MDP0000187983, MDP0000187983 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000187983
Unique Name	MDP0000187983
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	5189

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr15	chromosome	chr15:8795714..8800902 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC009673.411	contig	MDC009673.411:12651..17839 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000187983_exon_1	MDP0000187983_exon_1	Malus x domestica	CDS
MDP0000187983_exon_2	MDP0000187983_exon_2	Malus x domestica	CDS
MDP0000187983_exon_3	MDP0000187983_exon_3	Malus x domestica	CDS
MDP0000187983_exon_4	MDP0000187983_exon_4	Malus x domestica	CDS
MDP0000187983_exon_5	MDP0000187983_exon_5	Malus x domestica	CDS
MDP0000187983_exon_6	MDP0000187983_exon_6	Malus x domestica	CDS
MDP0000187983_exon_7	MDP0000187983_exon_7	Malus x domestica	CDS
MDP0000187983_exon_8	MDP0000187983_exon_8	Malus x domestica	CDS
MDP0000187983_exon_9	MDP0000187983_exon_9	Malus x domestica	CDS
MDP0000187983_exon_10	MDP0000187983_exon_10	Malus x domestica	CDS
MDP0000187983_exon_11	MDP0000187983_exon_11	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000187983	MDP0000187983	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013216	Methyltransferase type 11	PFAM	PF08241	Methyltransf_11	coord: 159..260 score: 3.2e-18coord: 537..637 score: 2.9
None	No IPR available	GENE3D	3.40.50.150	no description	coord: 114..281 score: 1.1e-23coord: 500..686 score: 5
None	No IPR available	PANTHER	PTHR10108	FAMILY NOT NAMED	coord: 426..694 score: 5.5e
None	No IPR available	PANTHER	PTHR10108:SF157	METHYLTRANSFERASE-RELATED	coord: 426..694 score: 5.5e
None	No IPR available	SEG	seg	seg	coord: 149..166 score: NAcoord: 309..325 score: NAcoord: 335..381 score
None	No IPR available	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 497..699 score: 4.5e-32coord: 114..290 score: 1.2
None	No IPR available	SEG	seg	seg	coord: 56..64 score
None	No IPR available	SEG	seg	seg	coord: 26..37 score: NAcoord: 91..109 score
None	No IPR available	SEG	seg	seg	coord: 11..35 score
None	No IPR available	SEG	seg	seg	coord: 11..18 score
None	No IPR available	SEG	seg	seg	coord: 2..21 score: NAcoord: 25..46 score
None	No IPR available	SEG	seg	seg	coord: 44..59 score
None	No IPR available	SEG	seg	seg	coord: 43..49 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:8795714..8800902+
mRNA from alignment at MDC009673.411:12651..17839+
coding sequence from alignment at MDC009673.411:12651..17839+

mRNA sequence

>MDP0000187983 ID=MDP0000187983; Name=MDP0000187983; organism=Malus x domestica; type=mRNA; length=5189bp
ATGGCTTCTTCGTCTCTTCACCAAGCAACGGAAACCGGAAATGCAAGCTC
CCTACTTACTTTCCAACCCGAAACWCAAAKCTCCGGCGATGGCATTGAGC
TGTTAGCATGCCCTGTGTGCTACGAACCGCTCATCCGAAAAGGCCCCCCC
GGTCTCAACCTGTAAGTAGTACTTCTCCATCTGACTTCATTAACATCGTA
ACTGTACCATTTTGTAATTTGTTTGTGTTTTTGTAGGCAAGCAATATTTA
GGTCGGCTTTCGAGTGCAAGATATGCCACAAGTTGTATAACAGCAGTAGT
AAGAGCAAAGAGAAAGACATTTACCTGGATCTTACTGTTAGCGGTGGATT
GAGGGAGTACATTGCGCCCAWTCCAGCCGGGACTGACTTCTTCAGATATC
GCCTCGTTTCCTTCTTGTACGAAAGAGGTTGGCGTCAGTATTTTGGCCAA
AGCGGCTTCCCTGGACCTGATCAAGAGGTACGCAATGCGCGCTATACATA
AGAGTACYCTCTACATGCACTACGTTCGTAATACACTTGTTAATTATGTC
CTCCGTACATACGCAGTTTAAAATGGCTATGGACTACTTTCAATCCGCTA
CTGATCAAGGTGAAGGTGGCGGTAGTGGTGGTGTAGTTGTGGATGTAAGC
TGTGGGAGCGGTTTATTTTCCAGAAGATTTGCCAAATCCGGGGTCTTTGC
TGGAGTAGTGGCGCTCGATTTTTCTGAGAGTATGCTTCGCCAGTGTTACA
ATTTTCTGAAGGCAGATCCTGCTTCCCTTTTTGCTACGTACGTATGCTCT
TGCTCAACCTAAAATAAAAATCCCATGTATTTCAAATTTGTACTCTCAGA
CATGATTAATTGGAACAAATTTATATGTAGCAATCTTGGTCTCGTGAGGG
CAGATGTTTCTAGGCTTCCATTTGCATCAGGTTCTGTTGATGCTGTCCAC
GCCGGCGCTGCATTGCATTGCTGGCCGTCTCCATCCAACGCCGTAAGTGT
GTTACTCGCCGGCGGCCAACTGGCTAGCTAGCATTTAATTATGTTTACTC
GAAWTTTTTTTTTTTGTTACAATTCAGAATTTTACATGAACTCTCATGGT
CATGTAAATACGGAACTAGTCGATCTCCAYCCTAAATTTATTACGGGAAA
GTACTTGGCTCTTTACGTGTGATGAGTAATTCGACCTGGCAGACAAATCG
GAGTYCCTCATTCCTGATAWTTAATTTGTTGTTTTTTAGGTTGCTGAAAT
CACTCGTATATTACGCAGTGGCGCCATCTTTGTGGGAACGACTTTTCTGC
GTTCTAGTCCTTATACTCCATGGATATTCAAGCCTTTTAGGGAGGTATAC
TAATTACWAACTGTAACTTATTCTCACTAATTCAATGATTAACGTATCTG
ATCAAGATGTTTAATATATATGTGATGAACAGAAGATGTCACGGAGCTCC
AATAGCTATTTAACGGAGAGAGAGATTGAGGACTTGTGTAGATCATGCGG
TCTCACCAACTACTCGAGCAAAGTTCAGCAATCCTTCATCATGTTTTCTG
CTCGGAAACCGGCTGTGTAGCAAACAGCGTGCGGGCCATCATTATAGACC
ACGCAAGAAGTCTTGTAACTCAAATAGTTAAAATAGAGATCACAACWAAG
TTCGAATGCTACTATTGATACAAAGAACCACTCTTTCTTAGTTGATCCAA
TTCGTAAATTTGAAAGTATTGAATTATAAATTTTAAGATGGATCTACATA
GATATTTTGGATTCTGTGTTTTTTTGCAAAGAAATAATCTCTTTCCTCTC
ATATTCAACAAATTTGGGAGGTCTTRTACACTCCTTTTAGGACTACATCT
TCTCAATCCTCGATATCTTCTGTTTTTTGTACGTAAGGAGTAGATCAGGT
AGTTGAGAAACAAGAAAAACTAGATTTTCCAAATAATGGTAATTTCCTTA
GGAATCTATTTCATACGTTTGTATATAGCAGGCAAGAGATTACATTGAAT
TATTATGTGTAGTTAAAAATTTGGGAAGAAAAACCGAGTTTCTAGGACGA
GCACGTAATTTTGTGYGGGGTTAAAATGTGAGGTGTGAGAGTAGTATTAA
AAAAATTATGTTGAATGTATTAGGATAAGTTTGGTTTGAAAGTGACGTCG
TATACTATTGCCTCCGTGTCTCTTTCTCCGCCAAATTTTTKCTGTTTCAA
CTCTCACTCTCCGCCAATTTCAAAAGAAGAAGCAGCAGCGGCAGAGATCA
AAATCTCCAATGGCGAYGACACCCTCYTCCTCCACTCTCCACCCTCTCCA
CCAAACATTTCTATCCCTAAGCTACCCTCCCCTCCATCACAATACTCAAT
TCCGCCCTCCCCATCTCTGCCTCACCTCCCGCCATTCCTCCCACCCCATT
CGCGCCACCTCYACCGTCACTCTCCAACCGGTACCGCCTCATTCTCCCCC
CTCTCCCCAATTTACGCTTCCACTTTCCCTTTAAATTTCAAAGTTCTGAT
TTTGCAGGAGCGGCGGTCGACCGCCGAGGAAGGTCAAAGCTCCGGCGTTG
ACCTCGAGCTGCTAGCCTGCCCAGTATGCTACGAGCCGCTCATCCGGAAA
GGCCCGCCGGGTCTCAACCTGTGAGTAAAAATACGACACAAAGCCTCAGT
CTTTTGCTTGAAATCGGTGTCGTAAATGTTTCAATTTTGTTTTGTGGTTT
GCAAATTGTGCAGGCGAGCAATTTACAGGTCGGGGTTCAAGTGCAGGAAA
TGCGAYAAGTCGTATTCRAGCAAAGACATTTACTTGGACCTTACTGTTAC
TGCTGGGTTGAAGGAGTACGTTGAGGTAAAACCGGCCGGGACCGAGTTGT
TCCGGAGCCCTATTGTTTCCTTCTTGTATGAAAGGGGTTGGCGCCAGAAT
TTTAACCGCAGGGGATTTCCGGGTCCCGATGAAGAGGTCAATCAGTAAAT
GTGGTTTCTTTTTCTGCGCGGTTTTTGGTGAATTAGGTTTGTTTTCTTGC
TTAATTTTGAGTTTTGGATTGCTTAGCAAGTTTAGATTCTTATGTGGTTT
GCAGTTTAAGATGGCTCAGGACTACTTTAAATCCGCCGAAGGCGGTGTTT
TGGTGGATGTGAGCTGTGGCAGCGGCTTGTTTTCGAGGAAGTTTGCGAAA
TCGGGGACATATTCTGGAGTTGTTGCACTTGATTTTTCGGAGAACATGCT
TCGGCAGAGTTATGAATTTTTTAAGAGAGATCCTACTCTTTTAGATACGT
AAGTTTGTGTCTGTTCTTCTGAGTGATCAATGTTTATAAGTAAAATGAGA
TGTTTATCCTTAARGTTCACTGGAATAAGTGCAGTAATCTTGCCCTTGTG
AGGGCGGATGTTGCTAGGCTTCCGTTCCCTTCGGGTTCAGTTGATGCTGT
CCATGCTGGCGCAGCATTACATTGTTGGCCTTCTCCTTCCAATGCYGTGA
GTTCTGTTTCCTGTGTTTTTCTTCTCCTTCAAGTTACYAAGCGCTTAGGA
TTGTATGTCTATTAAGAGTGGTTGGGTTTGGATGGTTTAAGACCAGCAAG
ATTAGGATTGTATCTCTTCCATTAATTTTGACTTTCCCTGCTGTTTCCAG
ATTCCCCAAAACAATTTTGTTTTGTGCGTCAAAACAAATGTGTTGGCTRC
GTACMTTTTATGGTATTGGAGGTGCTAGTATGTGAAGTCAGAGGATGAAC
TGCGTAGTGTCTAACGCAAGTCGCCTGCTATTTTGGTAACTTGTGAGAAT
TTCACGGTGAAAGGCACCATATGGGGAATTAATCTTTGAACCATTGAAAT
CTGGAYTGATTGGTAATTAGGAATATGAGATGAAATGTGAAATAGCGAGT
AAAACTTAGAGGTGAGTAAAMACCATGGCTCCTTACAAGTGACCAAAAGA
AGTAGGCATCTTATGGTGCCATGGTGTGTGAGAAATAGATGGATGATACC
TTTTGAGAATTCCAGCWTGTTATAAAATAGACCCTGATAAGTTTCTTCTG
TTCTTTCCGRAAATTGCTCACGTCAGACCCGAGGGTGTTGTCTTAGTAGC
TCTTCAACTTGGGTTTGGACACCAATTTTGAATGCTAATGCAAAACCCTT
TATTATTGCGTGGAGTGTTTTGGATGGGGGACTATGCTTGCTAGGAGATT
AGCTGAGTAATCTAACAGGCTAGTGGCAGTACATACCTGGTCAGCAAGGA
AGAGAGAGCAGGTAGTGATTAACGAACCTAACAATCTTAGTTATACTGTA
TGTGGGTCAATTRGAATCAGAAATCTAACCTTTAGGTAAAAGATTTCAGC
TTTTGTGGAATTACAAACTTTCTATTAATGCACATGCCATAGTGTGTGCC
CCATTGCAGAGTTAGTTCACATGGAACACACTGCAGTTTTCGATAGAAGA
AAGATRGTACTCCACAAATTCTGGTGTTCTCGTCTTTGGCTCCCATATTA
GATACATCTTTTCGGGTGTAATTAATGAAATTAGCTCTCGGGTGGTTTRC
TTATAGCACCTGTTCTCTGGTAGACCTCTATTTGTTGCATCTGAAAGTCA
TACACTGTCGAATCTTGTAAAATTTTCTTTGTTTTACTCCATGCAGATGT
GTTTGGATGCAACAAAGCTTCTATTAATTTTGAACTCATATCTCATTTAA
TTTTCAGATTGCTGAAATAACTCGCATATTACGAAGTGGTGCTGTCTTTG
TCGGAACCACTTTTCTGCGGTATACTCCATCTACTTCCTGGATACCCCGG
CAACTCAKAGAGGTAATACTTAATCAATGATTACCAAATGTGATCAATGC
TAGATTTGGGTCAGACCTGTCAATTTTCTATCTGTATATGCYAGTCATAG
AATGTGTGTTCAAAACAACAATTGMGTAATATCCACATTTCTTTTCTAGT
TCCATATAAATTGTCGTGAATGAAGGAAACCTAATCGTTACTGTGGTCCA
AATAGTTGAATTTTCGTGAGAGACGACTCACTAGCAGTAGCCAGCTAGGA
TCTGTTTAAGGGTGATTATAAACTTAAACAAGTGTTAATATGAAGGTGTT
AATATGGCAGAGGGCTCGTCAGAGCTATAACTATTTAACGGAGGAGGAGA
TTGCAGACTTGTGTACATCATGCGGTCTCACCAACTACACGAGCAACGTT
CAACAATCCTTCATCATGTTTTCTGCTCAGAAACCTTAA

protein sequence of MDP0000187983

>MDP0000187983 ID=MDP0000187983; Name=MDP0000187983; organism=Malus x domestica; type=polypeptide; length=699bp
MASSSLHQATETGNASSLLTFQPETQXSGDGIELLACPVCYEPLIRKGPP
GLNLQAIFRSAFECKICHKLYNSSSKSKEKDIYLDLTVSGGLREYIAPXP
AGTDFFRYRLVSFLYERGWRQYFGQSGFPGPDQEFKMAMDYFQSATDQGE
GGGSGGVVVDVSCGSGLFSRRFAKSGVFAGVVALDFSESMLRQCYNFLKA
DPASLFATNLGLVRADVSRLPFASGSVDAVHAGAALHCWPSPSNAVAEIT
RILRSGAIFVGTTFLRSSPYTPWIFKPFREDKFGLKVTSYTIASVSLSPP
NFXCFNSHSPPISKEEAAAAEIKISNGDDTLXLHSPPSPPNISIPKLPSP
PSQYSIPPSPSLPHLPPFLPPHSRHLXRHSPTGTASFSPLSPIYASTFPL
NFKVLILQERRSTAEEGQSSGVDLELLACPVCYEPLIRKGPPGLNLRAIY
RSGFKCRKCDKSYSSKDIYLDLTVTAGLKEYVEVKPAGTELFRSPIVSFL
YERGWRQNFNRRGFPGPDEEFKMAQDYFKSAEGGVLVDVSCGSGLFSRKF
AKSGTYSGVVALDFSENMLRQSYEFFKRDPTLLDTNLALVRADVARLPFP
SGSVDAVHAGAALHCWPSPSNAIAEITRILRSGAVFVGTTFLRYTPSTSW
IPRQLXERARQSYNYLTEEEIADLCTSCGLTNYTSNVQQSFIMFSAQKP

mRNA from alignment at chr15:8795714..8800902+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000187983 ID=MDP0000187983; Name=MDP0000187983; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr15:8795714..8800902+ (Malus x domestica

mRNA from alignment at MDC009673.411:12651..17839+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000187983 ID=MDP0000187983; Name=MDP0000187983; organism=Malus x domestica; type=mRNA; length=5189bp; location=Sequence derived from: MDC009673.411:12651..17839+ (Malus x domestica
ATGGCTTCTTCGTCTCTTCACCAAGCAACGGAAACCGGAAATGCAAGCTC
CCTACTTACTTTCCAACCCGAAACWCAAAKCTCCGGCGATGGCATTGAGC
TGTTAGCATGCCCTGTGTGCTACGAACCGCTCATCCGAAAAGGCCCCCCC
GGTCTCAACCTGTAAGTAGTACTTCTCCATCTGACTTCATTAACATCGTA
ACTGTACCATTTTGTAATTTGTTTGTGTTTTTGTAGGCAAGCAATATTTA
GGTCGGCTTTCGAGTGCAAGATATGCCACAAGTTGTATAACAGCAGTAGT
AAGAGCAAAGAGAAAGACATTTACCTGGATCTTACTGTTAGCGGTGGATT
GAGGGAGTACATTGCGCCCAWTCCAGCCGGGACTGACTTCTTCAGATATC
GCCTCGTTTCCTTCTTGTACGAAAGAGGTTGGCGTCAGTATTTTGGCCAA
AGCGGCTTCCCTGGACCTGATCAAGAGGTACGCAATGCGCGCTATACATA
AGAGTACYCTCTACATGCACTACGTTCGTAATACACTTGTTAATTATGTC
CTCCGTACATACGCAGTTTAAAATGGCTATGGACTACTTTCAATCCGCTA
CTGATCAAGGTGAAGGTGGCGGTAGTGGTGGTGTAGTTGTGGATGTAAGC
TGTGGGAGCGGTTTATTTTCCAGAAGATTTGCCAAATCCGGGGTCTTTGC
TGGAGTAGTGGCGCTCGATTTTTCTGAGAGTATGCTTCGCCAGTGTTACA
ATTTTCTGAAGGCAGATCCTGCTTCCCTTTTTGCTACGTACGTATGCTCT
TGCTCAACCTAAAATAAAAATCCCATGTATTTCAAATTTGTACTCTCAGA
CATGATTAATTGGAACAAATTTATATGTAGCAATCTTGGTCTCGTGAGGG
CAGATGTTTCTAGGCTTCCATTTGCATCAGGTTCTGTTGATGCTGTCCAC
GCCGGCGCTGCATTGCATTGCTGGCCGTCTCCATCCAACGCCGTAAGTGT
GTTACTCGCCGGCGGCCAACTGGCTAGCTAGCATTTAATTATGTTTACTC
GAAWTTTTTTTTTTTGTTACAATTCAGAATTTTACATGAACTCTCATGGT
CATGTAAATACGGAACTAGTCGATCTCCAYCCTAAATTTATTACGGGAAA
GTACTTGGCTCTTTACGTGTGATGAGTAATTCGACCTGGCAGACAAATCG
GAGTYCCTCATTCCTGATAWTTAATTTGTTGTTTTTTAGGTTGCTGAAAT
CACTCGTATATTACGCAGTGGCGCCATCTTTGTGGGAACGACTTTTCTGC
GTTCTAGTCCTTATACTCCATGGATATTCAAGCCTTTTAGGGAGGTATAC
TAATTACWAACTGTAACTTATTCTCACTAATTCAATGATTAACGTATCTG
ATCAAGATGTTTAATATATATGTGATGAACAGAAGATGTCACGGAGCTCC
AATAGCTATTTAACGGAGAGAGAGATTGAGGACTTGTGTAGATCATGCGG
TCTCACCAACTACTCGAGCAAAGTTCAGCAATCCTTCATCATGTTTTCTG
CTCGGAAACCGGCTGTGTAGCAAACAGCGTGCGGGCCATCATTATAGACC
ACGCAAGAAGTCTTGTAACTCAAATAGTTAAAATAGAGATCACAACWAAG
TTCGAATGCTACTATTGATACAAAGAACCACTCTTTCTTAGTTGATCCAA
TTCGTAAATTTGAAAGTATTGAATTATAAATTTTAAGATGGATCTACATA
GATATTTTGGATTCTGTGTTTTTTTGCAAAGAAATAATCTCTTTCCTCTC
ATATTCAACAAATTTGGGAGGTCTTRTACACTCCTTTTAGGACTACATCT
TCTCAATCCTCGATATCTTCTGTTTTTTGTACGTAAGGAGTAGATCAGGT
AGTTGAGAAACAAGAAAAACTAGATTTTCCAAATAATGGTAATTTCCTTA
GGAATCTATTTCATACGTTTGTATATAGCAGGCAAGAGATTACATTGAAT
TATTATGTGTAGTTAAAAATTTGGGAAGAAAAACCGAGTTTCTAGGACGA
GCACGTAATTTTGTGYGGGGTTAAAATGTGAGGTGTGAGAGTAGTATTAA
AAAAATTATGTTGAATGTATTAGGATAAGTTTGGTTTGAAAGTGACGTCG
TATACTATTGCCTCCGTGTCTCTTTCTCCGCCAAATTTTTKCTGTTTCAA
CTCTCACTCTCCGCCAATTTCAAAAGAAGAAGCAGCAGCGGCAGAGATCA
AAATCTCCAATGGCGAYGACACCCTCYTCCTCCACTCTCCACCCTCTCCA
CCAAACATTTCTATCCCTAAGCTACCCTCCCCTCCATCACAATACTCAAT
TCCGCCCTCCCCATCTCTGCCTCACCTCCCGCCATTCCTCCCACCCCATT
CGCGCCACCTCYACCGTCACTCTCCAACCGGTACCGCCTCATTCTCCCCC
CTCTCCCCAATTTACGCTTCCACTTTCCCTTTAAATTTCAAAGTTCTGAT
TTTGCAGGAGCGGCGGTCGACCGCCGAGGAAGGTCAAAGCTCCGGCGTTG
ACCTCGAGCTGCTAGCCTGCCCAGTATGCTACGAGCCGCTCATCCGGAAA
GGCCCGCCGGGTCTCAACCTGTGAGTAAAAATACGACACAAAGCCTCAGT
CTTTTGCTTGAAATCGGTGTCGTAAATGTTTCAATTTTGTTTTGTGGTTT
GCAAATTGTGCAGGCGAGCAATTTACAGGTCGGGGTTCAAGTGCAGGAAA
TGCGAYAAGTCGTATTCRAGCAAAGACATTTACTTGGACCTTACTGTTAC
TGCTGGGTTGAAGGAGTACGTTGAGGTAAAACCGGCCGGGACCGAGTTGT
TCCGGAGCCCTATTGTTTCCTTCTTGTATGAAAGGGGTTGGCGCCAGAAT
TTTAACCGCAGGGGATTTCCGGGTCCCGATGAAGAGGTCAATCAGTAAAT
GTGGTTTCTTTTTCTGCGCGGTTTTTGGTGAATTAGGTTTGTTTTCTTGC
TTAATTTTGAGTTTTGGATTGCTTAGCAAGTTTAGATTCTTATGTGGTTT
GCAGTTTAAGATGGCTCAGGACTACTTTAAATCCGCCGAAGGCGGTGTTT
TGGTGGATGTGAGCTGTGGCAGCGGCTTGTTTTCGAGGAAGTTTGCGAAA
TCGGGGACATATTCTGGAGTTGTTGCACTTGATTTTTCGGAGAACATGCT
TCGGCAGAGTTATGAATTTTTTAAGAGAGATCCTACTCTTTTAGATACGT
AAGTTTGTGTCTGTTCTTCTGAGTGATCAATGTTTATAAGTAAAATGAGA
TGTTTATCCTTAARGTTCACTGGAATAAGTGCAGTAATCTTGCCCTTGTG
AGGGCGGATGTTGCTAGGCTTCCGTTCCCTTCGGGTTCAGTTGATGCTGT
CCATGCTGGCGCAGCATTACATTGTTGGCCTTCTCCTTCCAATGCYGTGA
GTTCTGTTTCCTGTGTTTTTCTTCTCCTTCAAGTTACYAAGCGCTTAGGA
TTGTATGTCTATTAAGAGTGGTTGGGTTTGGATGGTTTAAGACCAGCAAG
ATTAGGATTGTATCTCTTCCATTAATTTTGACTTTCCCTGCTGTTTCCAG
ATTCCCCAAAACAATTTTGTTTTGTGCGTCAAAACAAATGTGTTGGCTRC
GTACMTTTTATGGTATTGGAGGTGCTAGTATGTGAAGTCAGAGGATGAAC
TGCGTAGTGTCTAACGCAAGTCGCCTGCTATTTTGGTAACTTGTGAGAAT
TTCACGGTGAAAGGCACCATATGGGGAATTAATCTTTGAACCATTGAAAT
CTGGAYTGATTGGTAATTAGGAATATGAGATGAAATGTGAAATAGCGAGT
AAAACTTAGAGGTGAGTAAAMACCATGGCTCCTTACAAGTGACCAAAAGA
AGTAGGCATCTTATGGTGCCATGGTGTGTGAGAAATAGATGGATGATACC
TTTTGAGAATTCCAGCWTGTTATAAAATAGACCCTGATAAGTTTCTTCTG
TTCTTTCCGRAAATTGCTCACGTCAGACCCGAGGGTGTTGTCTTAGTAGC
TCTTCAACTTGGGTTTGGACACCAATTTTGAATGCTAATGCAAAACCCTT
TATTATTGCGTGGAGTGTTTTGGATGGGGGACTATGCTTGCTAGGAGATT
AGCTGAGTAATCTAACAGGCTAGTGGCAGTACATACCTGGTCAGCAAGGA
AGAGAGAGCAGGTAGTGATTAACGAACCTAACAATCTTAGTTATACTGTA
TGTGGGTCAATTRGAATCAGAAATCTAACCTTTAGGTAAAAGATTTCAGC
TTTTGTGGAATTACAAACTTTCTATTAATGCACATGCCATAGTGTGTGCC
CCATTGCAGAGTTAGTTCACATGGAACACACTGCAGTTTTCGATAGAAGA
AAGATRGTACTCCACAAATTCTGGTGTTCTCGTCTTTGGCTCCCATATTA
GATACATCTTTTCGGGTGTAATTAATGAAATTAGCTCTCGGGTGGTTTRC
TTATAGCACCTGTTCTCTGGTAGACCTCTATTTGTTGCATCTGAAAGTCA
TACACTGTCGAATCTTGTAAAATTTTCTTTGTTTTACTCCATGCAGATGT
GTTTGGATGCAACAAAGCTTCTATTAATTTTGAACTCATATCTCATTTAA
TTTTCAGATTGCTGAAATAACTCGCATATTACGAAGTGGTGCTGTCTTTG
TCGGAACCACTTTTCTGCGGTATACTCCATCTACTTCCTGGATACCCCGG
CAACTCAKAGAGGTAATACTTAATCAATGATTACCAAATGTGATCAATGC
TAGATTTGGGTCAGACCTGTCAATTTTCTATCTGTATATGCYAGTCATAG
AATGTGTGTTCAAAACAACAATTGMGTAATATCCACATTTCTTTTCTAGT
TCCATATAAATTGTCGTGAATGAAGGAAACCTAATCGTTACTGTGGTCCA
AATAGTTGAATTTTCGTGAGAGACGACTCACTAGCAGTAGCCAGCTAGGA
TCTGTTTAAGGGTGATTATAAACTTAAACAAGTGTTAATATGAAGGTGTT
AATATGGCAGAGGGCTCGTCAGAGCTATAACTATTTAACGGAGGAGGAGA
TTGCAGACTTGTGTACATCATGCGGTCTCACCAACTACACGAGCAACGTT
CAACAATCCTTCATCATGTTTTCTGCTCAGAAACCTTAA

Coding sequence (CDS) from alignment at MDC009673.411:12651..17839+

>MDP0000187983 ID=MDP0000187983; Name=MDP0000187983; organism=Malus x domestica; type=CDS; length=2100bp; location=Sequence derived from: MDC009673.411:12651..17839+ (Malus x domestica
ATGGCTTCTTCGTCTCTTCACCAAGCAACGGAAACCGGAAATGCAAGCTC
CCTACTTACTTTCCAACCCGAAACWCAAAKCTCCGGCGATGGCATTGAGC
TGTTAGCATGCCCTGTGTGCTACGAACCGCTCATCCGAAAAGGCCCCCCC
GGTCTCAACCTGCAAGCAATATTTAGGTCGGCTTTCGAGTGCAAGATATG
CCACAAGTTGTATAACAGCAGTAGTAAGAGCAAAGAGAAAGACATTTACC
TGGATCTTACTGTTAGCGGTGGATTGAGGGAGTACATTGCGCCCAWTCCA
GCCGGGACTGACTTCTTCAGATATCGCCTCGTTTCCTTCTTGTACGAAAG
AGGTTGGCGTCAGTATTTTGGCCAAAGCGGCTTCCCTGGACCTGATCAAG
AGTTTAAAATGGCTATGGACTACTTTCAATCCGCTACTGATCAAGGTGAA
GGTGGCGGTAGTGGTGGTGTAGTTGTGGATGTAAGCTGTGGGAGCGGTTT
ATTTTCCAGAAGATTTGCCAAATCCGGGGTCTTTGCTGGAGTAGTGGCGC
TCGATTTTTCTGAGAGTATGCTTCGCCAGTGTTACAATTTTCTGAAGGCA
GATCCTGCTTCCCTTTTTGCTACCAATCTTGGTCTCGTGAGGGCAGATGT
TTCTAGGCTTCCATTTGCATCAGGTTCTGTTGATGCTGTCCACGCCGGCG
CTGCATTGCATTGCTGGCCGTCTCCATCCAACGCCGTTGCTGAAATCACT
CGTATATTACGCAGTGGCGCCATCTTTGTGGGAACGACTTTTCTGCGTTC
TAGTCCTTATACTCCATGGATATTCAAGCCTTTTAGGGAGGATAAGTTTG
GTTTGAAAGTGACGTCGTATACTATTGCCTCCGTGTCTCTTTCTCCGCCA
AATTTTTKCTGTTTCAACTCTCACTCTCCGCCAATTTCAAAAGAAGAAGC
AGCAGCGGCAGAGATCAAAATCTCCAATGGCGAYGACACCCTCYTCCTCC
ACTCTCCACCCTCTCCACCAAACATTTCTATCCCTAAGCTACCCTCCCCT
CCATCACAATACTCAATTCCGCCCTCCCCATCTCTGCCTCACCTCCCGCC
ATTCCTCCCACCCCATTCGCGCCACCTCYACCGTCACTCTCCAACCGGTA
CCGCCTCATTCTCCCCCCTCTCCCCAATTTACGCTTCCACTTTCCCTTTA
AATTTCAAAGTTCTGATTTTGCAGGAGCGGCGGTCGACCGCCGAGGAAGG
TCAAAGCTCCGGCGTTGACCTCGAGCTGCTAGCCTGCCCAGTATGCTACG
AGCCGCTCATCCGGAAAGGCCCGCCGGGTCTCAACCTGCGAGCAATTTAC
AGGTCGGGGTTCAAGTGCAGGAAATGCGAYAAGTCGTATTCRAGCAAAGA
CATTTACTTGGACCTTACTGTTACTGCTGGGTTGAAGGAGTACGTTGAGG
TAAAACCGGCCGGGACCGAGTTGTTCCGGAGCCCTATTGTTTCCTTCTTG
TATGAAAGGGGTTGGCGCCAGAATTTTAACCGCAGGGGATTTCCGGGTCC
CGATGAAGAGTTTAAGATGGCTCAGGACTACTTTAAATCCGCCGAAGGCG
GTGTTTTGGTGGATGTGAGCTGTGGCAGCGGCTTGTTTTCGAGGAAGTTT
GCGAAATCGGGGACATATTCTGGAGTTGTTGCACTTGATTTTTCGGAGAA
CATGCTTCGGCAGAGTTATGAATTTTTTAAGAGAGATCCTACTCTTTTAG
ATACTAATCTTGCCCTTGTGAGGGCGGATGTTGCTAGGCTTCCGTTCCCT
TCGGGTTCAGTTGATGCTGTCCATGCTGGCGCAGCATTACATTGTTGGCC
TTCTCCTTCCAATGCYATTGCTGAAATAACTCGCATATTACGAAGTGGTG
CTGTCTTTGTCGGAACCACTTTTCTGCGGTATACTCCATCTACTTCCTGG
ATACCCCGGCAACTCAKAGAGAGGGCTCGTCAGAGCTATAACTATTTAAC
GGAGGAGGAGATTGCAGACTTGTGTACATCATGCGGTCTCACCAACTACA
CGAGCAACGTTCAACAATCCTTCATCATGTTTTCTGCTCAGAAACCTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013216	Methyltransf_11

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity