MDP0000232174, MDP0000232174 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000232174
Unique Name	MDP0000232174
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	11374

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr10	chromosome	chr10:11911295..11922668 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC017852.266	contig	MDC017852.266:15558..26931 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000232174_exon_1	MDP0000232174_exon_1	Malus x domestica	CDS
MDP0000232174_exon_2	MDP0000232174_exon_2	Malus x domestica	CDS
MDP0000232174_exon_3	MDP0000232174_exon_3	Malus x domestica	CDS
MDP0000232174_exon_4	MDP0000232174_exon_4	Malus x domestica	CDS
MDP0000232174_exon_5	MDP0000232174_exon_5	Malus x domestica	CDS
MDP0000232174_exon_6	MDP0000232174_exon_6	Malus x domestica	CDS
MDP0000232174_exon_7	MDP0000232174_exon_7	Malus x domestica	CDS
MDP0000232174_exon_8	MDP0000232174_exon_8	Malus x domestica	CDS
MDP0000232174_exon_9	MDP0000232174_exon_9	Malus x domestica	CDS
MDP0000232174_exon_10	MDP0000232174_exon_10	Malus x domestica	CDS
MDP0000232174_exon_11	MDP0000232174_exon_11	Malus x domestica	CDS
MDP0000232174_exon_12	MDP0000232174_exon_12	Malus x domestica	CDS
MDP0000232174_exon_13	MDP0000232174_exon_13	Malus x domestica	CDS
MDP0000232174_exon_14	MDP0000232174_exon_14	Malus x domestica	CDS
MDP0000232174_exon_15	MDP0000232174_exon_15	Malus x domestica	CDS
MDP0000232174_exon_16	MDP0000232174_exon_16	Malus x domestica	CDS
MDP0000232174_exon_17	MDP0000232174_exon_17	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000232174	MDP0000232174	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000306	Zinc finger, FYVE-type	PFAM	PF01363	FYVE	coord: 1081..1147 score: 1.2
IPR000306	Zinc finger, FYVE-type	SMART	SM00064	Protein present in Fab1, YOTB, Vac1, and EEA	coord: 1079..1148 score: 3.7
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 758..774 score: 1.6e-13coord: 808..824 score: 1.6e-13coord: 849..865 score: 1.6e-13coord: 865..879 score: 1.6e-13coord: 966..984 score: 1.6e-13coord: 1024..1045 score: 1.6
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 756..804 score: 4.2e-10coord: 807..858 score: 9.9e-08coord: 862..911 score: 9.2e-13coord: 927..973 score: 6.6e-09coord: 976..1025 score: 7.3e-06coord: 1030..1074 score: 2.8
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 901..911 score
IPR000408	Regulator of chromosome condensation, RCC1	PROFILE	PS50012	RCC1_3	coord: 697..755 score: 9.097coord: 756..807 score: 14.926coord: 808..862 score: 14.926coord: 863..914 score: 12.956coord: 925..976 score: 12.253coord: 977..1028 score: 11.971coord: 1029..1080 score: 14
IPR009091	Regulator of chromosome condensation/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30	no description	coord: 695..1080 score: 1.6
IPR009091	Regulator of chromosome condensation/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 697..1084 score: 6
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 1080..1170 score: 2.9
IPR011993	Pleckstrin homology-like domain	GENE3D	2.30.29.30	no description	coord: 490..606 score: 1.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 1081..1148 score: 1.8
IPR013591	Brevis radix-like domain	PFAM	PF08381	BRX	coord: 1468..1500 score: 1.1
IPR013591	Brevis radix-like domain	PROFILE	PS51514	BRX	coord: 1469..1523 score: 13
IPR013591	Brevis radix-like domain	PFAM	PF08381	BRX	coord: 54..78 score: 6.3
IPR017455	Zinc finger, FYVE-related	PROFILE	PS50178	ZF_FYVE	coord: 1085..1147 score: 11
IPR023210	NADP-dependent oxidoreductase domain	GENE3D	3.20.20.100	no description	coord: 56..385 score: 1.6
IPR023210	NADP-dependent oxidoreductase domain	PFAM	PF00248	Aldo_ket_red	coord: 69..387 score: 1.3
IPR023210	NADP-dependent oxidoreductase domain	SUPERFAMILY	51430	NAD(P)-linked oxidoreductase	coord: 55..383 score: 4.4
None	No IPR available	COIL	coil	coiled-coil	coord: 1277..1319 score
None	No IPR available	PANTHER	PTHR22870	FAMILY NOT NAMED	coord: 500..
None	No IPR available	PANTHER	PTHR22870:SF25	REGULATOR OF CHROMOSOME CONDENSATION-RELATED	coord: 500..
None	No IPR available	SEG	seg	seg	coord: 25..37 score: NAcoord: 676..689 score: NAcoord: 1252..1275 score: NAcoord: 1417..1431 score: NAcoord: 1516..1529 score
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 485..598 score: 1.5
None	No IPR available	SEG	seg	seg	coord: 25..36 score
None	No IPR available	SEG	seg	seg	coord: 80..108 score
None	No IPR available	SEG	seg	seg	coord: 2..30 score
None	No IPR available	SEG	seg	seg	coord: 108..121 score
None	No IPR available	SEG	seg	seg	coord: 3..17 score
None	No IPR available	SEG	seg	seg	coord: 29..41 score
None	No IPR available	SEG	seg	seg	coord: 51..63 score
None	No IPR available	SEG	seg	seg	coord: 28..39 score
None	No IPR available	SEG	seg	seg	coord: 38..53 score
None	No IPR available	SEG	seg	seg	coord: 2..14 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:11911295..11922668+
mRNA from alignment at MDC017852.266:15558..26931+
coding sequence from alignment at MDC017852.266:15558..26931+

mRNA sequence

>MDP0000232174 ID=MDP0000232174; Name=MDP0000232174; organism=Malus x domestica; type=mRNA; length=11374bp
ATGGCATTGGCCTCGTGCTCCACCACCTTTCTCTGCAACCACGCAGCGGC
AGCGGCACCGTGGTCACATCCCAGAACTAGACCCAGAAGCTTCCGGGGGC
GGAGGAGCTCCATTATCAAAGCAACCGTCACCACCGGTGCCAAGCAAAAC
CTGAAGACCCCATTGCAGTACAGGAAGCTCGGGGACTCGGACCTTGTAAT
TAGYGAAATCACTCTCGGAACCATGACATTCGGCGAGCAAAACACAGAGA
AAGAAGCTCATGAGATTCTCAGCTACGCATTTGAAAATGGGATTAACGCA
TTGGACWCTGCCGAGGCTGTGAGTGATTGTGAATTGCTTGATTAATGGCC
TCAATTGTGCTTTGTTTAGTTTCATTTCGCTTTATCTCGGTTTTGATTAA
AGTTTAAATCTTTGCTGTTGCAGTACCCAATTCCCATGAAGAAGGAGACA
CAGGGGAGCACTGATCGCTACATTGCCAGTTGGCTCAAGTCTCAACCCCG
TGATAAGGTATTCGGACATGTTATGTTGCGAGATTTGCAGTAAGAATGTT
GTGGACGAGGTGCAAGTATTATCGCAATYTAATAACATAACATGCTAAAT
ATATTGCAAGAGATAGATKTTGTGTTTCTAACTCAATAATATTTTCCAAA
TAGGTTGTTTTGGCAACAAARGTAGCTGGCTATTCAGAGAGGTCAAGTYA
TTTGCGTGACAATGCCACGGTTTTGCGGGTGGATGCAGCAAACATTAGAG
AAAGTGTAGAGAAAAGCCTAAAGCGCCTTGGGACAGATTACATTGATTTA
ATACAAATTCATTGGTAAGTTTATCGACCAAATTCCACACGTTATACAAG
CTTTAACATACTTTTTTCTGTAAGAAGAAACAACCTTTTCACGTTTTTTA
TTTACTTTTCGTTTCACCTTCTCCTAATTCAGCAATGAAGCCAACCATTC
TGCTTGAGAACCCTTTTTGGATATGCTTGTCCATTTTGTGTGTTAAATTC
ACAAGTAACTTGTAGTAAATAAATAACTTGAATGATTACATTGGAAACTC
ATTAATTAACCCAGTTTGGGAGYGCAAGAAGTGATGATAATAAAAAGAGA
ATAACATGAAAAATATATTTTCTCCGTTCGTTTTGTCTGAAATCCATCCA
AGAGTACTCACATTTTAGAAATCAAATATTAGCTGAAATAATTACTATTC
GTAGAAATTAGAACCACTTAAATACAGGGTAAAGACGAATCAAGCTAAAC
CAAGAACACATGTTTAATGTGTTGGAATGCCACATTAACATGTTTTCCTT
CCCTTTTCAGAAGASAATCTGGATCTTAAGTTGTTTAATGTGGTGGTTCT
CGTAAAATAAAATAATTTCTTTTATGCAGGCCAGATCGCTATGTGCCATT
ATTTGGTGGGTATTCATATGATTTTTCAAAATGGAGGTCAAGTGTACCAT
TCGTGGARCAACTAAAGGCTTTTCAAGAACTCATTGACGAAGGAAAGGTA
ACATAACAATTCAAACCAATGTTTTAAAAGGCTTGCCTCAGAGYGCGCCT
AGGCACCCTCTGAGGCTGGGCTTGAGGGTTGYCGCCTCTGTTTTGAGGGA
GTGGGCGTAAGGCTTCGCCAGAGCCGCCTAGGCAGCGGAAGGCGCGCCTC
AGGGCTTTTTTTTTTTTTTTTTTTTTTTTAAACTCCMAAACCCAAATTTT
GGGTAGGGTTTTAGCTGCTTCTCTTCCTTGCACTATCGTCTCTTTGCCTT
TTTTTCCGATTTTTATTTTTAATATAACGGATATGTGTGCTGTCTGTGTG
CATTGTTATATGTCTGCTCATTGTGCTTTTCATCCTCTATTTTATACATA
CATATATATATATAATATATGTATGTGCTTAGGGTGATTATTGGTTAATA
ATCTTTTTTTTTAATATAATATATATGTACGCTTTGTGTATATATTAAAA
AATTTAGGTCCCGTGAGGCGACGCCTAGGCCGGGCTATCCCTTGGACGCC
TCGCCCACGCCTGACACTTTTAATACACTGATTCAAACCAATGAAAGTTT
TGACTTTCAGGCTCAATATTAAAGCACTTGGAATGAGAAGTGGAAGTTAG
ATACAAATTATTAAATTTTTCAAGACCTGTTGTAATGTGGATTGGAAAAA
TAGTATCATAGTGTTCGTGAGTTTKTTTGTAAGTGAATCACTMGCCGCAA
CTGCATCGATTTAGATGAAACATATTGTTGTCCTATGAATTGGTATACTT
ATAACTGGAGGAAGAGTGAATCTTTGATTCTTGAATATTCAAGTTCTTAG
ATGATTAATGAGTGTTGTTAAATAAATGGAGTGTCACCAGTTCTGTATAG
CTTGAAATTCTAAGCTTTTTAACTTACATGTTATATAATCCTTTTGAACT
TTATAGGTACGCTACATTGGTGTTTCTAATGAGACTTCATATGGAGTGAT
GGAATTTGTACATGCAGCTAAAGTTGAAGGGCTACCAAAGATAGTCAGTA
TCCAAAACAATTACAGTCTTCTAGTTAGAACTCATTTTGAAAGTAAGTCA
CATACCGTGMGGAGTGAAATATTACTTGACAATAAAAGTTTCTGTTGATA
TTTCTCTTTAGATGGTTATTCTTGTACCAACTGTTTGATAGGTTACCTAT
CATGTGAATATGCTAGTTGATATATCAGATTATGTTCTGAGATAAGTTTT
ATCTAARGTGGTAGGGGAAATGTCCTCCATTKTCATTGATTACTWGTTAC
AAGCTGATCCATGAGCCACACTTGAGCAATATGATTAAGTTAGATGAATG
CCTGCTGTCAGTTTGTTTTCATTTCTTTAACTAATCTTTGATAACTTGTT
GACATTACACRACTTGACTTGTTTGAGTGTTAATTATATTTGCTTGACCG
ATAGCTGCTCATTTGATGGATGTCGACCTGGTTGGGCTGTCTATCCAGAT
TCCAACCTGTTTCYTTAAATGTCGGCMCCTTTGTAGTGTGTGTTGAGAGT
TTTTAGTGTTTACCTTCTCCCTTCTAGTTTCCCATGTTATTCTCTTAGCC
CAATGAGTTTGTAATTCTTTTGTTGATTCTTTGCAGTTGACCTTGTTGAA
GTCTGCCACCCACAAAATTRCAACATTGGCTTGYTGGCTTATTCTCCACT
GGCTGGTGGATCACTGAGTGGGAAGTACATAGATAGCWCTTCCGAAGCTT
CAAAAAAAGGGAGGCTAAACCTCTTCCCCGGCTACATGGAAAGATATAAC
AAATCTTCTGCTAGGGTATGTTAATATCTTGCATGTCGTAGAGTGTAGAT
CATGTAAAACGTGGCTAAATCCAAATAACATGCATATTATAKAGTTATTT
TATAATCTTAGAAACAGATGAACTCCTTTGATGTGGGGATTTATCATCAC
GGTGTCACATTRTAATTTTGTTGGGGAACAGCAGATTGTTTACAGGGACT
TTTCGTCACTTGGGAAGCAACTTGTTTAYTGTTTGAGTAAAACATTTTCG
AACTGCTATATGTTCGCCAAATATTGATAAAATTTGCATTTTCTGCAATT
AAAGGCCTGGAAGTTAGGACTTAGGAGTGCTAGGCTTAGCACCATATTTA
ACCAAGTTTTAAAGCAAGGTTGAAAAGTGTTTGGTTACCACCCACAACRC
GCAGATTGTTTCGCACGTGATTAAAAACCTTGGCTGATCTTCCGAGTATG
AAATTAACTTTGGACACCGGGGTCTTTTGGACGTAGGCTGTTTTCCGTTC
TTGATGAGTTACTTTATGTTTTGAATATGAATTGCTGAGGATAATTTCAT
TACTGCTGATTGGTTGTCTGCCTAATTATTACTTGTTTCTGTTTTTAGGA
AGCAACAATAAAGTACATCGAGCTAGGCAAGAAGTACGGGCTAACTCCAG
TTCAGCTTGCACTTGGATTTGTACGGGACCGTCCATTTGTGACAAGTTCA
ATCGTTGGTGCAACTTCTGTCACCCAACTGAAGGAAGATGTTGATGCTTT
TGTGTTGACTGAGAGGCCTTTACCACAAGAAGTGATGGCTGATATTGAAG
AGATTTTCAAGAGATACAAAGACCCTACCATTTGAAAAAGTGGCCTTAGG
AAGTGTAATTATTACTTTTCTTGAAACATCAGCTTAAGATAATGATCGAA
CGTCGATGRTATCCCTTGTTGACGTGGGCAATTCCGATTTTGCGGTGACC
AAAAAACATGAGAGAAGGAAGCCTCAACTTCCCTTTTGGGGTCATTATGC
ATCCTTGTAGTTTTTCTTSTGTATTTTCCTYCAATGTGCAGAGAGTCTTG
TTTCTGTGCTTTGATTGAACCTTGTATATTTTCCTCCAAATGAGAGCCTG
GATCGCATATATCTGAGTTATGGATAGAAAGTTAGGAGATTGTCAAYTTT
GATCTGCGAATTTCAGRTTCTTGCATGAAGTTCGTGATTTCTGGAAGAAG
AGTCCTTGAGTTCTAATCCGTCGAAGARGAGTGTCCTTCGAGTTGTTGGC
RAAGGATTCCGACCGATGATRGTCGTGCACCTTCAASAGTCTCTTCACAT
TATTCTTCCARAGCATCATCGCCAAATCCATGTTGCARKGAATTATGCCT
TCCTCCATCTGCCCCTGTTTATTCTTCACTTTCCGTATCAASCCACGTGG
CAGACTCAGGTTGAGTGTAGTATTTTTTTACTAATATATTTTTGAAAAGT
AGTTTAACTCGTTGGTGGGACGTGGAGGAAGAGAAAGAGGCGCGCCAATR
TCTCGCCTTCTTTTCTTTTGACCTGCAAACTATCCTAAACATGTGAGATC
GCTTACTGCCCTCTCATTTCCCACTCCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCWCYCYYCCCCCCCYCTCTCTCTCWCTCTGATTGATCTGC
ATTGTCTTCAGGGTCAMTCTGCAAGACCCAATTCGCCAAAGCGCTCAGAA
ACTCGATATTCACATCTTTGCAGAATTTTCCGGTGAATATATGAGGCKGT
TGAYYGATTTCCGTGAGATTTCGTCAGGAKGGCCGCTTTGCAATTGGGGA
AGYTWTTGATTTCCGACAAGTTGGTGGCCGATTGAGGTTCCCAAGTTTTT
TGTTTTGGGARTGTATATGGTTCTTGTTTAGAAGGATACTAGGAATTTTG
ATGAGAGGCCAAACYGGGAGAAAGCATAKGCATCTATGAAGACTGGTGAA
GGGAAGTCGCCGATGCAGTTGTCGGTTGAGCTTGCTTCTTCTTCGGCGTT
TAATTCCTTACGAAAATTTCAGATGGAATGGCAGATCCTGCTAGCTATGG
GAATCATGAGCGTGATATTGAACAAGTCRGTTTCCYATCACYGCCCTCTT
TTCTTTTCCTTTAGATTATTTGGTGTTTGGTTTTGTTTGCCTAGAAAACA
AAGAGACCTCGTACATTTTCGGGTTTGCATACATTTTTGTGTTTTACTCA
CCCTCTTACGTTTTCTTTCCGAAAACACGGTAATTGAATGAAATTTTGGT
CAGACTGTTATTTTTTGACGATACGGTTATAACTGTAATAGGTAGATYAA
TGCGTATGTATATTGAAATTGCTACAAAACCAATTCTAATGAGACAAAGA
AAAATGTAAATGCTAGTATTTTGCTAAGTTTTCAACTAATGAAGGATGAC
ATAGAGGAAAAAGAGACTCGAATTGTGWCGTCGAACTAAGAATTTAATGG
ACTACACACTCAAAAAGGAGAGGAGGAGGATGAAACTAGCATCTATATGT
ATRAATATTTCGATTAAAAAGCCCTTTTTCTCGTACACTGAGCATCTTTC
TCCTTTGAARCTACCTGCATCACTCGAACAATTTGCTTTTCRATTCAAGA
AGGGAATTGATGAAAACMCAATATCTTTGTACAAAATTTAATTTCTAGCA
GTGAAAATGTTGCCTTTTCTTCAGACTACACCCTTTCACACTATMATTTT
GATMTGGTTAAATATATATATATTCAAGATTTTGATCYGTGTGTTCTTTG
GCAGTACTTTTCGCCTAATATTCCTSTCTGTTTCTCATGAAGGCACTCAC
TGCATTAAAAAAAGGTTCCCAGTTAATCAAGTATAGCCGGAAAGGGAAGC
CAAAACTTTGTTCATTCAGAATTTCTACTGTGAGTAATTTCCYTTACTTA
TCTTAATTCTTAACCACTTGAATGCGTTTTTTATGTTACACCTTCTTCCT
GCTGCGCATCTCCACAATCATTACKACATATCTTAACCGCTTGAATGGCT
TCAATTTTCATATTMTTAACAGGATGAAACTACACTAATCTGGTATTCAC
ATGGAGAAGAACGAACTGTGAAATTAGCTTCTGTCTCTCGAATTATCCCT
GGRCAGAGAACGGTGAGTTAAACAAAACTCCCAAGAAATAATTGATATTG
TGGTGTTTCAAATTTTTTGATTGTGCATCTATATAATTTTGAAATGCTGT
TGTGTCCTAGTTGACAGAATAAATACTTTTACTGCTTCTTTATAGGCTGT
ATTTAGAAGGTATTTGCGCCCAGAAAAGGATTACTTGTCATTTTCTCTTC
TATATAACAACGGTGAACGAACACTTGATCTGGTAAGTAAAATCAAGTAT
TAGTTTCAAATTTTTCTGCTACGGTGAGTTTAGACGAAAAGTWTAAACTC
AGCAATCATCTTTATAGATCTGCAAGGACAAAGCTGAGGCAGAGGTATGG
TTTGCTGGCCTYAAGGCACTAATTACTTCAGGACAACAACGTAGTAGACG
TACTAAGAGTGATATTTATGATGTAAGTTTCTATTTTAACAAAACGCATT
TATAACTGCTTATATTTGTACTTGTTTTTATGGTTCCTAGTTCTTTCTTA
TCGTTCGAATGGTTAATTTTGTAATGACTATAATAAATTAGTTGATACGA
GTTTTTGCCCTCAAAAAGGGCTGAATATTTCTTGTGAAATTACCTGCAGA
TGGTGAGAAAATATCTGCCACACAATTGCATGACAATCATTATATATTTA
TTTGTTTGTCATTTAGTCTGCTGTTTACTAAATTATGAACATTCATCGGC
ATGAAATAAAAAAGGAAACTTTTAMGCAATATGTATTAGAGTTACGTATT
CTAGTAAAAARTAKATGTACCATTTACTGATACAATAAATTGTGGCAAAT
TATTACAACCCTGAGAYGACAGATACAGGTTTTTGCCTCTCAAGCCTTTG
AAAAAAAYATACGGAAAACTATCCAGGAAGTAGAGTGGTATGGGATGTCT
AGCAATTGCAGATGAAACWTAGCCCTCACCATATTCAGGAACATTAATTT
TTCTTGGAGATAAGATTTGACATATGGAGCCGCTGGAATTTAAGTTATGT
AAATAAAAGAATAGTTAAAATTCCATGAAATCGAYAACTATGAACTGGAA
CTATGAACTGGAGATTCTGTAAACATACAATTATATACAATTTAGAAAAT
TATTARTGCATTAACATATTTGGTAGTTTCCTTCATATGATTCATGGATT
ATGAGAAACTGCCAGCACTTATATTGACAAAGTAAATGTGGCGCAARTGT
CTTGATCCACTCAGAATTGTTCTGCRTTAATATGTTTTCAGAAGATTCAA
TGTAGTTGCTTGCTTTACTTTCAGYTGCAAGACTGTGCTGAATCTGTTAA
TGGTCGTCCTTTTGGTGCGGCCTTAGAKTTCACTTCRAGCATTGCCCGTG
GTAGGGGATCTGTTGATTCTCGTGAATCAGTGAATTTTTCAGGCTCAGAT
GTGGGTTCAGAACSTGCAAATATGCAACTAAGAACAAGTGCAGGAGATGG
TTTTCGAATTAGTGTTTCAAGCACTCCTAGCTGTTCAAGTGGAGGGTCTG
GACCTGATGACATTGAATCACTAGGAGATGTTTATGTTTGGGGAGAGATC
TGGTCTGATGGAAATGGACCTGATGGGTCCACGAATTCAATCCCTACAAA
AACCRATGTGCTGATTCCAAAGCCCTTGGAGTCGAATGTTGTTCTTGATG
TTCAGCAGATAGCTTGTGGTGTGCGACATGTTGCTCTTGTAACAAGGCAA
GGGGAGGTTTTTACCTGGGGAGAGGAATCTGGGGGAAGACTTGGTCATGG
GATTGATAGAGACTTTAGTTGTCCTCGCCTTGTTGAGTTCCTCGCAATTA
ATAACATTGAATTTGTTGCATGTGGTGAGTACCACACATGTGCTGTATCT
ACGTCAGGTGATTTGTTTACGTGGGGTGATGGTACACATAATGCTGGACT
TCTTGGTCTTGGAACAGATGTTAGCCACTGGATACCTAAAAGGGTTACCG
GTCCTTTAGAAGGACTTCAGGTTYTATCTGTTGCGTGTGGCACGTGGCAT
TCAGCTTTGGCAACTTCAAATGGAAAGCTGTTCACGTTTGGAGATGGAGC
GTTTGGTGTTTTGGGCCATGGAGATCGAGAGAGTGTTCTGTATCCAAGGG
ATGTACAGTTGTTGAATGGACTAAAGACGATAAAAGTAGCATGCGGAGTT
TGGCATACTGCAGCAATTGTAGAGGTTATGGGCCAGTCTRGTGCAAATGC
TTCATCTCGTAAGTTGTTCACCTGGGGTGATGGTGACAAACATYGTTTGG
GTCACRGAAGCAAGGAAACTTATCTGCTTCCCACCTGTGTCTCTTCACTT
ATTGACTATAATTTCCACCAGCTAGCATGTGGACACACTATGACTATTGC
CCTCACCACATCAGGTCATGTGTTTACCATGGGCGGAACTGCTTATGGTC
AGCTAGGCAATCCAACTTSTGACGGGAAAGTACCTTGCTTAGTACAGGAT
CGATTGATTGGTGAGTTTGTCGAAGAAATATCTTGTGGGTCATATCATGT
TGCYGTCCTGACATCAAGAAGTGAAGTGTTCACTTGGGGAAGAGGGGCTA
ATGGAAGACTGGGACACGGGGACACAGAAGACMGGAAAACTCCAACTTTG
GTTGAAGCCCTGAAAGATAGGCATGTGAAAAGCATATCGTGTGGCTCAAA
CTTCACATCTAGTATATGCATCCATAAGTGGGTCTCTGGAGCTGATCAAT
CAATTTGTTCAGGTTGTCGACAGACATTTGGTTTTACKAGAAAGAGGCAT
AACTGTTATAACTGTGGACTAGTCCATTGCCATGCTTGTAGTTCCAAAAA
AGCACTGAGGGCAGCATTGGCCCCGACTCCTGGAAAACCACACCGTGTAT
GTGATGCTTGTTATGCAAAACTTAAAGCTGCTGAGGCTGGTAATGCTTCC
AATGTTAGTAGGAGATCTAYGATCACACGCTCAATGGATAGCAGGGATTT
TCTAAATAGGGGAGAGGTGAAATCTTCAAGGATTCTTCTCTCTYCCACTA
CAGAACCCGTTAAMTACCTTGAGATCAAGTCCATGAAGCCTGGGGGTGTC
AGATCYGAGTCCCCTTCTATAGTCAGGGCTTCCCAAGTTCCATCCCTTTT
ACCACTAAAAGATATTGCGTTTCCAAGTTCATTGAGTGCACTTCAAAACG
CTTTGAAGCCTGTCATGACAATGCTGCCTCAGCCCAATTCAAGATCTACT
TCACCATATTCGAGGAGACCTAGTCCTCCCCGGTCTACAACTCCTATATT
CTCTAGGAGTGTTATYGACAGTCTTAAGAGGACAAATGACACTCTGACTC
AAGAAGTRCTGAAGTTGCAAAACCAGGTACTATTTTACACCTTTYGAAAR
TTMACATTTTTGGTTGCGTCATTATATTGGCTTGTGGTATAGAAATGTCA
AAACCAAGAYGCCTTTCTTTAGGTAAACTTTCCTCTCTTTACCTCAGGTT
AAAAGTCTGAAGCAGAAGTGTGATGCTCAAGATGTAGAGATTCAAAAACT
AAATAAGCATGCCAAAGAAGCTGGCTCATTAGCCAATGAACAATACTCTA
AGTGCAGAGCTGCCAAAGAACTTGTCAAGTCCATCGCTGAACAGGTTTAT
AAAACTTACTCAATATTACAATGTCACTCTTTCTAAYCRTTCTTTGTGGC
ACGAACATTTCCGTTGACAGCATAACAATGACGGGGAAAAGAAAATCTAC
TCTTTTTATGGCCCTGCCATTCAGTTATCGGTGAAATATGCTGATGTTCT
GTGTGCTTTCTGTCCTTTCTTTATCTTGCAGATKAGGGGGTGGGAAGACA
AGATACCTCCTGAGATTTTTGACAGTGATACTTTCAAAGCATTGCGTACG
CAAGCTAAAGATTTTATGAACATGARTATTGGAAGCTCAAGCTCAGAGCT
AGGCCAACACTATGMAGCCGATAGAACTTCCTTGGTTGTTGAGTCTTCTA
GAATGGACGACAATAGAGCAGACGACTCTGCAGAGGCTGAACCTCAAAAC
AGCTCAGAAAACCGCTCAAGGTCACCTGAATCATCAACATTGAGGACAGA
AGACAACAGAGCAGAAGACTTTGCGGAGGCTGAACCTCAAAACAGCTCAG
AAAACCGCTTGAGGTCACCTGAATCATCAACGTCGCATAGAGGACAAAAG
GAAGTCATTGAACAATTTGAACCGGGCGTTTATGTAACTCTCCTTCAACA
ACAAAATGGTACTAGGATTTTTAGGCGTGTTAAATTCAGGTAAATATTTG
ATCTTATAACATTCAGTAATTATATGTTTGTGTTAGACGGCCACTGGACC
CTCGAGCTTTTGGGGTTCAGTGGTTGTCTAACACTGTATCAGAGCTCTTG
TTGCACGAGGTCCTGAGTTCAAAACTTCCGATCCTCATTCCCCACTGCTT
TCTTCATTTTCAAGCTGCACACTGGGATTGCACCTATGTGTTTCTGTGTC
TTCATTCTTTGCCTCTCCACGTGCAGAATGTGGCTGCACGTGAGTGAACG
TGTTAGCTAGATATATAATGTTGACTCGTTATCTAACAGCTTAAACTTAT
GGGGTTCAGTGTCTACGATGCCATATTACAACTAATGGATCTCAAAAGTT
TAAGCTGTTTGCAAACTGATCAACAATGTATATCAAGCTTACGATCTACA
CATGTACCCGTACTAATTGAAACAAAACTTGTTATAAATTATTATCAGAA
AGCCATTTTGTTTTGTGTTTCGTTTATTTTCCATATGCTAACTTTGTTTA
TGATAAGCGTAACACACAACAAAGTCTTGGATCATTTCAATGCAGTTCTC
TTCTAATTTTCTCACACCGGTCTCAAATATTTTCTGCAGCAAACGAAAGT
TTAGTTCGGAACAGGCAGAAGCATGGTGGAAAAATAACAAAGATAGGCTG
CTTAGGAGATATAGTCAGCCGAGTGCAAGTCCTGCTCCGAGTGTACCACC
ACCCAGCAGTCCTGTACCGCCGGAGGAAAACAGCGAGGCAGCCGCAGCTT
CCCCGACTTAGTTTCATAACTTAG

protein sequence of MDP0000232174

>MDP0000232174 ID=MDP0000232174; Name=MDP0000232174; organism=Malus x domestica; type=polypeptide; length=1627bp
MALASCSTTFLCNHAAAAAPWSHPRTRPRSFRGRRSSIIKATVTTGAKQN
LKTPLQYRKLGDSDLVISEITLGTMTFGEQNTEKEAHEILSYAFENGINA
LDXAEAYPIPMKKETQGSTDRYIASWLKSQPRDKVVLATKVAGYSERSSX
LRDNATVLRVDAANIRESVEKSLKRLGTDYIDLIQIHWPDRYVPLFGGYS
YDFSKWRSSVPFVEQLKAFQELIDEGKVRYIGVSNETSYGVMEFVHAAKV
EGLPKIVSIQNNYSLLVRTHFEIDLVEVCHPQNXNIGLXAYSPLAGGSLS
GKYIDSXSEASKKGRLNLFPGYMERYNKSSAREATIKYIELGKKYGLTPV
QLALGFVRDRPFVTSSIVGATSVTQLKEDVDAFVLTERPLPQEKDTRNFD
ERPNXEKAXASMKTGEGKSPMQLSVELASSSAFNSLRKFQMEWQILLAMG
IMSVILNKSVSXHXPLFFSFRLFGVWFCLPRKQRDLVHFRALTALKKGSQ
LIKYSRKGKPKLCSFRISTDETTLIWYSHGEERTVKLASVSRIIPGQRTA
VFRRYLRPEKDYLSFSLLYNNGERTLDLICKDKAEAEVWFAGLKALITSG
QQRSRRTKSDIYDXQDCAESVNGRPFGAALXFTSSIARGRGSVDSRESVN
FSGSDVGSEXANMQLRTSAGDGFRISVSSTPSCSSGGSGPDDIESLGDVY
VWGEIWSDGNGPDGSTNSIPTKTXVLIPKPLESNVVLDVQQIACGVRHVA
LVTRQGEVFTWGEESGGRLGHGIDRDFSCPRLVEFLAINNIEFVACGEYH
TCAVSTSGDLFTWGDGTHNAGLLGLGTDVSHWIPKRVTGPLEGLQVXSVA
CGTWHSALATSNGKLFTFGDGAFGVLGHGDRESVLYPRDVQLLNGLKTIK
VACGVWHTAAIVEVMGQSXANASSRKLFTWGDGDKHXLGHXSKETYLLPT
CVSSLIDYNFHQLACGHTMTIALTTSGHVFTMGGTAYGQLGNPTXDGKVP
CLVQDRLIGEFVEEISCGSYHVAVLTSRSEVFTWGRGANGRLGHGDTEDX
KTPTLVEALKDRHVKSISCGSNFTSSICIHKWVSGADQSICSGCRQTFGF
TRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDACYAKLKAAE
AGNASNVSRRSXITRSMDSRDFLNRGEVKSSRILLSXTTEPVXYLEIKSM
