTCACATTAAA
GACCATGTTGCCTTTGTGTTCAAAGACTAGGAACTCTCCAACTTCCAGGC
TATGATTCTTCACAACTTCCTTCCAACCTTGTTTAAAACAAAACACTCCA
TCGCAAGTCCTACGAACTTGAACATCCCAGGATCCCTGACAGCTCTTAAT
AAGTGCTTTATCCAATTTCTTTTCGCCAAGGCTTCTAGTAAAGGCTATTG
GAATTGCCTGTTCATATGCATTACAAAAAATCAGCCCACATTTCCTAATC
ACTCAATTTAACCGGAAAACTCAGAAAAATTTACATGTATGTTTAGCATG
TATACACCTACAGTTAGATTTTATTGGATGTCCAAATGCAAGAATCAAAT
CGTTAAGTAAGCAGTCGAAAATGGTATGCACCATCCCAAAACTACAAGTA
TTTTCTTAGAACAAATATCCTTTTCGAAAACTGTCGGGTACTGAAGTCTC
TTTTTCTAAAGCAGAGTATGTGAAGTTAATCAAGAATTAACGAAAATGTG
TTGCAAACCCTGCAAAATCATTCAGATGTTCATGTGGCTYACAAATATCA
AAGTTTCAGCTCAGATTAGGTACTACATTGCCCATCTTCCTTTAAAGGTC
TWGCTTTTTTATTTCTCAAAAATATTGCTTTCTTGAAAAGAAATCTCCAG
ACAGATAGAAAATGAAAAACCATGTGCTTTCGGGTACATCCTATAAAATT
GGAAAGACAAACACAAGATTAAAATGACCCCTGCGTAACGTATATGTTCA
TTATGTACCCCAAATAAAGTGGTATGTGCTCTCAAAAAATACATTTCAAA
ATAACTCAGAAATATGCGAGTGAGTGTGAGTGTGTAGAGAGAGACATAGA
GAGAGAAGGGGAGAGGAAGAAGCATACCATTCCATTTTGGAAGCCAGGCG
TCAAAGGCTTGAAAAACTTTCTGGGAAAAGGAGGTGACCTGGCCATGAAT
CTCGACCAATCTGCCATGTGCAGATAGAAGAAATGTGAAGAAAAGAGGAG
AAATTTAGAGGGGAGGTGAAAAGTTAGGGTTTTTTTGGTTTACGAGCTGC
GGCGGAGGAGGAGAATAGTGTTGAATATATAGGTGGAAGGGACAGTACAT
AGGAGGTGGCCAACGCAGCAGTGGGTGGCAGAAAAGGGGTGGCGAATCCA
TAAATGCCATTGGCTGGAGGTCGTACGGCGAGTTCGTACTCTGCAGAAAC
GCTGCCTGAAACTATTGCATCACCGGCCTCGCTACAAATTTGAAAGAAGT
CCGTGCACAAGAATGTGGATTAAATTAACTTTGACAAGAATCAAATYTAA
AACATCTCATTTACAAGTAAAGAGGCATTAGATGTAGTACTAAGWCCTCT
CATTTAAATTAAGCCAGATAATAAGATTGTCATAAATAATTTAGTATCAA
GACACATACATCCCTTAGAGCTAGACGTGACCACAATCATATTAAAAATT
CAACCCTTAACACATTTATATATTTACTCGCATTCCTCATACGCACTAAC
TTGGCACACCKAAACGAATTATATAGACGTAATAGATCTTGAAACCCTTG
GCTTTGGTTGCCACTTTTGTACTTTCACAAGGTGATTTGTTATCTGCATG
TTGCGTGTGGGGCATGCTCTACTAACCTGAGGTTTTAGGACATGCTTAAT
TTGACCTCAATAAAAGGTGATAATGAATATCTTACCCACTTGACTTATCT
TCCTATATACTTAATTATAAGTCTATACTACCARGCTCARYGCTTTCATC
ATCACTTAAGMCTTGTTTAGTATTTTTAGACCAAAAATTTATGATGTGCT
CTCATTTTCTATACAGTGTTACACTCTATTGCATTTGTCTCATATATTAT
TCATATATCTACTAATCTGGTTWAACAAATACTAATTAACCTAACTGAAA
TTATACAGTTAATTGGTGGATTGTTAATAATCATAATGCTACCTCTGGTG
GCACAGCCAACACAGACAGCTTCCTACGTCTTCACACATTTCGAAACATC
TCCAGAGACAACTGGAGTATCCAGCATACCTTATGCGGTGATTTTATCTG
TGCTTCTTAGCAACTACTGTTTATATGGTTATGATGCAGCCGCTCATCTC
ACTGAGGAGACAAAAGGTGCAGATAGGACCGGTCCTATTGCCATTCTCTC
TAGTATTGCCCTTATATCAGTATTTGGTTGGGCTTATTACTTGGCTCTCA
CTTTCAGCATCAAGGTAMGCGGTTTTCGCACGCCTATTTTAATTATTATA
TGCACTTTAAGCTGAATATTTTACTATTTCTTACAYGCTCGCTGTTGAAA
ATTACTAGTGCTGTGTTTTGGTCAAGCTAACGGCGTTAWAATTGAAGGGA
AATGATAAGCACACTTTTTAAATTTCTCACACTATCCTGTTTAATCTTGT
TCTTTCGCTTGATTTATTTAATCTGACAGCTAGAAATAAAGAAGGGAGCC
TGAGAAGCTAAAAAATGTGTGTAAAAATCGTCTCCTATAACTATTGGATG
CTTATTAAGGTTAAATTTTTAATGCAGGACTTGGAGTATTTATACAGGGA
GGACAATGAGACTGGTGGTGCACTTGTACCAGCACAGATAATATATGATG
CATTCTATGGGAGGTTTCATAGTTCAACTGGAGCTGTTCTTTTCATGATT
ATCATATGGGGTTCCTTCTTCTTCTGTGGACTATCTGTAACCACAAYGGC
CGCCAGAGCAGTAAGAAAATCCGAAACTCTTAATCCTACATTTCTATATC
CTGAAGCTTCMAGTTAACTTTGTTTTTTCACTCCAAGGTTTACGCTGTAT
CAAGAGATAAATGCATCCCATTTTCGCCAATCTGGAGGAAAGTGCATCCA
AMGAGCAAGGTTCCAATAAACGCGGTGTGGCTTTGCACARCAATCACTTT
GCTGCTGGGATTACCGATCCTGAAACTTGACGTGGTGTTCACCGCCATTC
TTTCTGTCAGTACAGTTGGTTGGGTGGGCAGCTACGCTGTGCCAATTTTC
GCAAGGCTGGTGATGGCYGAAGAGAGCTTCAAACCGGGACCATTTTATTT
GGGGAGAGCAAGAAGGCCAGTTTGCTTTGTGGCCGTCCTTTGGATATGCT
ATACATGCTCAATATTTCTTTTGCCAACTTCTTACCCTCTTAGATTGAGA
ACATTMAACTATGCACCAATAGCTCTTGGTGCTGCTTTGGCTCTGGTAAT
GCTTTGGTGGGTTTTGGATGCAAGGAAATGGTACAAAGGACCGGTAAGAA
ACATTGAT

Coding sequence (CDS) from alignment at MDC005877.526:1056..6063+

>MDP0000033670 ID=MDP0000033670; Name=MDP0000033670; organism=Malus x domestica; type=CDS; length=1515bp; location=Sequence derived from: MDC005877.526:1056..6063+ (Malus x domestica
ATGGATTCCGGCGAAAAGCGGCTCAATGAGCTTGGATACAAGCAAGAACT
CAGAAGGGAAATGTCATTGTTCAAGACGATGGCAATAACATTTTCGTGCA
TGTCGGTGTTCACTGGTACGCCTCTCTACGGCCAAAGTCTGCGCTATGCT
GGTCCGGCACCCCTAATATGGGGTTGGATTGTTGTCACATTCTTCACATG
GTTTGTCGGAATTGCCATGGCTGAGATATGCTCCTCTTTTCCGACCACAG
GTTCTCTTTATTTTTGGGCTGCTCATCTGGCCGGACCCATGTGGGGGCCA
TTCGCGTCGTGGTGCTGCGCTTGGCTTGAAAYCATCGGTCTGGTTTCCGC
AATAGGTGCTCAGGCATATTCCGCATCACAAGCGTTGCAGATGGTCATTC
TTTTAGCCACAGGGACGAACAAGGGCGGAGGCTATTTTGCATCGAGGGGT
GTATTCCTGTGCATGTATATCGGTCTGACCATCATATGGGCAGTGCTCAA
TACATTTGCATTACRAGTGATAGCATTTCTCAACATAATTTCGATATGGT
GGCAGTTAATTGGTGGATTGTTAATAATCATAATGCTACCTCTGGTGGCA
CAGCCAACACAGACAGCTTCCTACGTCTTCACACATTTCGAAACATCTCC
AGAGACAACTGGAGTATCCAGCATACCTTATGCGGTGATTTTATCTGTGC
TTCTTAGCAACTACTGTTTATATGGTTATGATGCAGCCGCTCATCTCACT
GAGGAGACAAAAGGTGCAGATAGGACCGGTCCTATTGCCATTCTCTCTAG
TATTGCCCTTATATCAGTATTTGGTTGGGCTTATTACTTGGCTCTCACTT
TCAGCATCAAGGACTTGGAGTATTTATACAGGGAGGACAATGAGACTGGT
GGTGCACTTGTACCAGCACAGATAATATATGATGCATTCTATGGGAGGTT
TCATAGTTCAACTGGAGCTGTTCTTTTCATGATTATCATATGGGGTTCCT
TCTTCTTCTGTGGACTATCTGTAACCACAAYGGCCGCCAGAGCAGTTTAC
GCTGTATCAAGAGATAAATGCATCCCATTTTCGCCAATCTGGAGGAAAGT
GCATCCAAMGAGCAAGGTTCCAATAAACGCGGTGTGGCTTTGCACARCAA
TCACTTTGCTGCTGGGATTACCGATCCTGAAACTTGACGTGGTGTTCACC
GCCATTCTTTCTGTCAGTACAGTTGGTTGGGTGGGCAGCTACGCTGTGCC
AATTTTCGCAAGGCTGGTGATGGCYGAAGAGAGCTTCAAACCGGGACCAT
TTTATTTGGGGAGAGCAAGAAGGCCAGTTTGCTTTGTGGCCGTCCTTTGG
ATATGCTATACATGCTCAATATTTCTTTTGCCAACTTCTTACCCTCTTAG
ATTGAGAACATTMAACTATGCACCAATAGCTCTTGGTGCTGCTTTGGCTC
TGGTAATGCTTTGGTGGGTTTTGGATGCAAGGAAATGGTACAAAGGACCG
GTAAGAAACATTGAT

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1
IPR004840	Amoino_acid_permease_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0003333	amino acid transmembrane transport
GO:0006865	amino acid transport
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015171	amino acid transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral to membrane