KPGGVRSESPSIVRASQVPSLLPLKDIAFPSSLSALQNALKPVMTMLPQP
NSRSTSPYSRRPSPPRSTTPIFSRSVIDSLKRTNDTLTQEVLKLQNQVKS
LKQKCDAQDVEIQKLNKHAKEAGSLANEQYSKCRAAKELVKSIAEQXRGW
EDKIPPEIFDSDTFKALRTQAKDFMNMXIGSSSSELGQHYXADRTSLVVE
SSRMDDNRADDSAEAEPQNSSENRSRSPESSTLRTEDNRAEDFAEAEPQN
SSENRLRSPESSTSHRGQKEVIEQFEPGVYVTLLQQQNGTRIFRRVKFRR
PLDPRAFGVQWLSNTVSELLLHEVLSSKLPILIPHCFLHFQAAHWDCTYV
FLCLHSLPLHVQNVAAPNESLVRNRQKHGGKITKIGCLGDIVSRVQVLLR
VYHHPAVLYRRRKTARQPQLPRLSFIT

mRNA from alignment at chr10:11911295..11922668+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000232174 ID=MDP0000232174; Name=MDP0000232174; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr10:11911295..11922668+ (Malus x domestica

mRNA from alignment at MDC017852.266:15558..26931+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000232174 ID=MDP0000232174; Name=MDP0000232174; organism=Malus x domestica; type=mRNA; length=11374bp; location=Sequence derived from: MDC017852.266:15558..26931+ (Malus x domestica
ATGGCATTGGCCTCGTGCTCCACCACCTTTCTCTGCAACCACGCAGCGGC
AGCGGCACCGTGGTCACATCCCAGAACTAGACCCAGAAGCTTCCGGGGGC
GGAGGAGCTCCATTATCAAAGCAACCGTCACCACCGGTGCCAAGCAAAAC
CTGAAGACCCCATTGCAGTACAGGAAGCTCGGGGACTCGGACCTTGTAAT
TAGYGAAATCACTCTCGGAACCATGACATTCGGCGAGCAAAACACAGAGA
AAGAAGCTCATGAGATTCTCAGCTACGCATTTGAAAATGGGATTAACGCA
TTGGACWCTGCCGAGGCTGTGAGTGATTGTGAATTGCTTGATTAATGGCC
TCAATTGTGCTTTGTTTAGTTTCATTTCGCTTTATCTCGGTTTTGATTAA
AGTTTAAATCTTTGCTGTTGCAGTACCCAATTCCCATGAAGAAGGAGACA
CAGGGGAGCACTGATCGCTACATTGCCAGTTGGCTCAAGTCTCAACCCCG
TGATAAGGTATTCGGACATGTTATGTTGCGAGATTTGCAGTAAGAATGTT
GTGGACGAGGTGCAAGTATTATCGCAATYTAATAACATAACATGCTAAAT
ATATTGCAAGAGATAGATKTTGTGTTTCTAACTCAATAATATTTTCCAAA
TAGGTTGTTTTGGCAACAAARGTAGCTGGCTATTCAGAGAGGTCAAGTYA
TTTGCGTGACAATGCCACGGTTTTGCGGGTGGATGCAGCAAACATTAGAG
AAAGTGTAGAGAAAAGCCTAAAGCGCCTTGGGACAGATTACATTGATTTA
ATACAAATTCATTGGTAAGTTTATCGACCAAATTCCACACGTTATACAAG
CTTTAACATACTTTTTTCTGTAAGAAGAAACAACCTTTTCACGTTTTTTA
TTTACTTTTCGTTTCACCTTCTCCTAATTCAGCAATGAAGCCAACCATTC
TGCTTGAGAACCCTTTTTGGATATGCTTGTCCATTTTGTGTGTTAAATTC
ACAAGTAACTTGTAGTAAATAAATAACTTGAATGATTACATTGGAAACTC
ATTAATTAACCCAGTTTGGGAGYGCAAGAAGTGATGATAATAAAAAGAGA
ATAACATGAAAAATATATTTTCTCCGTTCGTTTTGTCTGAAATCCATCCA
AGAGTACTCACATTTTAGAAATCAAATATTAGCTGAAATAATTACTATTC
GTAGAAATTAGAACCACTTAAATACAGGGTAAAGACGAATCAAGCTAAAC
CAAGAACACATGTTTAATGTGTTGGAATGCCACATTAACATGTTTTCCTT
CCCTTTTCAGAAGASAATCTGGATCTTAAGTTGTTTAATGTGGTGGTTCT
CGTAAAATAAAATAATTTCTTTTATGCAGGCCAGATCGCTATGTGCCATT
ATTTGGTGGGTATTCATATGATTTTTCAAAATGGAGGTCAAGTGTACCAT
TCGTGGARCAACTAAAGGCTTTTCAAGAACTCATTGACGAAGGAAAGGTA
ACATAACAATTCAAACCAATGTTTTAAAAGGCTTGCCTCAGAGYGCGCCT
AGGCACCCTCTGAGGCTGGGCTTGAGGGTTGYCGCCTCTGTTTTGAGGGA
GTGGGCGTAAGGCTTCGCCAGAGCCGCCTAGGCAGCGGAAGGCGCGCCTC
AGGGCTTTTTTTTTTTTTTTTTTTTTTTTAAACTCCMAAACCCAAATTTT
GGGTAGGGTTTTAGCTGCTTCTCTTCCTTGCACTATCGTCTCTTTGCCTT
TTTTTCCGATTTTTATTTTTAATATAACGGATATGTGTGCTGTCTGTGTG
CATTGTTATATGTCTGCTCATTGTGCTTTTCATCCTCTATTTTATACATA
CATATATATATATAATATATGTATGTGCTTAGGGTGATTATTGGTTAATA
ATCTTTTTTTTTAATATAATATATATGTACGCTTTGTGTATATATTAAAA
AATTTAGGTCCCGTGAGGCGACGCCTAGGCCGGGCTATCCCTTGGACGCC
TCGCCCACGCCTGACACTTTTAATACACTGATTCAAACCAATGAAAGTTT
TGACTTTCAGGCTCAATATTAAAGCACTTGGAATGAGAAGTGGAAGTTAG
ATACAAATTATTAAATTTTTCAAGACCTGTTGTAATGTGGATTGGAAAAA
TAGTATCATAGTGTTCGTGAGTTTKTTTGTAAGTGAATCACTMGCCGCAA
CTGCATCGATTTAGATGAAACATATTGTTGTCCTATGAATTGGTATACTT
ATAACTGGAGGAAGAGTGAATCTTTGATTCTTGAATATTCAAGTTCTTAG
ATGATTAATGAGTGTTGTTAAATAAATGGAGTGTCACCAGTTCTGTATAG
CTTGAAATTCTAAGCTTTTTAACTTACATGTTATATAATCCTTTTGAACT
TTATAGGTACGCTACATTGGTGTTTCTAATGAGACTTCATATGGAGTGAT
GGAATTTGTACATGCAGCTAAAGTTGAAGGGCTACCAAAGATAGTCAGTA
TCCAAAACAATTACAGTCTTCTAGTTAGAACTCATTTTGAAAGTAAGTCA
CATACCGTGMGGAGTGAAATATTACTTGACAATAAAAGTTTCTGTTGATA
TTTCTCTTTAGATGGTTATTCTTGTACCAACTGTTTGATAGGTTACCTAT
CATGTGAATATGCTAGTTGATATATCAGATTATGTTCTGAGATAAGTTTT
ATCTAARGTGGTAGGGGAAATGTCCTCCATTKTCATTGATTACTWGTTAC
AAGCTGATCCATGAGCCACACTTGAGCAATATGATTAAGTTAGATGAATG
CCTGCTGTCAGTTTGTTTTCATTTCTTTAACTAATCTTTGATAACTTGTT
GACATTACACRACTTGACTTGTTTGAGTGTTAATTATATTTGCTTGACCG
ATAGCTGCTCATTTGATGGATGTCGACCTGGTTGGGCTGTCTATCCAGAT
TCCAACCTGTTTCYTTAAATGTCGGCMCCTTTGTAGTGTGTGTTGAGAGT
TTTTAGTGTTTACCTTCTCCCTTCTAGTTTCCCATGTTATTCTCTTAGCC
CAATGAGTTTGTAATTCTTTTGTTGATTCTTTGCAGTTGACCTTGTTGAA
GTCTGCCACCCACAAAATTRCAACATTGGCTTGYTGGCTTATTCTCCACT
GGCTGGTGGATCACTGAGTGGGAAGTACATAGATAGCWCTTCCGAAGCTT
CAAAAAAAGGGAGGCTAAACCTCTTCCCCGGCTACATGGAAAGATATAAC
AAATCTTCTGCTAGGGTATGTTAATATCTTGCATGTCGTAGAGTGTAGAT
CATGTAAAACGTGGCTAAATCCAAATAACATGCATATTATAKAGTTATTT
TATAATCTTAGAAACAGATGAACTCCTTTGATGTGGGGATTTATCATCAC
GGTGTCACATTRTAATTTTGTTGGGGAACAGCAGATTGTTTACAGGGACT
TTTCGTCACTTGGGAAGCAACTTGTTTAYTGTTTGAGTAAAACATTTTCG
AACTGCTATATGTTCGCCAAATATTGATAAAATTTGCATTTTCTGCAATT
AAAGGCCTGGAAGTTAGGACTTAGGAGTGCTAGGCTTAGCACCATATTTA
ACCAAGTTTTAAAGCAAGGTTGAAAAGTGTTTGGTTACCACCCACAACRC
GCAGATTGTTTCGCACGTGATTAAAAACCTTGGCTGATCTTCCGAGTATG
AAATTAACTTTGGACACCGGGGTCTTTTGGACGTAGGCTGTTTTCCGTTC
TTGATGAGTTACTTTATGTTTTGAATATGAATTGCTGAGGATAATTTCAT
TACTGCTGATTGGTTGTCTGCCTAATTATTACTTGTTTCTGTTTTTAGGA
AGCAACAATAAAGTACATCGAGCTAGGCAAGAAGTACGGGCTAACTCCAG
TTCAGCTTGCACTTGGATTTGTACGGGACCGTCCATTTGTGACAAGTTCA
ATCGTTGGTGCAACTTCTGTCACCCAACTGAAGGAAGATGTTGATGCTTT
TGTGTTGACTGAGAGGCCTTTACCACAAGAAGTGATGGCTGATATTGAAG
AGATTTTCAAGAGATACAAAGACCCTACCATTTGAAAAAGTGGCCTTAGG
AAGTGTAATTATTACTTTTCTTGAAACATCAGCTTAAGATAATGATCGAA
CGTCGATGRTATCCCTTGTTGACGTGGGCAATTCCGATTTTGCGGTGACC
AAAAAACATGAGAGAAGGAAGCCTCAACTTCCCTTTTGGGGTCATTATGC
ATCCTTGTAGTTTTTCTTSTGTATTTTCCTYCAATGTGCAGAGAGTCTTG
TTTCTGTGCTTTGATTGAACCTTGTATATTTTCCTCCAAATGAGAGCCTG
GATCGCATATATCTGAGTTATGGATAGAAAGTTAGGAGATTGTCAAYTTT
GATCTGCGAATTTCAGRTTCTTGCATGAAGTTCGTGATTTCTGGAAGAAG
AGTCCTTGAGTTCTAATCCGTCGAAGARGAGTGTCCTTCGAGTTGTTGGC
RAAGGATTCCGACCGATGATRGTCGTGCACCTTCAASAGTCTCTTCACAT
TATTCTTCCARAGCATCATCGCCAAATCCATGTTGCARKGAATTATGCCT
TCCTCCATCTGCCCCTGTTTATTCTTCACTTTCCGTATCAASCCACGTGG
CAGACTCAGGTTGAGTGTAGTATTTTTTTACTAATATATTTTTGAAAAGT
AGTTTAACTCGTTGGTGGGACGTGGAGGAAGAGAAAGAGGCGCGCCAATR
TCTCGCCTTCTTTTCTTTTGACCTGCAAACTATCCTAAACATGTGAGATC
GCTTACTGCCCTCTCATTTCCCACTCCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCWCYCYYCCCCCCCYCTCTCTCTCWCTCTGATTGATCTGC
ATTGTCTTCAGGGTCAMTCTGCAAGACCCAATTCGCCAAAGCGCTCAGAA
ACTCGATATTCACATCTTTGCAGAATTTTCCGGTGAATATATGAGGCKGT
TGAYYGATTTCCGTGAGATTTCGTCAGGAKGGCCGCTTTGCAATTGGGGA
AGYTWTTGATTTCCGACAAGTTGGTGGCCGATTGAGGTTCCCAAGTTTTT
TGTTTTGGGARTGTATATGGTTCTTGTTTAGAAGGATACTAGGAATTTTG
ATGAGAGGCCAAACYGGGAGAAAGCATAKGCATCTATGAAGACTGGTGAA
GGGAAGTCGCCGATGCAGTTGTCGGTTGAGCTTGCTTCTTCTTCGGCGTT
TAATTCCTTACGAAAATTTCAGATGGAATGGCAGATCCTGCTAGCTATGG
GAATCATGAGCGTGATATTGAACAAGTCRGTTTCCYATCACYGCCCTCTT
TTCTTTTCCTTTAGATTATTTGGTGTTTGGTTTTGTTTGCCTAGAAAACA
AAGAGACCTCGTACATTTTCGGGTTTGCATACATTTTTGTGTTTTACTCA
CCCTCTTACGTTTTCTTTCCGAAAACACGGTAATTGAATGAAATTTTGGT
CAGACTGTTATTTTTTGACGATACGGTTATAACTGTAATAGGTAGATYAA
TGCGTATGTATATTGAAATTGCTACAAAACCAATTCTAATGAGACAAAGA
AAAATGTAAATGCTAGTATTTTGCTAAGTTTTCAACTAATGAAGGATGAC
ATAGAGGAAAAAGAGACTCGAATTGTGWCGTCGAACTAAGAATTTAATGG
ACTACACACTCAAAAAGGAGAGGAGGAGGATGAAACTAGCATCTATATGT
ATRAATATTTCGATTAAAAAGCCCTTTTTCTCGTACACTGAGCATCTTTC
TCCTTTGAARCTACCTGCATCACTCGAACAATTTGCTTTTCRATTCAAGA
AGGGAATTGATGAAAACMCAATATCTTTGTACAAAATTTAATTTCTAGCA
GTGAAAATGTTGCCTTTTCTTCAGACTACACCCTTTCACACTATMATTTT
GATMTGGTTAAATATATATATATTCAAGATTTTGATCYGTGTGTTCTTTG
GCAGTACTTTTCGCCTAATATTCCTSTCTGTTTCTCATGAAGGCACTCAC
TGCATTAAAAAAAGGTTCCCAGTTAATCAAGTATAGCCGGAAAGGGAAGC
CAAAACTTTGTTCATTCAGAATTTCTACTGTGAGTAATTTCCYTTACTTA
TCTTAATTCTTAACCACTTGAATGCGTTTTTTATGTTACACCTTCTTCCT
GCTGCGCATCTCCACAATCATTACKACATATCTTAACCGCTTGAATGGCT
TCAATTTTCATATTMTTAACAGGATGAAACTACACTAATCTGGTATTCAC
ATGGAGAAGAACGAACTGTGAAATTAGCTTCTGTCTCTCGAATTATCCCT
GGRCAGAGAACGGTGAGTTAAACAAAACTCCCAAGAAATAATTGATATTG
TGGTGTTTCAAATTTTTTGATTGTGCATCTATATAATTTTGAAATGCTGT
TGTGTCCTAGTTGACAGAATAAATACTTTTACTGCTTCTTTATAGGCTGT
ATTTAGAAGGTATTTGCGCCCAGAAAAGGATTACTTGTCATTTTCTCTTC
TATATAACAACGGTGAACGAACACTTGATCTGGTAAGTAAAATCAAGTAT
TAGTTTCAAATTTTTCTGCTACGGTGAGTTTAGACGAAAAGTWTAAACTC
AGCAATCATCTTTATAGATCTGCAAGGACAAAGCTGAGGCAGAGGTATGG
TTTGCTGGCCTYAAGGCACTAATTACTTCAGGACAACAACGTAGTAGACG
TACTAAGAGTGATATTTATGATGTAAGTTTCTATTTTAACAAAACGCATT
TATAACTGCTTATATTTGTACTTGTTTTTATGGTTCCTAGTTCTTTCTTA
TCGTTCGAATGGTTAATTTTGTAATGACTATAATAAATTAGTTGATACGA
GTTTTTGCCCTCAAAAAGGGCTGAATATTTCTTGTGAAATTACCTGCAGA
TGGTGAGAAAATATCTGCCACACAATTGCATGACAATCATTATATATTTA
TTTGTTTGTCATTTAGTCTGCTGTTTACTAAATTATGAACATTCATCGGC
ATGAAATAAAAAAGGAAACTTTTAMGCAATATGTATTAGAGTTACGTATT
CTAGTAAAAARTAKATGTACCATTTACTGATACAATAAATTGTGGCAAAT
TATTACAACCCTGAGAYGACAGATACAGGTTTTTGCCTCTCAAGCCTTTG
AAAAAAAYATACGGAAAACTATCCAGGAAGTAGAGTGGTATGGGATGTCT
AGCAATTGCAGATGAAACWTAGCCCTCACCATATTCAGGAACATTAATTT
TTCTTGGAGATAAGATTTGACATATGGAGCCGCTGGAATTTAAGTTATGT
AAATAAAAGAATAGTTAAAATTCCATGAAATCGAYAACTATGAACTGGAA
CTATGAACTGGAGATTCTGTAAACATACAATTATATACAATTTAGAAAAT
TATTARTGCATTAACATATTTGGTAGTTTCCTTCATATGATTCATGGATT
ATGAGAAACTGCCAGCACTTATATTGACAAAGTAAATGTGGCGCAARTGT
CTTGATCCACTCAGAATTGTTCTGCRTTAATATGTTTTCAGAAGATTCAA
TGTAGTTGCTTGCTTTACTTTCAGYTGCAAGACTGTGCTGAATCTGTTAA
TGGTCGTCCTTTTGGTGCGGCCTTAGAKTTCACTTCRAGCATTGCCCGTG
GTAGGGGATCTGTTGATTCTCGTGAATCAGTGAATTTTTCAGGCTCAGAT
GTGGGTTCAGAACSTGCAAATATGCAACTAAGAACAAGTGCAGGAGATGG
TTTTCGAATTAGTGTTTCAAGCACTCCTAGCTGTTCAAGTGGAGGGTCTG
GACCTGATGACATTGAATCACTAGGAGATGTTTATGTTTGGGGAGAGATC
TGGTCTGATGGAAATGGACCTGATGGGTCCACGAATTCAATCCCTACAAA
AACCRATGTGCTGATTCCAAAGCCCTTGGAGTCGAATGTTGTTCTTGATG
TTCAGCAGATAGCTTGTGGTGTGCGACATGTTGCTCTTGTAACAAGGCAA
GGGGAGGTTTTTACCTGGGGAGAGGAATCTGGGGGAAGACTTGGTCATGG
GATTGATAGAGACTTTAGTTGTCCTCGCCTTGTTGAGTTCCTCGCAATTA
ATAACATTGAATTTGTTGCATGTGGTGAGTACCACACATGTGCTGTATCT
ACGTCAGGTGATTTGTTTACGTGGGGTGATGGTACACATAATGCTGGACT
TCTTGGTCTTGGAACAGATGTTAGCCACTGGATACCTAAAAGGGTTACCG
GTCCTTTAGAAGGACTTCAGGTTYTATCTGTTGCGTGTGGCACGTGGCAT
TCAGCTTTGGCAACTTCAAATGGAAAGCTGTTCACGTTTGGAGATGGAGC
GTTTGGTGTTTTGGGCCATGGAGATCGAGAGAGTGTTCTGTATCCAAGGG
ATGTACAGTTGTTGAATGGACTAAAGACGATAAAAGTAGCATGCGGAGTT
TGGCATACTGCAGCAATTGTAGAGGTTATGGGCCAGTCTRGTGCAAATGC
TTCATCTCGTAAGTTGTTCACCTGGGGTGATGGTGACAAACATYGTTTGG
GTCACRGAAGCAAGGAAACTTATCTGCTTCCCACCTGTGTCTCTTCACTT
ATTGACTATAATTTCCACCAGCTAGCATGTGGACACACTATGACTATTGC
CCTCACCACATCAGGTCATGTGTTTACCATGGGCGGAACTGCTTATGGTC
AGCTAGGCAATCCAACTTSTGACGGGAAAGTACCTTGCTTAGTACAGGAT
CGATTGATTGGTGAGTTTGTCGAAGAAATATCTTGTGGGTCATATCATGT
TGCYGTCCTGACATCAAGAAGTGAAGTGTTCACTTGGGGAAGAGGGGCTA
ATGGAAGACTGGGACACGGGGACACAGAAGACMGGAAAACTCCAACTTTG
GTTGAAGCCCTGAAAGATAGGCATGTGAAAAGCATATCGTGTGGCTCAAA
CTTCACATCTAGTATATGCATCCATAAGTGGGTCTCTGGAGCTGATCAAT
CAATTTGTTCAGGTTGTCGACAGACATTTGGTTTTACKAGAAAGAGGCAT
AACTGTTATAACTGTGGACTAGTCCATTGCCATGCTTGTAGTTCCAAAAA
AGCACTGAGGGCAGCATTGGCCCCGACTCCTGGAAAACCACACCGTGTAT
GTGATGCTTGTTATGCAAAACTTAAAGCTGCTGAGGCTGGTAATGCTTCC
AATGTTAGTAGGAGATCTAYGATCACACGCTCAATGGATAGCAGGGATTT
TCTAAATAGGGGAGAGGTGAAATCTTCAAGGATTCTTCTCTCTYCCACTA
CAGAACCCGTTAAMTACCTTGAGATCAAGTCCATGAAGCCTGGGGGTGTC
AGATCYGAGTCCCCTTCTATAGTCAGGGCTTCCCAAGTTCCATCCCTTTT
ACCACTAAAAGATATTGCGTTTCCAAGTTCATTGAGTGCACTTCAAAACG
CTTTGAAGCCTGTCATGACAATGCTGCCTCAGCCCAATTCAAGATCTACT
TCACCATATTCGAGGAGACCTAGTCCTCCCCGGTCTACAACTCCTATATT
CTCTAGGAGTGTTATYGACAGTCTTAAGAGGACAAATGACACTCTGACTC
AAGAAGTRCTGAAGTTGCAAAACCAGGTACTATTTTACACCTTTYGAAAR
TTMACATTTTTGGTTGCGTCATTATATTGGCTTGTGGTATAGAAATGTCA
AAACCAAGAYGCCTTTCTTTAGGTAAACTTTCCTCTCTTTACCTCAGGTT
AAAAGTCTGAAGCAGAAGTGTGATGCTCAAGATGTAGAGATTCAAAAACT
AAATAAGCATGCCAAAGAAGCTGGCTCATTAGCCAATGAACAATACTCTA
AGTGCAGAGCTGCCAAAGAACTTGTCAAGTCCATCGCTGAACAGGTTTAT
AAAACTTACTCAATATTACAATGTCACTCTTTCTAAYCRTTCTTTGTGGC
ACGAACATTTCCGTTGACAGCATAACAATGACGGGGAAAAGAAAATCTAC
TCTTTTTATGGCCCTGCCATTCAGTTATCGGTGAAATATGCTGATGTTCT
GTGTGCTTTCTGTCCTTTCTTTATCTTGCAGATKAGGGGGTGGGAAGACA
AGATACCTCCTGAGATTTTTGACAGTGATACTTTCAAAGCATTGCGTACG
CAAGCTAAAGATTTTATGAACATGARTATTGGAAGCTCAAGCTCAGAGCT
AGGCCAACACTATGMAGCCGATAGAACTTCCTTGGTTGTTGAGTCTTCTA
GAATGGACGACAATAGAGCAGACGACTCTGCAGAGGCTGAACCTCAAAAC
AGCTCAGAAAACCGCTCAAGGTCACCTGAATCATCAACATTGAGGACAGA
AGACAACAGAGCAGAAGACTTTGCGGAGGCTGAACCTCAAAACAGCTCAG
AAAACCGCTTGAGGTCACCTGAATCATCAACGTCGCATAGAGGACAAAAG
GAAGTCATTGAACAATTTGAACCGGGCGTTTATGTAACTCTCCTTCAACA
ACAAAATGGTACTAGGATTTTTAGGCGTGTTAAATTCAGGTAAATATTTG
ATCTTATAACATTCAGTAATTATATGTTTGTGTTAGACGGCCACTGGACC
CTCGAGCTTTTGGGGTTCAGTGGTTGTCTAACACTGTATCAGAGCTCTTG
TTGCACGAGGTCCTGAGTTCAAAACTTCCGATCCTCATTCCCCACTGCTT
TCTTCATTTTCAAGCTGCACACTGGGATTGCACCTATGTGTTTCTGTGTC
TTCATTCTTTGCCTCTCCACGTGCAGAATGTGGCTGCACGTGAGTGAACG
TGTTAGCTAGATATATAATGTTGACTCGTTATCTAACAGCTTAAACTTAT
GGGGTTCAGTGTCTACGATGCCATATTACAACTAATGGATCTCAAAAGTT
TAAGCTGTTTGCAAACTGATCAACAATGTATATCAAGCTTACGATCTACA
CATGTACCCGTACTAATTGAAACAAAACTTGTTATAAATTATTATCAGAA
AGCCATTTTGTTTTGTGTTTCGTTTATTTTCCATATGCTAACTTTGTTTA
TGATAAGCGTAACACACAACAAAGTCTTGGATCATTTCAATGCAGTTCTC
TTCTAATTTTCTCACACCGGTCTCAAATATTTTCTGCAGCAAACGAAAGT
TTAGTTCGGAACAGGCAGAAGCATGGTGGAAAAATAACAAAGATAGGCTG
CTTAGGAGATATAGTCAGCCGAGTGCAAGTCCTGCTCCGAGTGTACCACC
ACCCAGCAGTCCTGTACCGCCGGAGGAAAACAGCGAGGCAGCCGCAGCTT
CCCCGACTTAGTTTCATAACTTAG

Coding sequence (CDS) from alignment at MDC017852.266:15558..26931+

>MDP0000232174 ID=MDP0000232174; Name=MDP0000232174; organism=Malus x domestica; type=CDS; length=4884bp; location=Sequence derived from: MDC017852.266:15558..26931+ (Malus x domestica
ATGGCATTGGCCTCGTGCTCCACCACCTTTCTCTGCAACCACGCAGCGGC
AGCGGCACCGTGGTCACATCCCAGAACTAGACCCAGAAGCTTCCGGGGGC
GGAGGAGCTCCATTATCAAAGCAACCGTCACCACCGGTGCCAAGCAAAAC
CTGAAGACCCCATTGCAGTACAGGAAGCTCGGGGACTCGGACCTTGTAAT
TAGYGAAATCACTCTCGGAACCATGACATTCGGCGAGCAAAACACAGAGA
AAGAAGCTCATGAGATTCTCAGCTACGCATTTGAAAATGGGATTAACGCA
TTGGACWCTGCCGAGGCTTACCCAATTCCCATGAAGAAGGAGACACAGGG
GAGCACTGATCGCTACATTGCCAGTTGGCTCAAGTCTCAACCCCGTGATA
AGGTTGTTTTGGCAACAAARGTAGCTGGCTATTCAGAGAGGTCAAGTYAT
TTGCGTGACAATGCCACGGTTTTGCGGGTGGATGCAGCAAACATTAGAGA
AAGTGTAGAGAAAAGCCTAAAGCGCCTTGGGACAGATTACATTGATTTAA
TACAAATTCATTGGCCAGATCGCTATGTGCCATTATTTGGTGGGTATTCA
TATGATTTTTCAAAATGGAGGTCAAGTGTACCATTCGTGGARCAACTAAA
GGCTTTTCAAGAACTCATTGACGAAGGAAAGGTACGCTACATTGGTGTTT
CTAATGAGACTTCATATGGAGTGATGGAATTTGTACATGCAGCTAAAGTT
GAAGGGCTACCAAAGATAGTCAGTATCCAAAACAATTACAGTCTTCTAGT
TAGAACTCATTTTGAAATTGACCTTGTTGAAGTCTGCCACCCACAAAATT
RCAACATTGGCTTGYTGGCTTATTCTCCACTGGCTGGTGGATCACTGAGT
GGGAAGTACATAGATAGCWCTTCCGAAGCTTCAAAAAAAGGGAGGCTAAA
CCTCTTCCCCGGCTACATGGAAAGATATAACAAATCTTCTGCTAGGGAAG
CAACAATAAAGTACATCGAGCTAGGCAAGAAGTACGGGCTAACTCCAGTT
CAGCTTGCACTTGGATTTGTACGGGACCGTCCATTTGTGACAAGTTCAAT
CGTTGGTGCAACTTCTGTCACCCAACTGAAGGAAGATGTTGATGCTTTTG
TGTTGACTGAGAGGCCTTTACCACAAGAAAAGGATACTAGGAATTTTGAT
GAGAGGCCAAACYGGGAGAAAGCATAKGCATCTATGAAGACTGGTGAAGG
GAAGTCGCCGATGCAGTTGTCGGTTGAGCTTGCTTCTTCTTCGGCGTTTA
ATTCCTTACGAAAATTTCAGATGGAATGGCAGATCCTGCTAGCTATGGGA
ATCATGAGCGTGATATTGAACAAGTCRGTTTCCYATCACYGCCCTCTTTT
CTTTTCCTTTAGATTATTTGGTGTTTGGTTTTGTTTGCCTAGAAAACAAA
GAGACCTCGTACATTTTCGGGCACTCACTGCATTAAAAAAAGGTTCCCAG
TTAATCAAGTATAGCCGGAAAGGGAAGCCAAAACTTTGTTCATTCAGAAT
TTCTACTGATGAAACTACACTAATCTGGTATTCACATGGAGAAGAACGAA
CTGTGAAATTAGCTTCTGTCTCTCGAATTATCCCTGGRCAGAGAACGGCT
GTATTTAGAAGGTATTTGCGCCCAGAAAAGGATTACTTGTCATTTTCTCT
TCTATATAACAACGGTGAACGAACACTTGATCTGATCTGCAAGGACAAAG
CTGAGGCAGAGGTATGGTTTGCTGGCCTYAAGGCACTAATTACTTCAGGA
CAACAACGTAGTAGACGTACTAAGAGTGATATTTATGATYTGCAAGACTG
TGCTGAATCTGTTAATGGTCGTCCTTTTGGTGCGGCCTTAGAKTTCACTT
CRAGCATTGCCCGTGGTAGGGGATCTGTTGATTCTCGTGAATCAGTGAAT
TTTTCAGGCTCAGATGTGGGTTCAGAACSTGCAAATATGCAACTAAGAAC
AAGTGCAGGAGATGGTTTTCGAATTAGTGTTTCAAGCACTCCTAGCTGTT
CAAGTGGAGGGTCTGGACCTGATGACATTGAATCACTAGGAGATGTTTAT
GTTTGGGGAGAGATCTGGTCTGATGGAAATGGACCTGATGGGTCCACGAA
TTCAATCCCTACAAAAACCRATGTGCTGATTCCAAAGCCCTTGGAGTCGA
ATGTTGTTCTTGATGTTCAGCAGATAGCTTGTGGTGTGCGACATGTTGCT
CTTGTAACAAGGCAAGGGGAGGTTTTTACCTGGGGAGAGGAATCTGGGGG
AAGACTTGGTCATGGGATTGATAGAGACTTTAGTTGTCCTCGCCTTGTTG
AGTTCCTCGCAATTAATAACATTGAATTTGTTGCATGTGGTGAGTACCAC
ACATGTGCTGTATCTACGTCAGGTGATTTGTTTACGTGGGGTGATGGTAC
ACATAATGCTGGACTTCTTGGTCTTGGAACAGATGTTAGCCACTGGATAC
CTAAAAGGGTTACCGGTCCTTTAGAAGGACTTCAGGTTYTATCTGTTGCG
TGTGGCACGTGGCATTCAGCTTTGGCAACTTCAAATGGAAAGCTGTTCAC
GTTTGGAGATGGAGCGTTTGGTGTTTTGGGCCATGGAGATCGAGAGAGTG
TTCTGTATCCAAGGGATGTACAGTTGTTGAATGGACTAAAGACGATAAAA
GTAGCATGCGGAGTTTGGCATACTGCAGCAATTGTAGAGGTTATGGGCCA
GTCTRGTGCAAATGCTTCATCTCGTAAGTTGTTCACCTGGGGTGATGGTG
ACAAACATYGTTTGGGTCACRGAAGCAAGGAAACTTATCTGCTTCCCACC
TGTGTCTCTTCACTTATTGACTATAATTTCCACCAGCTAGCATGTGGACA
CACTATGACTATTGCCCTCACCACATCAGGTCATGTGTTTACCATGGGCG
GAACTGCTTATGGTCAGCTAGGCAATCCAACTTSTGACGGGAAAGTACCT
TGCTTAGTACAGGATCGATTGATTGGTGAGTTTGTCGAAGAAATATCTTG
TGGGTCATATCATGTTGCYGTCCTGACATCAAGAAGTGAAGTGTTCACTT
GGGGAAGAGGGGCTAATGGAAGACTGGGACACGGGGACACAGAAGACMGG
AAAACTCCAACTTTGGTTGAAGCCCTGAAAGATAGGCATGTGAAAAGCAT
ATCGTGTGGCTCAAACTTCACATCTAGTATATGCATCCATAAGTGGGTCT
CTGGAGCTGATCAATCAATTTGTTCAGGTTGTCGACAGACATTTGGTTTT
ACKAGAAAGAGGCATAACTGTTATAACTGTGGACTAGTCCATTGCCATGC
TTGTAGTTCCAAAAAAGCACTGAGGGCAGCATTGGCCCCGACTCCTGGAA
AACCACACCGTGTATGTGATGCTTGTTATGCAAAACTTAAAGCTGCTGAG
GCTGGTAATGCTTCCAATGTTAGTAGGAGATCTAYGATCACACGCTCAAT
GGATAGCAGGGATTTTCTAAATAGGGGAGAGGTGAAATCTTCAAGGATTC
TTCTCTCTYCCACTACAGAACCCGTTAAMTACCTTGAGATCAAGTCCATG
AAGCCTGGGGGTGTCAGATCYGAGTCCCCTTCTATAGTCAGGGCTTCCCA
AGTTCCATCCCTTTTACCACTAAAAGATATTGCGTTTCCAAGTTCATTGA
GTGCACTTCAAAACGCTTTGAAGCCTGTCATGACAATGCTGCCTCAGCCC
AATTCAAGATCTACTTCACCATATTCGAGGAGACCTAGTCCTCCCCGGTC
TACAACTCCTATATTCTCTAGGAGTGTTATYGACAGTCTTAAGAGGACAA
ATGACACTCTGACTCAAGAAGTRCTGAAGTTGCAAAACCAGGTTAAAAGT
CTGAAGCAGAAGTGTGATGCTCAAGATGTAGAGATTCAAAAACTAAATAA
GCATGCCAAAGAAGCTGGCTCATTAGCCAATGAACAATACTCTAAGTGCA
GAGCTGCCAAAGAACTTGTCAAGTCCATCGCTGAACAGATKAGGGGGTGG
GAAGACAAGATACCTCCTGAGATTTTTGACAGTGATACTTTCAAAGCATT
GCGTACGCAAGCTAAAGATTTTATGAACATGARTATTGGAAGCTCAAGCT
CAGAGCTAGGCCAACACTATGMAGCCGATAGAACTTCCTTGGTTGTTGAG
TCTTCTAGAATGGACGACAATAGAGCAGACGACTCTGCAGAGGCTGAACC
TCAAAACAGCTCAGAAAACCGCTCAAGGTCACCTGAATCATCAACATTGA
GGACAGAAGACAACAGAGCAGAAGACTTTGCGGAGGCTGAACCTCAAAAC
AGCTCAGAAAACCGCTTGAGGTCACCTGAATCATCAACGTCGCATAGAGG
ACAAAAGGAAGTCATTGAACAATTTGAACCGGGCGTTTATGTAACTCTCC
TTCAACAACAAAATGGTACTAGGATTTTTAGGCGTGTTAAATTCAGACGG
CCACTGGACCCTCGAGCTTTTGGGGTTCAGTGGTTGTCTAACACTGTATC
AGAGCTCTTGTTGCACGAGGTCCTGAGTTCAAAACTTCCGATCCTCATTC
CCCACTGCTTTCTTCATTTTCAAGCTGCACACTGGGATTGCACCTATGTG
TTTCTGTGTCTTCATTCTTTGCCTCTCCACGTGCAGAATGTGGCTGCACC
AAACGAAAGTTTAGTTCGGAACAGGCAGAAGCATGGTGGAAAAATAACAA
AGATAGGCTGCTTAGGAGATATAGTCAGCCGAGTGCAAGTCCTGCTCCGA
GTGTACCACCACCCAGCAGTCCTGTACCGCCGGAGGAAAACAGCGAGGCA
GCCGCAGCTTCCCCGACTTAGTTTCATAACTTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000306	Znf_FYVE
IPR000408	Reg_chr_condens
IPR009091	RCC1/BLIP-II
IPR011011	Znf_FYVE_PHD
IPR011993	PH-like_dom_sf
IPR013083	Znf_RING/FYVE/PHD
IPR013591	Brevis_radix_dom
IPR017455	Znf_FYVE-rel
IPR023210	NADP_OxRdtase_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding